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All interfaces > All interologs > Interface groups > group138 > 1VQ8_H_0 vs 6AZ3_N_2

Interface analysis


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Common contacts -

1VQ8_H
1VQ8_0
6AZ3_N
6AZ3_2
Conserved?
H:114 [ARG] 0:2282 [U] N:116 [ARG] 2:1045 [U] ✔
H:114 [ARG] 0:2283 [G] N:116 [ARG] 2:1046 [G] ✔
H:114 [ARG] 0:2285 [G] N:116 [ARG] 2:1048 [G] ✔
H:114 [ARG] 0:2287 [C] N:116 [ARG] 2:1050 [C] ✔
H:114 [ARG] 0:2288 [G] N:116 [ARG] 2:1051 [G] ✔
H:114 [ARG] 0:2309 [C] N:116 [ARG] 2:1072 [C] ✔
H:114 [ARG] 0:2531 [U] N:116 [ARG] 2:1304 [U] ✔
H:19 [TYR] 0:2312 [G] N:22 [PHE] 2:1075 [A] ✔
H:75 [LYS] 0:2504 [A] N:78 [LYS] 2:1277 [A] ✔
H:116 [ALA] 0:2310 [G] N:118 [ALA] 2:1073 [G] ✔
H:1 [LYS] 0:2494 [G] N:4 [ARG] 2:1267 [G] ✔
H:1 [LYS] 0:2495 [U] N:4 [ARG] 2:1268 [U] ✔
H:117 [PHE] 0:2310 [G] N:119 [PHE] 2:1073 [G] ✔
H:117 [PHE] 0:2311 [A] N:119 [PHE] 2:1074 [C] ✔
H:3 [ALA] 0:2520 [G] N:6 [SER] 2:1293 [U] ✔
H:3 [ALA] 0:2521 [A] N:6 [SER] 2:1294 [C] ✔
H:156 [LYS] 0:2502 [C] N:158 [LYS] 2:1275 [C] ✔
H:156 [LYS] 0:2517 [A] N:158 [LYS] 2:1290 [A] ✔
H:156 [LYS] 0:2518 [C] N:158 [LYS] 2:1291 [C] ✔
H:156 [LYS] 0:2519 [C] N:158 [LYS] 2:1292 [G] ✔
H:156 [LYS] 0:2520 [G] N:158 [LYS] 2:1293 [U] ✔
H:61 [SER] 0:2519 [C] N:64 [ALA] 2:1292 [G] ✔
H:61 [SER] 0:2520 [G] N:64 [ALA] 2:1293 [U] ✔
H:157 [ILE] 0:2519 [C] N:159 [PHE] 2:1292 [G] ✔
H:157 [ILE] 0:2520 [G] N:159 [PHE] 2:1293 [U] ✔
H:152 [ARG] 0:2502 [C] N:154 [ARG] 2:1275 [C] ✔
H:152 [ARG] 0:2503 [A] N:154 [ARG] 2:1276 [A] ✔
H:152 [ARG] 0:2504 [A] N:154 [ARG] 2:1277 [A] ✔
H:64 [ALA] 0:2518 [C] N:67 [ALA] 2:1291 [C] ✔
H:64 [ALA] 0:2519 [C] N:67 [ALA] 2:1292 [G] ✔
H:4 [SER] 0:2494 [G] N:7 [ARG] 2:1267 [G] ✔
H:4 [SER] 0:2521 [A] N:7 [ARG] 2:1294 [C] ✔
H:158 [THR] 0:2520 [G] N:160 [PRO] 2:1293 [U] ✔
H:158 [THR] 0:2521 [A] N:160 [PRO] 2:1294 [C] ✔
H:2 [PRO] 0:2494 [G] N:5 [PRO] 2:1267 [G] ✔
H:2 [PRO] 0:2495 [U] N:5 [PRO] 2:1268 [U] ✔
H:115 [ALA] 0:2283 [G] N:117 [GLY] 2:1046 [G] ✔
H:115 [ALA] 0:2309 [C] N:117 [GLY] 2:1072 [C] ✔
H:115 [ALA] 0:2310 [G] N:117 [GLY] 2:1073 [G] ✔
H:71 [ARG] 0:2504 [A] N:74 [LYS] 2:1277 [A] ✔
H:155 [ASN] 0:2501 [G] N:157 [MET] 2:1274 [C] ✔
H:155 [ASN] 0:2502 [C] N:157 [MET] 2:1275 [C] ✔
H:155 [ASN] 0:2519 [C] N:157 [MET] 2:1292 [G] ✔
H:155 [ASN] 0:2520 [G] N:157 [MET] 2:1293 [U] ✔
H:60 [GLY] 0:2519 [C] N:63 [GLU] 2:1292 [G] ✔
H:151 [ARG] 0:2502 [C] N:153 [ARG] 2:1275 [C] ✔
H:151 [ARG] 0:2503 [A] N:153 [ARG] 2:1276 [A] ✔
H:58 [ARG] 0:2520 [G] N:61 [ALA] 2:1293 [U] ✔
H:5 [MET] 0:2494 [G] N:8 [CYS] 2:1267 [G] ✔
H:7 [ARG] 0:2521 [A] N:10 [ARG] 2:1294 [C] ✔
H:7 [ARG] 0:2522 [G] N:10 [ARG] 2:1295 [G] ✔
H:113 [MET] 0:2283 [G] N:115 [MET] 2:1046 [G] ✔
H:113 [MET] 0:2310 [G] N:115 [MET] 2:1073 [G] ✔
H:113 [MET] 0:2530 [C] N:115 [MET] 2:1303 [A] ✔
H:113 [MET] 0:2531 [U] N:115 [MET] 2:1304 [U] ✔
H:112 [GLY] 0:2530 [C] N:114 [GLY] 2:1303 [A] ✔
H:112 [GLY] 0:2531 [U] N:114 [GLY] 2:1304 [U] ✔
H:114 [ARG] 0:2310 [G] N:116 [ARG] 2:1073 [G] ❌ 6AZ3_N_2
H:19 [TYR] 0:2311 [A] N:22 [PHE] 2:1074 [C] ❌ 6AZ3_N_2
H:19 [TYR] 0:2363 [G] N:22 [PHE] 2:1126 [G] ❌ 6AZ3_N_2
H:116 [ALA] 0:2309 [C] N:118 [ALA] 2:1072 [C] ❌ 6AZ3_N_2
H:1 [LYS] 0:2520 [G] N:4 [ARG] 2:1293 [U] ❌ 6AZ3_N_2
H:156 [LYS] 0:2501 [G] N:158 [LYS] 2:1274 [C] ❌ 6AZ3_N_2
H:2 [PRO] 0:2521 [A] N:5 [PRO] 2:1294 [C] ❌ 6AZ3_N_2
H:71 [ARG] 0:2517 [A] N:74 [LYS] 2:1290 [A] ❌ 6AZ3_N_2
H:112 [GLY] 0:2283 [G] N:114 [GLY] 2:1046 [G] ❌ 1VQ8_H_0
H:117 [PHE] 0:2312 [G] N:119 [PHE] 2:1075 [A] ❌ 1VQ8_H_0
H:18 [GLU] 0:2363 [G] N:21 [ARG] 2:1126 [G] ❌ 1VQ8_H_0
H:60 [GLY] 0:2518 [C] N:63 [GLU] 2:1291 [C] ❌ 1VQ8_H_0
H:4 [SER] 0:2522 [G] N:7 [ARG] 2:1295 [G] ❌ 1VQ8_H_0
H:114 [ARG] 0:2284 [G] N:116 [ARG] 2:1047 [OMG] ❌ 1VQ8_0:2284 no longer at interface
H:12 [PRO] 0:2299 [G] N:15 [LYS] 2:1062 [U] ❌ 1VQ8_0:2299 no longer at interface
H:12 [PRO] 0:2300 [A] N:15 [LYS] 2:1063 [A] ❌ 1VQ8_0:2300 no longer at interface
H:18 [GLU] 0:2362 [A] N:21 [ARG] 2:1125 [A] ❌ 1VQ8_0:2362 no longer at interface
H:4 [SER] 0:2523 [U] N:7 [ARG] 2:1296 [C] ❌ 1VQ8_0:2523 no longer at interface
H:4 [SER] 0:2524 [G] N:7 [ARG] 2:1297 [U] ❌ 1VQ8_0:2524 no longer at interface
H:75 [LYS] 0:2505 [G] N:78 [LYS] 2:1278 [G] ❌ 1VQ8_0:2505 no longer at interface
H:27 [LYS] 0:2519 [C] N:30 [LYS] 2:1292 [G] ❌ 6AZ3_N:30 no longer at interface
H:14 [TYR] 0:2311 [A] N:17 [TYR] 2:1074 [C] ❌ 6AZ3_N:17 no longer at interface
H:97 [GLU] 0:2494 [G] N:99 [ILE] 2:1267 [G] ❌ 6AZ3_N:99 no longer at interface
H:68 [SER] 0:2504 [A] N:71 [GLN] 2:1277 [A] ❌ 1VQ8_H:68 no longer at interface
H:68 [SER] 0:2503 [A] N:71 [GLN] 2:1276 [A] ❌ 1VQ8_H:68 no longer at interface
H:72 [HIS] 0:2504 [A] N:75 [TYR] 2:1277 [A] ❌ 1VQ8_H:72 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.81 1.6 0.39 0.91 0.81 0.87 0.77 0.89 0.82 0.30 0.50


Other pairs involving 1VQ8_H_0 or 6AZ3_N_2

Total number of entries: 22

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_N_2 6S0Z_K_A 0.77 0.78 2.44 0.13 Ribosomal protein L10e compare
6AZ3_N_2 7RYG_L_A 0.76 0.78 2.39 0.16 Ribosomal protein L10e compare
6AZ3_N_2 7K00_l_a 0.72 0.79 2.53 0.13 Ribosomal protein L10e compare
6AZ3_N_2 7N1P_LP_23 0.76 0.8 2.11 0.16 Ribosomal protein L10e compare
6AZ3_N_2 7O7Y_BI_B5 0.88 0.92 1.34 0.77 Ribosomal protein L10e Eukaryotic large subunit ribosomal RNA compare
6AZ3_N_2 7PJS_M_A 0.75 0.8 2.19 0.16 Ribosomal protein L10e compare
4Y4O_1Q_1A 6AZ3_N_2 0.77 0.79 2.36 0.16 Ribosomal protein L10e compare
4YBB_DN_DA 6AZ3_N_2 0.74 0.8 2.18 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 7K00_l_a 0.62 0.9 2.5 0.14 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_1 0.65 0.77 1.62 0.24 Ribosomal protein L10e compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7N1P_LP_23 0.63 0.91 2.2 0.16 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_2 0.89 0.81 1.6 0.39 Ribosomal protein L10e compare
1VQ8_H_0 7RYG_L_A 0.62 0.91 3.04 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7PJS_M_A 0.64 0.91 2.21 0.16 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
1VQ8_H_0 1YHQ_H_0 1.00 1.0 0.26 1.0 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 6S0Z_K_A 0.67 0.92 2.67 0.18 Ribosomal protein L10e compare
1YHQ_H_0 6AZ3_N_2 0.87 0.81 1.64 0.35 Ribosomal protein L10e compare
1JJ2_H_0 6AZ3_N_2 0.88 0.81 1.64 0.39 Ribosomal protein L10e compare
1JJ2_H_0 1VQ8_H_0 0.97 1.0 0.39 0.66 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare