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All interfaces > All interologs > Interface groups > group138 > 1VQ8_H_0 vs 6S0Z_K_A

Interface analysis


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Common contacts -

1VQ8_H
1VQ8_0
6S0Z_K
6S0Z_A
Conserved?
H:114 [ARG] 0:2283 [G] K:84 [GLY] A:2277 [G] ✔
H:114 [ARG] 0:2309 [C] K:84 [GLY] A:2302 [C] ✔
H:114 [ARG] 0:2310 [G] K:84 [GLY] A:2303 [G] ✔
H:19 [TYR] 0:1007 [A] K:9 [TYR] A:956 [A] ✔
H:19 [TYR] 0:1008 [C] K:9 [TYR] A:957 [C] ✔
H:19 [TYR] 0:2311 [A] K:9 [TYR] A:2304 [G] ✔
H:19 [TYR] 0:2312 [G] K:9 [TYR] A:2305 [A] ✔
H:96 [ARG] 0:1055 [G] K:75 [THR] A:1000 [G] ✔
H:96 [ARG] 0:1056 [U] K:75 [THR] A:1001 [A] ✔
H:18 [GLU] 0:964 [G] K:8 [LYS] A:914 [G] ✔
H:116 [ALA] 0:1055 [G] K:86 [GLY] A:1000 [G] ✔
H:116 [ALA] 0:2309 [C] K:86 [GLY] A:2302 [C] ✔
H:116 [ALA] 0:2310 [G] K:86 [GLY] A:2303 [G] ✔
H:117 [PHE] 0:1054 [G] K:87 [LYS] A:999 [U] ✔
H:117 [PHE] 0:1055 [G] K:87 [LYS] A:1000 [G] ✔
H:117 [PHE] 0:2310 [G] K:87 [LYS] A:2303 [G] ✔
H:117 [PHE] 0:2311 [A] K:87 [LYS] A:2304 [G] ✔
H:98 [ASN] 0:1055 [G] K:77 [LYS] A:1000 [G] ✔
H:98 [ASN] 0:1056 [U] K:77 [LYS] A:1001 [A] ✔
H:88 [ARG] 0:1002 [G] K:67 [LYS] A:951 [G] ✔
H:88 [ARG] 0:1003 [U] K:67 [LYS] A:952 [A] ✔
H:160 [SER] 0:1133 [A] K:128 [LYS] A:1073 [A] ✔
H:160 [SER] 0:1134 [G] K:128 [LYS] A:1074 [G] ✔
H:156 [LYS] 0:2502 [C] K:124 [LYS] A:2494 [C] ✔
H:156 [LYS] 0:2517 [A] K:124 [LYS] A:2509 [A] ✔
H:156 [LYS] 0:2518 [C] K:124 [LYS] A:2510 [C] ✔
H:156 [LYS] 0:2519 [C] K:124 [LYS] A:2511 [G] ✔
H:156 [LYS] 0:2520 [G] K:124 [LYS] A:2512 [G] ✔
H:61 [SER] 0:2519 [C] K:46 [GLN] A:2511 [G] ✔
H:61 [SER] 0:2520 [G] K:46 [GLN] A:2512 [G] ✔
H:92 [HIS] 0:965 [A] K:71 [HIS] A:915 [U] ✔
H:92 [HIS] 0:966 [U] K:71 [HIS] A:916 [U] ✔
H:92 [HIS] 0:1003 [U] K:71 [HIS] A:952 [A] ✔
H:92 [HIS] 0:1004 [C] K:71 [HIS] A:953 [C] ✔
H:90 [PHE] 0:966 [U] K:69 [PHE] A:916 [U] ✔
H:90 [PHE] 0:967 [U] K:69 [PHE] A:917 [U] ✔
H:157 [ILE] 0:2519 [C] K:125 [LEU] A:2511 [G] ✔
H:157 [ILE] 0:2520 [G] K:125 [LEU] A:2512 [G] ✔
H:152 [ARG] 0:2502 [C] K:120 [LEU] A:2494 [C] ✔
H:152 [ARG] 0:2503 [A] K:120 [LEU] A:2495 [A] ✔
H:64 [ALA] 0:2518 [C] K:49 [SER] A:2510 [C] ✔
H:64 [ALA] 0:2519 [C] K:49 [SER] A:2511 [G] ✔
H:158 [THR] 0:2520 [G] K:126 [PRO] A:2512 [G] ✔
H:158 [THR] 0:2521 [A] K:126 [PRO] A:2513 [G] ✔
H:118 [GLY] 0:1055 [G] K:88 [GLY] A:1000 [G] ✔
H:159 [PRO] 0:1134 [G] K:127 [VAL] A:1074 [G] ✔
H:115 [ALA] 0:2309 [C] K:85 [ALA] A:2302 [C] ✔
H:115 [ALA] 0:2310 [G] K:85 [ALA] A:2303 [G] ✔
H:71 [ARG] 0:2504 [A] K:56 [ARG] A:2496 [A] ✔
H:71 [ARG] 0:2517 [A] K:56 [ARG] A:2509 [A] ✔
H:155 [ASN] 0:1134 [G] K:123 [HIS] A:1074 [G] ✔
H:155 [ASN] 0:1135 [G] K:123 [HIS] A:1075 [G] ✔
H:155 [ASN] 0:2501 [G] K:123 [HIS] A:2493 [C] ✔
H:155 [ASN] 0:2502 [C] K:123 [HIS] A:2494 [C] ✔
H:155 [ASN] 0:2519 [C] K:123 [HIS] A:2511 [G] ✔
H:155 [ASN] 0:2520 [G] K:123 [HIS] A:2512 [G] ✔
H:154 [TYR] 0:1134 [G] K:122 [SER] A:1074 [G] ✔
H:111 [ASP] 0:2530 [C] K:81 [VAL] A:2522 [G] ✔
H:60 [GLY] 0:2519 [C] K:45 [ARG] A:2511 [G] ✔
H:151 [ARG] 0:2502 [C] K:119 [ARG] A:2494 [C] ✔
H:151 [ARG] 0:2503 [A] K:119 [ARG] A:2495 [A] ✔
H:58 [ARG] 0:2520 [G] K:43 [THR] A:2512 [G] ✔
H:131 [GLU] 0:1004 [C] K:101 [ARG] A:953 [C] ✔
H:113 [MET] 0:1055 [G] K:83 [MET] A:1000 [G] ✔
H:113 [MET] 0:1057 [A] K:83 [MET] A:1003 [A] ✔
H:113 [MET] 0:1058 [A] K:83 [MET] A:1004 [A] ✔
H:113 [MET] 0:2283 [G] K:83 [MET] A:2277 [G] ✔
H:113 [MET] 0:2530 [C] K:83 [MET] A:2522 [G] ✔
H:113 [MET] 0:2531 [U] K:83 [MET] A:2523 [C] ✔
H:97 [GLU] 0:1056 [U] K:76 [LYS] A:1001 [A] ✔
H:97 [GLU] 0:2494 [G] K:76 [LYS] A:2486 [A] ✔
H:112 [GLY] 0:2530 [C] K:82 [ARG] A:2522 [G] ✔
H:112 [GLY] 0:2531 [U] K:82 [ARG] A:2523 [C] ✔
H:114 [ARG] 0:2285 [G] K:84 [GLY] A:2279 [G] ❌ 6S0Z_K_A
H:114 [ARG] 0:2287 [C] K:84 [GLY] A:2281 [C] ❌ 6S0Z_K_A
H:114 [ARG] 0:2531 [U] K:84 [GLY] A:2523 [C] ❌ 6S0Z_K_A
H:96 [ARG] 0:1006 [A] K:75 [THR] A:955 [A] ❌ 6S0Z_K_A
H:96 [ARG] 0:1054 [G] K:75 [THR] A:999 [U] ❌ 6S0Z_K_A
H:116 [ALA] 0:1054 [G] K:86 [GLY] A:999 [U] ❌ 6S0Z_K_A
H:117 [PHE] 0:1006 [A] K:87 [LYS] A:955 [A] ❌ 6S0Z_K_A
H:16 [ARG] 0:1005 [A] K:6 [ARG] A:954 [A] ❌ 6S0Z_K_A
H:16 [ARG] 0:1007 [A] K:6 [ARG] A:956 [A] ❌ 6S0Z_K_A
H:16 [ARG] 0:1008 [C] K:6 [ARG] A:957 [C] ❌ 6S0Z_K_A
H:87 [LEU] 0:1002 [G] K:66 [ILE] A:951 [G] ❌ 6S0Z_K_A
H:156 [LYS] 0:2501 [G] K:124 [LYS] A:2493 [C] ❌ 6S0Z_K_A
H:90 [PHE] 0:1002 [G] K:69 [PHE] A:951 [G] ❌ 6S0Z_K_A
H:90 [PHE] 0:1003 [U] K:69 [PHE] A:952 [A] ❌ 6S0Z_K_A
H:157 [ILE] 0:1133 [A] K:125 [LEU] A:1073 [A] ❌ 6S0Z_K_A
H:152 [ARG] 0:2504 [A] K:120 [LEU] A:2496 [A] ❌ 6S0Z_K_A
H:158 [THR] 0:1133 [A] K:126 [PRO] A:1073 [A] ❌ 6S0Z_K_A
H:118 [GLY] 0:1054 [G] K:88 [GLY] A:999 [U] ❌ 6S0Z_K_A
H:159 [PRO] 0:1133 [A] K:127 [VAL] A:1073 [A] ❌ 6S0Z_K_A
H:115 [ALA] 0:2283 [G] K:85 [ALA] A:2277 [G] ❌ 6S0Z_K_A
H:154 [TYR] 0:1133 [A] K:122 [SER] A:1073 [A] ❌ 6S0Z_K_A
H:154 [TYR] 0:1135 [G] K:122 [SER] A:1075 [G] ❌ 6S0Z_K_A
H:151 [ARG] 0:1135 [G] K:119 [ARG] A:1075 [G] ❌ 6S0Z_K_A
H:86 [THR] 0:1002 [G] K:65 [TRP] A:951 [G] ❌ 6S0Z_K_A
H:113 [MET] 0:1054 [G] K:83 [MET] A:999 [U] ❌ 6S0Z_K_A
H:113 [MET] 0:2310 [G] K:83 [MET] A:2303 [G] ❌ 6S0Z_K_A
H:131 [GLU] 0:1003 [U] K:101 [ARG] A:952 [A] ❌ 1VQ8_H_0
H:60 [GLY] 0:2518 [C] K:45 [ARG] A:2510 [C] ❌ 1VQ8_H_0
H:16 [ARG] 0:964 [G] K:6 [ARG] A:914 [G] ❌ 1VQ8_H_0
H:16 [ARG] 0:965 [A] K:6 [ARG] A:915 [U] ❌ 1VQ8_H_0
H:86 [THR] 0:967 [U] K:65 [TRP] A:917 [U] ❌ 1VQ8_H_0
H:86 [THR] 0:968 [G] K:65 [TRP] A:918 [G] ❌ 1VQ8_H_0
H:87 [LEU] 0:967 [U] K:66 [ILE] A:917 [U] ❌ 1VQ8_H_0
H:90 [PHE] 0:965 [A] K:69 [PHE] A:915 [U] ❌ 1VQ8_H_0
H:18 [GLU] 0:1007 [A] K:8 [LYS] A:956 [A] ❌ 1VQ8_H_0
H:18 [GLU] 0:1008 [C] K:8 [LYS] A:957 [C] ❌ 1VQ8_H_0
H:112 [GLY] 0:2285 [G] K:82 [ARG] A:2279 [G] ❌ 1VQ8_H_0
H:112 [GLY] 0:2287 [C] K:82 [ARG] A:2281 [C] ❌ 1VQ8_H_0
H:112 [GLY] 0:2283 [G] K:82 [ARG] A:2277 [G] ❌ 1VQ8_H_0
H:113 [MET] 0:2309 [C] K:83 [MET] A:2302 [C] ❌ 1VQ8_H_0
H:116 [ALA] 0:2311 [A] K:86 [GLY] A:2304 [G] ❌ 1VQ8_H_0
H:114 [ARG] 0:2282 [U] K:84 [GLY] A:2276 [U] ❌ 6S0Z_A:2276 no longer at interface
H:114 [ARG] 0:2288 [G] K:84 [GLY] A:2282 [G] ❌ 6S0Z_A:2282 no longer at interface
H:19 [TYR] 0:2363 [G] K:9 [TYR] A:2356 [A] ❌ 6S0Z_A:2356 no longer at interface
H:18 [GLU] 0:963 [C] K:8 [LYS] A:913 [U] ❌ 6S0Z_A:913 no longer at interface
H:160 [SER] 0:1132 [A] K:128 [LYS] A:1072 [A] ❌ 1VQ8_0:1132 no longer at interface
H:163 [ILE] 0:1222 [A] K:130 [LYS] A:1162 [C] ❌ 1VQ8_H:163, 1VQ8_0:1222 no longer at interface
H:71 [ARG] 0:2505 [G] K:56 [ARG] A:2497 [G] ❌ 1VQ8_0:2505 no longer at interface
H:78 [GLY] 0:2505 [G] K:59 [LYS] A:2497 [G] ❌ 1VQ8_H:78, 1VQ8_0:2505 no longer at interface
H:111 [ASP] 0:2529 [G] K:81 [VAL] A:2521 [G] ❌ 1VQ8_0:2529 no longer at interface
H:112 [GLY] 0:2284 [G] K:82 [ARG] A:2278 [G] ❌ 1VQ8_0:2284 no longer at interface
H:112 [GLY] 0:2286 [G] K:82 [ARG] A:2280 [G] ❌ 1VQ8_0:2286 no longer at interface
H:113 [MET] 0:1060 [C] K:83 [MET] A:1006 [G] ❌ 1VQ8_0:1060 no longer at interface
H:161 [CYS] 0:1134 [G] K:129 [THR] A:1074 [G] ❌ 6S0Z_K:129 no longer at interface
H:126 [ARG] 0:1004 [C] K:96 [VAL] A:953 [C] ❌ 6S0Z_K:96 no longer at interface
H:17 [ARG] 0:964 [G] K:7 [VAL] A:914 [G] ❌ 6S0Z_K:7 no longer at interface
H:17 [ARG] 0:965 [A] K:7 [VAL] A:915 [U] ❌ 6S0Z_K:7 no longer at interface
H:17 [ARG] 0:966 [U] K:7 [VAL] A:916 [U] ❌ 6S0Z_K:7 no longer at interface
H:89 [LYS] 0:1002 [G] K:68 [ILE] A:951 [G] ❌ 6S0Z_K:68 no longer at interface
H:89 [LYS] 0:1003 [U] K:68 [ILE] A:952 [A] ❌ 6S0Z_K:68 no longer at interface
H:89 [LYS] 0:1004 [C] K:68 [ILE] A:953 [C] ❌ 6S0Z_K:68 no longer at interface
H:20 [ILE] 0:1007 [A] K:10 [ARG] A:956 [A] ❌ 6S0Z_K:10 no longer at interface
H:21 [THR] 0:2311 [A] K:11 [ARG] A:2304 [G] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1007 [A] K:11 [ARG] A:956 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1006 [A] K:11 [ARG] A:955 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2312 [G] K:11 [ARG] A:2305 [A] ❌ 1VQ8_H:21 no longer at interface
H:39 [ASP] 0:1001 [U] K:29 [PHE] A:950 [A] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:1002 [G] K:29 [PHE] A:951 [G] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:967 [U] K:29 [PHE] A:917 [U] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:968 [G] K:29 [PHE] A:918 [G] ❌ 1VQ8_H:39 no longer at interface
H:84 [LYS] 0:969 [G] K:63 [LYS] A:919 [G] ❌ 1VQ8_H:84 no longer at interface
H:84 [LYS] 0:968 [G] K:63 [LYS] A:918 [G] ❌ 1VQ8_H:84 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.92 2.67 0.18 0.73 0.93 0.61 0.86 0.67 0.65 0.17 0.43


Other pairs involving 1VQ8_H_0 or 6S0Z_K_A

Total number of entries: 24

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_H_0 6S0Z_K_A 0.64 0.92 2.77 0.18 Ribosomal protein L10e compare
1JJ2_H_0 1VQ8_H_0 0.97 1.0 0.39 0.66 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 7K00_l_a 0.62 0.9 2.5 0.14 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_1 0.65 0.77 1.62 0.24 Ribosomal protein L10e compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7N1P_LP_23 0.63 0.91 2.2 0.16 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_2 0.89 0.81 1.6 0.39 Ribosomal protein L10e compare
1VQ8_H_0 7RYG_L_A 0.62 0.91 3.04 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7PJS_M_A 0.64 0.91 2.21 0.16 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
1VQ8_H_0 1YHQ_H_0 1.00 1.0 0.26 1.0 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 6S0Z_K_A 0.67 0.92 2.67 0.18 Ribosomal protein L10e compare
1YHQ_H_0 6S0Z_K_A 0.67 0.92 2.76 0.18 Ribosomal protein L10e compare
4Y4O_1Q_1A 6S0Z_K_A 0.83 0.97 1.53 0.64 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 6S0Z_K_A 0.83 0.96 1.48 0.5 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6AZ3_N_1 6S0Z_K_A 0.58 0.7 2.55 0.02 Ribosomal protein L10e compare
6AZ3_N_2 6S0Z_K_A 0.77 0.78 2.44 0.13 Ribosomal protein L10e compare
6S0Z_K_A 7RYG_L_A 0.80 0.98 1.68 0.53 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7OF0_N_A 0.67 0.92 3.4 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7N1P_LP_23 0.83 0.96 1.36 0.51 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7O7Y_BI_B5 0.71 0.89 2.81 0.11 Ribosomal protein L10e compare
6S0Z_K_A 7PJS_M_A 0.83 0.96 1.72 0.52 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7K00_l_a 0.81 0.97 1.4 0.48 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare