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All interfaces > All interologs > Interface groups > group138 > 1VQ8_H_0 vs 7N1P_LP_23

Interface analysis


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Common contacts -

1VQ8_H
1VQ8_0
7N1P_LP
7N1P_23
Conserved?
H:114 [ARG] 0:2283 [G] LP:83 [GLY] 23:2250 [G] ✔
H:114 [ARG] 0:2309 [C] LP:83 [GLY] 23:2275 [C] ✔
H:114 [ARG] 0:2310 [G] LP:83 [GLY] 23:2276 [G] ✔
H:19 [TYR] 0:1007 [A] LP:9 [PHE] 23:911 [A] ✔
H:19 [TYR] 0:1008 [C] LP:9 [PHE] 23:912 [C] ✔
H:19 [TYR] 0:2312 [G] LP:9 [PHE] 23:2278 [A] ✔
H:96 [ARG] 0:1055 [G] LP:74 [THR] 23:956 [G] ✔
H:96 [ARG] 0:1056 [U] LP:74 [THR] 23:957 [C] ✔
H:18 [GLU] 0:963 [C] LP:8 [LYS] 23:868 [U] ✔
H:18 [GLU] 0:964 [G] LP:8 [LYS] 23:869 [G] ✔
H:116 [ALA] 0:1055 [G] LP:85 [GLY] 23:956 [G] ✔
H:116 [ALA] 0:2309 [C] LP:85 [GLY] 23:2275 [C] ✔
H:116 [ALA] 0:2310 [G] LP:85 [GLY] 23:2276 [G] ✔
H:117 [PHE] 0:1054 [G] LP:86 [LYS] 23:955 [PSU] ✔
H:117 [PHE] 0:1055 [G] LP:86 [LYS] 23:956 [G] ✔
H:117 [PHE] 0:2310 [G] LP:86 [LYS] 23:2276 [G] ✔
H:117 [PHE] 0:2311 [A] LP:86 [LYS] 23:2277 [G] ✔
H:98 [ASN] 0:1055 [G] LP:76 [LYS] 23:956 [G] ✔
H:98 [ASN] 0:1056 [U] LP:76 [LYS] 23:957 [C] ✔
H:88 [ARG] 0:1002 [G] LP:66 [ARG] 23:906 [U] ✔
H:88 [ARG] 0:1003 [U] LP:66 [ARG] 23:907 [G] ✔
H:160 [SER] 0:1133 [A] LP:127 [LYS] 23:1029 [A] ✔
H:160 [SER] 0:1134 [G] LP:127 [LYS] 23:1030 [C] ✔
H:156 [LYS] 0:2502 [C] LP:123 [LYS] 23:2467 [C] ✔
H:156 [LYS] 0:2517 [A] LP:123 [LYS] 23:2482 [A] ✔
H:156 [LYS] 0:2518 [C] LP:123 [LYS] 23:2483 [C] ✔
H:156 [LYS] 0:2519 [C] LP:123 [LYS] 23:2484 [G] ✔
H:156 [LYS] 0:2520 [G] LP:123 [LYS] 23:2485 [G] ✔
H:61 [SER] 0:2519 [C] LP:45 [GLN] 23:2484 [G] ✔
H:61 [SER] 0:2520 [G] LP:45 [GLN] 23:2485 [G] ✔
H:92 [HIS] 0:965 [A] LP:70 [ASP] 23:870 [U] ✔
H:92 [HIS] 0:1003 [U] LP:70 [ASP] 23:907 [G] ✔
H:92 [HIS] 0:1004 [C] LP:70 [ASP] 23:908 [C] ✔
H:90 [PHE] 0:966 [U] LP:68 [PHE] 23:871 [U] ✔
H:90 [PHE] 0:967 [U] LP:68 [PHE] 23:872 [U] ✔
H:90 [PHE] 0:1003 [U] LP:68 [PHE] 23:907 [G] ✔
H:157 [ILE] 0:2519 [C] LP:124 [LEU] 23:2484 [G] ✔
H:157 [ILE] 0:2520 [G] LP:124 [LEU] 23:2485 [G] ✔
H:152 [ARG] 0:2502 [C] LP:119 [LEU] 23:2467 [C] ✔
H:152 [ARG] 0:2503 [A] LP:119 [LEU] 23:2468 [A] ✔
H:152 [ARG] 0:2504 [A] LP:119 [LEU] 23:2469 [A] ✔
H:64 [ALA] 0:2518 [C] LP:48 [ALA] 23:2483 [C] ✔
H:64 [ALA] 0:2519 [C] LP:48 [ALA] 23:2484 [G] ✔
H:158 [THR] 0:2520 [G] LP:125 [PRO] 23:2485 [G] ✔
H:158 [THR] 0:2521 [A] LP:125 [PRO] 23:2486 [C] ✔
H:118 [GLY] 0:1054 [G] LP:87 [GLY] 23:955 [PSU] ✔
H:118 [GLY] 0:1055 [G] LP:87 [GLY] 23:956 [G] ✔
H:115 [ALA] 0:2283 [G] LP:84 [LYS] 23:2250 [G] ✔
H:115 [ALA] 0:2309 [C] LP:84 [LYS] 23:2275 [C] ✔
H:115 [ALA] 0:2310 [G] LP:84 [LYS] 23:2276 [G] ✔
H:71 [ARG] 0:2504 [A] LP:55 [ARG] 23:2469 [A] ✔
H:155 [ASN] 0:2501 [G] LP:122 [ALA] 23:2466 [C] ✔
H:155 [ASN] 0:2502 [C] LP:122 [ALA] 23:2467 [C] ✔
H:155 [ASN] 0:2519 [C] LP:122 [ALA] 23:2484 [G] ✔
H:155 [ASN] 0:2520 [G] LP:122 [ALA] 23:2485 [G] ✔
H:111 [ASP] 0:2530 [C] LP:80 [VAL] 23:2495 [G] ✔
H:60 [GLY] 0:2519 [C] LP:44 [ARG] 23:2484 [G] ✔
H:17 [ARG] 0:964 [G] LP:7 [THR] 23:869 [G] ✔
H:17 [ARG] 0:965 [A] LP:7 [THR] 23:870 [U] ✔
H:58 [ARG] 0:2520 [G] LP:42 [THR] 23:2485 [G] ✔
H:131 [GLU] 0:1004 [C] LP:100 [LYS] 23:908 [C] ✔
H:113 [MET] 0:1055 [G] LP:82 [MET] 23:956 [G] ✔
H:113 [MET] 0:1057 [A] LP:82 [MET] 23:959 [A] ✔
H:113 [MET] 0:1058 [A] LP:82 [MET] 23:960 [A] ✔
H:113 [MET] 0:2283 [G] LP:82 [MET] 23:2250 [G] ✔
H:113 [MET] 0:2530 [C] LP:82 [MET] 23:2495 [G] ✔
H:113 [MET] 0:2531 [U] LP:82 [MET] 23:2496 [C] ✔
H:97 [GLU] 0:1056 [U] LP:75 [GLU] 23:957 [C] ✔
H:112 [GLY] 0:2530 [C] LP:81 [4D4] 23:2495 [G] ✔
H:112 [GLY] 0:2531 [U] LP:81 [4D4] 23:2496 [C] ✔
H:114 [ARG] 0:2282 [U] LP:83 [GLY] 23:2249 [U] ❌ 7N1P_LP_23
H:114 [ARG] 0:2288 [G] LP:83 [GLY] 23:2255 [G] ❌ 7N1P_LP_23
H:114 [ARG] 0:2531 [U] LP:83 [GLY] 23:2496 [C] ❌ 7N1P_LP_23
H:19 [TYR] 0:2311 [A] LP:9 [PHE] 23:2277 [G] ❌ 7N1P_LP_23
H:96 [ARG] 0:1006 [A] LP:74 [THR] 23:910 [A] ❌ 7N1P_LP_23
H:96 [ARG] 0:1054 [G] LP:74 [THR] 23:955 [PSU] ❌ 7N1P_LP_23
H:116 [ALA] 0:1054 [G] LP:85 [GLY] 23:955 [PSU] ❌ 7N1P_LP_23
H:117 [PHE] 0:1006 [A] LP:86 [LYS] 23:910 [A] ❌ 7N1P_LP_23
H:16 [ARG] 0:1005 [A] LP:6 [ARG] 23:909 [A] ❌ 7N1P_LP_23
H:16 [ARG] 0:1007 [A] LP:6 [ARG] 23:911 [A] ❌ 7N1P_LP_23
H:16 [ARG] 0:1008 [C] LP:6 [ARG] 23:912 [C] ❌ 7N1P_LP_23
H:87 [LEU] 0:1002 [G] LP:65 [ILE] 23:906 [U] ❌ 7N1P_LP_23
H:156 [LYS] 0:2501 [G] LP:123 [LYS] 23:2466 [C] ❌ 7N1P_LP_23
H:92 [HIS] 0:966 [U] LP:70 [ASP] 23:871 [U] ❌ 7N1P_LP_23
H:90 [PHE] 0:1002 [G] LP:68 [PHE] 23:906 [U] ❌ 7N1P_LP_23
H:157 [ILE] 0:1133 [A] LP:124 [LEU] 23:1029 [A] ❌ 7N1P_LP_23
H:158 [THR] 0:1133 [A] LP:125 [PRO] 23:1029 [A] ❌ 7N1P_LP_23
H:71 [ARG] 0:2517 [A] LP:55 [ARG] 23:2482 [A] ❌ 7N1P_LP_23
H:155 [ASN] 0:1134 [G] LP:122 [ALA] 23:1030 [C] ❌ 7N1P_LP_23
H:17 [ARG] 0:966 [U] LP:7 [THR] 23:871 [U] ❌ 7N1P_LP_23
H:86 [THR] 0:1002 [G] LP:64 [TRP] 23:906 [U] ❌ 7N1P_LP_23
H:20 [ILE] 0:1007 [A] LP:10 [ARG] 23:911 [A] ❌ 7N1P_LP_23
H:113 [MET] 0:1054 [G] LP:82 [MET] 23:955 [PSU] ❌ 7N1P_LP_23
H:113 [MET] 0:2310 [G] LP:82 [MET] 23:2276 [G] ❌ 7N1P_LP_23
H:97 [GLU] 0:2494 [G] LP:75 [GLU] 23:2459 [A] ❌ 7N1P_LP_23
H:20 [ILE] 0:2312 [G] LP:10 [ARG] 23:2278 [A] ❌ 1VQ8_H_0
H:131 [GLU] 0:1003 [U] LP:100 [LYS] 23:907 [G] ❌ 1VQ8_H_0
H:156 [LYS] 0:2503 [A] LP:123 [LYS] 23:2468 [A] ❌ 1VQ8_H_0
H:60 [GLY] 0:2518 [C] LP:44 [ARG] 23:2483 [C] ❌ 1VQ8_H_0
H:16 [ARG] 0:964 [G] LP:6 [ARG] 23:869 [G] ❌ 1VQ8_H_0
H:16 [ARG] 0:966 [U] LP:6 [ARG] 23:871 [U] ❌ 1VQ8_H_0
H:16 [ARG] 0:965 [A] LP:6 [ARG] 23:870 [U] ❌ 1VQ8_H_0
H:86 [THR] 0:968 [G] LP:64 [TRP] 23:873 [C] ❌ 1VQ8_H_0
H:86 [THR] 0:967 [U] LP:64 [TRP] 23:872 [U] ❌ 1VQ8_H_0
H:87 [LEU] 0:967 [U] LP:65 [ILE] 23:872 [U] ❌ 1VQ8_H_0
H:90 [PHE] 0:965 [A] LP:68 [PHE] 23:870 [U] ❌ 1VQ8_H_0
H:18 [GLU] 0:1005 [A] LP:8 [LYS] 23:909 [A] ❌ 1VQ8_H_0
H:18 [GLU] 0:1007 [A] LP:8 [LYS] 23:911 [A] ❌ 1VQ8_H_0
H:18 [GLU] 0:1008 [C] LP:8 [LYS] 23:912 [C] ❌ 1VQ8_H_0
H:112 [GLY] 0:2283 [G] LP:81 [4D4] 23:2250 [G] ❌ 1VQ8_H_0
H:114 [ARG] 0:1054 [G] LP:83 [GLY] 23:955 [PSU] ❌ 1VQ8_H_0
H:115 [ALA] 0:2282 [U] LP:84 [LYS] 23:2249 [U] ❌ 1VQ8_H_0
H:115 [ALA] 0:2288 [G] LP:84 [LYS] 23:2255 [G] ❌ 1VQ8_H_0
H:116 [ALA] 0:2311 [A] LP:85 [GLY] 23:2277 [G] ❌ 1VQ8_H_0
H:114 [ARG] 0:2285 [G] LP:83 [GLY] 23:2252 [G] ❌ 7N1P_23:2252 no longer at interface
H:114 [ARG] 0:2287 [C] LP:83 [GLY] 23:2254 [C] ❌ 7N1P_23:2254 no longer at interface
H:19 [TYR] 0:2363 [G] LP:9 [PHE] 23:2329 [U] ❌ 7N1P_23:2329 no longer at interface
H:155 [ASN] 0:1135 [G] LP:122 [ALA] 23:1031 [G] ❌ 7N1P_23:1031 no longer at interface
H:154 [TYR] 0:1135 [G] LP:121 [ALA] 23:1031 [G] ❌ 7N1P_LP:121, 7N1P_23:1031 no longer at interface
H:151 [ARG] 0:1135 [G] LP:118 [LYS] 23:1031 [G] ❌ 7N1P_LP:118, 7N1P_23:1031 no longer at interface
H:71 [ARG] 0:2505 [G] LP:55 [ARG] 23:2470 [G] ❌ 1VQ8_0:2505 no longer at interface
H:111 [ASP] 0:2529 [G] LP:80 [VAL] 23:2494 [G] ❌ 1VQ8_0:2529 no longer at interface
H:112 [GLY] 0:2284 [G] LP:81 [4D4] 23:2251 [OMG] ❌ 1VQ8_0:2284 no longer at interface
H:113 [MET] 0:1060 [C] LP:82 [MET] 23:962 [G] ❌ 1VQ8_0:1060 no longer at interface
H:161 [CYS] 0:1134 [G] LP:128 [THR] 23:1030 [C] ❌ 7N1P_LP:128 no longer at interface
H:126 [ARG] 0:1004 [C] LP:95 [LEU] 23:908 [C] ❌ 7N1P_LP:95 no longer at interface
H:159 [PRO] 0:1133 [A] LP:126 [ILE] 23:1029 [A] ❌ 7N1P_LP:126 no longer at interface
H:159 [PRO] 0:1134 [G] LP:126 [ILE] 23:1030 [C] ❌ 7N1P_LP:126 no longer at interface
H:154 [TYR] 0:1133 [A] LP:121 [ALA] 23:1029 [A] ❌ 7N1P_LP:121 no longer at interface
H:154 [TYR] 0:1134 [G] LP:121 [ALA] 23:1030 [C] ❌ 7N1P_LP:121 no longer at interface
H:151 [ARG] 0:2502 [C] LP:118 [LYS] 23:2467 [C] ❌ 7N1P_LP:118 no longer at interface
H:151 [ARG] 0:2503 [A] LP:118 [LYS] 23:2468 [A] ❌ 7N1P_LP:118 no longer at interface
H:89 [LYS] 0:1002 [G] LP:67 [VAL] 23:906 [U] ❌ 7N1P_LP:67 no longer at interface
H:89 [LYS] 0:1003 [U] LP:67 [VAL] 23:907 [G] ❌ 7N1P_LP:67 no longer at interface
H:89 [LYS] 0:1004 [C] LP:67 [VAL] 23:908 [C] ❌ 7N1P_LP:67 no longer at interface
H:21 [THR] 0:1007 [A] LP:11 [LYS] 23:911 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2311 [A] LP:11 [LYS] 23:2277 [G] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2312 [G] LP:11 [LYS] 23:2278 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1006 [A] LP:11 [LYS] 23:910 [A] ❌ 1VQ8_H:21 no longer at interface
H:39 [ASP] 0:968 [G] LP:28 [PHE] 23:873 [C] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:967 [U] LP:28 [PHE] 23:872 [U] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:1002 [G] LP:28 [PHE] 23:906 [U] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:1001 [U] LP:28 [PHE] 23:905 [A] ❌ 1VQ8_H:39 no longer at interface
H:67 [LEU] 0:2518 [C] LP:51 [ARG] 23:2483 [C] ❌ 1VQ8_H:67 no longer at interface
H:84 [LYS] 0:969 [G] LP:62 [LYS] 23:874 [G] ❌ 1VQ8_H:84 no longer at interface
H:84 [LYS] 0:968 [G] LP:62 [LYS] 23:873 [C] ❌ 1VQ8_H:84 no longer at interface
H:128 [GLN] 0:1004 [C] LP:97 [GLN] 23:908 [C] ❌ 1VQ8_H:128 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.91 2.2 0.16 0.73 0.92 0.6 0.88 0.63 0.62 0.16 0.43


Other pairs involving 1VQ8_H_0 or 7N1P_LP_23

Total number of entries: 19

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_N_2 7N1P_LP_23 0.76 0.8 2.11 0.16 Ribosomal protein L10e compare
4Y4O_1Q_1A 7N1P_LP_23 0.84 0.97 0.77 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7N1P_LP_23 0.83 0.96 1.36 0.51 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7N1P_LP_23 0.98 0.99 0.58 1.0 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 7K00_l_a 0.62 0.9 2.5 0.14 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_1 0.65 0.77 1.62 0.24 Ribosomal protein L10e compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7N1P_LP_23 0.63 0.91 2.2 0.16 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_2 0.89 0.81 1.6 0.39 Ribosomal protein L10e compare
1VQ8_H_0 7RYG_L_A 0.62 0.91 3.04 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7PJS_M_A 0.64 0.91 2.21 0.16 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
1VQ8_H_0 1YHQ_H_0 1.00 1.0 0.26 1.0 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 6S0Z_K_A 0.67 0.92 2.67 0.18 Ribosomal protein L10e compare
6AZ3_N_1 7N1P_LP_23 0.57 0.69 2.45 0.07 Ribosomal protein L10e compare
1YHQ_H_0 7N1P_LP_23 0.64 0.91 2.3 0.16 Ribosomal protein L10e compare
1JJ2_H_0 7N1P_LP_23 0.63 0.91 2.32 0.18 Ribosomal protein L10e compare
1JJ2_H_0 1VQ8_H_0 0.97 1.0 0.39 0.66 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare