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All interfaces > All interologs > Interface groups > group138 > 1VQ8_H_0 vs 7K00_l_a

Interface analysis


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Licorice
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Licorice
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Common contacts -

1VQ8_H
1VQ8_0
7K00_l
7K00_a
Conserved?
H:114 [ARG] 0:2283 [G] l:83 [GLY] a:2250 [G] ✔
H:114 [ARG] 0:2309 [C] l:83 [GLY] a:2275 [C] ✔
H:114 [ARG] 0:2310 [G] l:83 [GLY] a:2276 [G] ✔
H:19 [TYR] 0:1007 [A] l:9 [PHE] a:911 [A] ✔
H:19 [TYR] 0:1008 [C] l:9 [PHE] a:912 [C] ✔
H:19 [TYR] 0:2312 [G] l:9 [PHE] a:2278 [A] ✔
H:96 [ARG] 0:1055 [G] l:74 [THR] a:956 [G] ✔
H:96 [ARG] 0:1056 [U] l:74 [THR] a:957 [C] ✔
H:18 [GLU] 0:963 [C] l:8 [LYS] a:868 [U] ✔
H:18 [GLU] 0:964 [G] l:8 [LYS] a:869 [G] ✔
H:116 [ALA] 0:1055 [G] l:85 [GLY] a:956 [G] ✔
H:116 [ALA] 0:2309 [C] l:85 [GLY] a:2275 [C] ✔
H:116 [ALA] 0:2310 [G] l:85 [GLY] a:2276 [G] ✔
H:117 [PHE] 0:1054 [G] l:86 [LYS] a:955 [PSU] ✔
H:117 [PHE] 0:1055 [G] l:86 [LYS] a:956 [G] ✔
H:117 [PHE] 0:2310 [G] l:86 [LYS] a:2276 [G] ✔
H:117 [PHE] 0:2311 [A] l:86 [LYS] a:2277 [G] ✔
H:98 [ASN] 0:1055 [G] l:76 [LYS] a:956 [G] ✔
H:98 [ASN] 0:1056 [U] l:76 [LYS] a:957 [C] ✔
H:88 [ARG] 0:1002 [G] l:66 [ARG] a:906 [U] ✔
H:88 [ARG] 0:1003 [U] l:66 [ARG] a:907 [G] ✔
H:160 [SER] 0:1133 [A] l:127 [LYS] a:1029 [A] ✔
H:160 [SER] 0:1134 [G] l:127 [LYS] a:1030 [C] ✔
H:156 [LYS] 0:2502 [C] l:123 [LYS] a:2467 [C] ✔
H:156 [LYS] 0:2517 [A] l:123 [LYS] a:2482 [A] ✔
H:156 [LYS] 0:2518 [C] l:123 [LYS] a:2483 [C] ✔
H:156 [LYS] 0:2519 [C] l:123 [LYS] a:2484 [G] ✔
H:156 [LYS] 0:2520 [G] l:123 [LYS] a:2485 [G] ✔
H:61 [SER] 0:2519 [C] l:45 [GLN] a:2484 [G] ✔
H:61 [SER] 0:2520 [G] l:45 [GLN] a:2485 [G] ✔
H:92 [HIS] 0:965 [A] l:70 [ASP] a:870 [U] ✔
H:92 [HIS] 0:1003 [U] l:70 [ASP] a:907 [G] ✔
H:92 [HIS] 0:1004 [C] l:70 [ASP] a:908 [C] ✔
H:90 [PHE] 0:966 [U] l:68 [PHE] a:871 [U] ✔
H:90 [PHE] 0:967 [U] l:68 [PHE] a:872 [U] ✔
H:90 [PHE] 0:1003 [U] l:68 [PHE] a:907 [G] ✔
H:157 [ILE] 0:2519 [C] l:124 [LEU] a:2484 [G] ✔
H:157 [ILE] 0:2520 [G] l:124 [LEU] a:2485 [G] ✔
H:152 [ARG] 0:2502 [C] l:119 [LEU] a:2467 [C] ✔
H:152 [ARG] 0:2503 [A] l:119 [LEU] a:2468 [A] ✔
H:64 [ALA] 0:2518 [C] l:48 [ALA] a:2483 [C] ✔
H:64 [ALA] 0:2519 [C] l:48 [ALA] a:2484 [G] ✔
H:158 [THR] 0:2520 [G] l:125 [PRO] a:2485 [G] ✔
H:158 [THR] 0:2521 [A] l:125 [PRO] a:2486 [C] ✔
H:118 [GLY] 0:1054 [G] l:87 [GLY] a:955 [PSU] ✔
H:118 [GLY] 0:1055 [G] l:87 [GLY] a:956 [G] ✔
H:115 [ALA] 0:2283 [G] l:84 [LYS] a:2250 [G] ✔
H:115 [ALA] 0:2309 [C] l:84 [LYS] a:2275 [C] ✔
H:115 [ALA] 0:2310 [G] l:84 [LYS] a:2276 [G] ✔
H:71 [ARG] 0:2504 [A] l:55 [ARG] a:2469 [A] ✔
H:71 [ARG] 0:2517 [A] l:55 [ARG] a:2482 [A] ✔
H:155 [ASN] 0:2501 [G] l:122 [ALA] a:2466 [C] ✔
H:155 [ASN] 0:2502 [C] l:122 [ALA] a:2467 [C] ✔
H:155 [ASN] 0:2519 [C] l:122 [ALA] a:2484 [G] ✔
H:155 [ASN] 0:2520 [G] l:122 [ALA] a:2485 [G] ✔
H:111 [ASP] 0:2530 [C] l:79 [ALA] a:2495 [G] ✔
H:60 [GLY] 0:2519 [C] l:44 [ARG] a:2484 [G] ✔
H:17 [ARG] 0:964 [G] l:7 [THR] a:869 [G] ✔
H:17 [ARG] 0:965 [A] l:7 [THR] a:870 [U] ✔
H:151 [ARG] 0:2503 [A] l:118 [LYS] a:2468 [A] ✔
H:58 [ARG] 0:2520 [G] l:42 [THR] a:2485 [G] ✔
H:131 [GLU] 0:1004 [C] l:100 [LYS] a:908 [C] ✔
H:113 [MET] 0:2283 [G] l:81 [4D4] a:2250 [G] ✔
H:113 [MET] 0:2530 [C] l:81 [4D4] a:2495 [G] ✔
H:113 [MET] 0:2531 [U] l:81 [4D4] a:2496 [C] ✔
H:97 [GLU] 0:1056 [U] l:75 [GLU] a:957 [C] ✔
H:97 [GLU] 0:2494 [G] l:75 [GLU] a:2459 [A] ✔
H:112 [GLY] 0:2530 [C] l:80 [VAL] a:2495 [G] ✔
H:114 [ARG] 0:2282 [U] l:83 [GLY] a:2249 [U] ❌ 7K00_l_a
H:114 [ARG] 0:2288 [G] l:83 [GLY] a:2255 [G] ❌ 7K00_l_a
H:114 [ARG] 0:2531 [U] l:83 [GLY] a:2496 [C] ❌ 7K00_l_a
H:19 [TYR] 0:2311 [A] l:9 [PHE] a:2277 [G] ❌ 7K00_l_a
H:96 [ARG] 0:1006 [A] l:74 [THR] a:910 [A] ❌ 7K00_l_a
H:96 [ARG] 0:1054 [G] l:74 [THR] a:955 [PSU] ❌ 7K00_l_a
H:116 [ALA] 0:1054 [G] l:85 [GLY] a:955 [PSU] ❌ 7K00_l_a
H:117 [PHE] 0:1006 [A] l:86 [LYS] a:910 [A] ❌ 7K00_l_a
H:16 [ARG] 0:1005 [A] l:6 [ARG] a:909 [A] ❌ 7K00_l_a
H:16 [ARG] 0:1007 [A] l:6 [ARG] a:911 [A] ❌ 7K00_l_a
H:16 [ARG] 0:1008 [C] l:6 [ARG] a:912 [C] ❌ 7K00_l_a
H:87 [LEU] 0:1002 [G] l:65 [ILE] a:906 [U] ❌ 7K00_l_a
H:156 [LYS] 0:2501 [G] l:123 [LYS] a:2466 [C] ❌ 7K00_l_a
H:92 [HIS] 0:966 [U] l:70 [ASP] a:871 [U] ❌ 7K00_l_a
H:90 [PHE] 0:1002 [G] l:68 [PHE] a:906 [U] ❌ 7K00_l_a
H:157 [ILE] 0:1133 [A] l:124 [LEU] a:1029 [A] ❌ 7K00_l_a
H:152 [ARG] 0:2504 [A] l:119 [LEU] a:2469 [A] ❌ 7K00_l_a
H:158 [THR] 0:1133 [A] l:125 [PRO] a:1029 [A] ❌ 7K00_l_a
H:155 [ASN] 0:1134 [G] l:122 [ALA] a:1030 [C] ❌ 7K00_l_a
H:17 [ARG] 0:966 [U] l:7 [THR] a:871 [U] ❌ 7K00_l_a
H:151 [ARG] 0:2502 [C] l:118 [LYS] a:2467 [C] ❌ 7K00_l_a
H:86 [THR] 0:1002 [G] l:64 [TRP] a:906 [U] ❌ 7K00_l_a
H:20 [ILE] 0:1007 [A] l:10 [ARG] a:911 [A] ❌ 7K00_l_a
H:113 [MET] 0:1054 [G] l:81 [4D4] a:955 [PSU] ❌ 7K00_l_a
H:113 [MET] 0:1055 [G] l:81 [4D4] a:956 [G] ❌ 7K00_l_a
H:113 [MET] 0:2310 [G] l:81 [4D4] a:2276 [G] ❌ 7K00_l_a
H:112 [GLY] 0:2531 [U] l:80 [VAL] a:2496 [C] ❌ 7K00_l_a
H:20 [ILE] 0:2312 [G] l:10 [ARG] a:2278 [A] ❌ 1VQ8_H_0
H:131 [GLU] 0:1003 [U] l:100 [LYS] a:907 [G] ❌ 1VQ8_H_0
H:60 [GLY] 0:2518 [C] l:44 [ARG] a:2483 [C] ❌ 1VQ8_H_0
H:16 [ARG] 0:966 [U] l:6 [ARG] a:871 [U] ❌ 1VQ8_H_0
H:16 [ARG] 0:965 [A] l:6 [ARG] a:870 [U] ❌ 1VQ8_H_0
H:86 [THR] 0:968 [G] l:64 [TRP] a:873 [C] ❌ 1VQ8_H_0
H:86 [THR] 0:967 [U] l:64 [TRP] a:872 [U] ❌ 1VQ8_H_0
H:87 [LEU] 0:967 [U] l:65 [ILE] a:872 [U] ❌ 1VQ8_H_0
H:90 [PHE] 0:965 [A] l:68 [PHE] a:870 [U] ❌ 1VQ8_H_0
H:18 [GLU] 0:1005 [A] l:8 [LYS] a:909 [A] ❌ 1VQ8_H_0
H:18 [GLU] 0:1008 [C] l:8 [LYS] a:912 [C] ❌ 1VQ8_H_0
H:114 [ARG] 0:1054 [G] l:83 [GLY] a:955 [PSU] ❌ 1VQ8_H_0
H:115 [ALA] 0:2282 [U] l:84 [LYS] a:2249 [U] ❌ 1VQ8_H_0
H:115 [ALA] 0:2288 [G] l:84 [LYS] a:2255 [G] ❌ 1VQ8_H_0
H:116 [ALA] 0:2311 [A] l:85 [GLY] a:2277 [G] ❌ 1VQ8_H_0
H:114 [ARG] 0:2285 [G] l:83 [GLY] a:2252 [G] ❌ 7K00_a:2252 no longer at interface
H:114 [ARG] 0:2287 [C] l:83 [GLY] a:2254 [C] ❌ 7K00_a:2254 no longer at interface
H:19 [TYR] 0:2363 [G] l:9 [PHE] a:2329 [U] ❌ 7K00_a:2329 no longer at interface
H:155 [ASN] 0:1135 [G] l:122 [ALA] a:1031 [G] ❌ 7K00_a:1031 no longer at interface
H:154 [TYR] 0:1135 [G] l:121 [ALA] a:1031 [G] ❌ 7K00_l:121, 7K00_a:1031 no longer at interface
H:151 [ARG] 0:1135 [G] l:118 [LYS] a:1031 [G] ❌ 7K00_a:1031 no longer at interface
H:113 [MET] 0:1057 [A] l:81 [4D4] a:959 [A] ❌ 7K00_a:959 no longer at interface
H:113 [MET] 0:1058 [A] l:81 [4D4] a:960 [A] ❌ 7K00_a:960 no longer at interface
H:111 [ASP] 0:2529 [G] l:79 [ALA] a:2494 [G] ❌ 1VQ8_0:2529 no longer at interface
H:112 [GLY] 0:2529 [G] l:80 [VAL] a:2494 [G] ❌ 1VQ8_0:2529 no longer at interface
H:113 [MET] 0:2284 [G] l:81 [4D4] a:2251 [OMG] ❌ 1VQ8_0:2284 no longer at interface
H:161 [CYS] 0:1134 [G] l:128 [THR] a:1030 [C] ❌ 7K00_l:128 no longer at interface
H:126 [ARG] 0:1004 [C] l:95 [LEU] a:908 [C] ❌ 7K00_l:95 no longer at interface
H:159 [PRO] 0:1133 [A] l:126 [ILE] a:1029 [A] ❌ 7K00_l:126 no longer at interface
H:159 [PRO] 0:1134 [G] l:126 [ILE] a:1030 [C] ❌ 7K00_l:126 no longer at interface
H:154 [TYR] 0:1133 [A] l:121 [ALA] a:1029 [A] ❌ 7K00_l:121 no longer at interface
H:154 [TYR] 0:1134 [G] l:121 [ALA] a:1030 [C] ❌ 7K00_l:121 no longer at interface
H:89 [LYS] 0:1002 [G] l:67 [VAL] a:906 [U] ❌ 7K00_l:67 no longer at interface
H:89 [LYS] 0:1003 [U] l:67 [VAL] a:907 [G] ❌ 7K00_l:67 no longer at interface
H:89 [LYS] 0:1004 [C] l:67 [VAL] a:908 [C] ❌ 7K00_l:67 no longer at interface
H:21 [THR] 0:2312 [G] l:11 [LYS] a:2278 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1007 [A] l:11 [LYS] a:911 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1006 [A] l:11 [LYS] a:910 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2311 [A] l:11 [LYS] a:2277 [G] ❌ 1VQ8_H:21 no longer at interface
H:39 [ASP] 0:1001 [U] l:28 [PHE] a:905 [A] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:968 [G] l:28 [PHE] a:873 [C] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:1002 [G] l:28 [PHE] a:906 [U] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:967 [U] l:28 [PHE] a:872 [U] ❌ 1VQ8_H:39 no longer at interface
H:67 [LEU] 0:2518 [C] l:51 [ARG] a:2483 [C] ❌ 1VQ8_H:67 no longer at interface
H:84 [LYS] 0:968 [G] l:62 [LYS] a:873 [C] ❌ 1VQ8_H:84 no longer at interface
H:84 [LYS] 0:969 [G] l:62 [LYS] a:874 [G] ❌ 1VQ8_H:84 no longer at interface
H:128 [GLN] 0:1004 [C] l:97 [GLN] a:908 [C] ❌ 1VQ8_H:128 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.9 2.5 0.14 0.73 0.9 0.61 0.84 0.62 0.63 0.15 0.43


Other pairs involving 1VQ8_H_0 or 7K00_l_a

Total number of entries: 19

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_N_2 7K00_l_a 0.72 0.79 2.53 0.13 Ribosomal protein L10e compare
4Y4O_1Q_1A 7K00_l_a 0.85 0.97 0.85 0.55 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7K00_l_a 0.81 0.97 1.4 0.48 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7K00_l_a 0.97 1.0 0.27 0.96 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 7K00_l_a 0.62 0.9 2.5 0.14 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_1 0.65 0.77 1.62 0.24 Ribosomal protein L10e compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7N1P_LP_23 0.63 0.91 2.2 0.16 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_2 0.89 0.81 1.6 0.39 Ribosomal protein L10e compare
1VQ8_H_0 7RYG_L_A 0.62 0.91 3.04 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7PJS_M_A 0.64 0.91 2.21 0.16 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
1VQ8_H_0 1YHQ_H_0 1.00 1.0 0.26 1.0 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 6S0Z_K_A 0.67 0.92 2.67 0.18 Ribosomal protein L10e compare
6AZ3_N_1 7K00_l_a 0.57 0.69 3.47 0.07 Ribosomal protein L10e compare
1YHQ_H_0 7K00_l_a 0.63 0.9 2.63 0.14 Ribosomal protein L10e compare
1JJ2_H_0 7K00_l_a 0.61 0.9 2.65 0.16 Ribosomal protein L10e compare
1JJ2_H_0 1VQ8_H_0 0.97 1.0 0.39 0.66 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare