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All interfaces > All interologs > Interface groups > group138 > 1VQ8_H_0 vs 7RYG_L_A

Interface analysis


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Common contacts -

1VQ8_H
1VQ8_0
7RYG_L
7RYG_A
Conserved?
H:114 [ARG] 0:2283 [G] L:84 [GLY] A:2246 [G] ✔
H:114 [ARG] 0:2309 [C] L:84 [GLY] A:2271 [C] ✔
H:114 [ARG] 0:2310 [G] L:84 [GLY] A:2272 [G] ✔
H:19 [TYR] 0:1007 [A] L:9 [PHE] A:909 [A] ✔
H:19 [TYR] 0:1008 [C] L:9 [PHE] A:910 [C] ✔
H:19 [TYR] 0:2312 [G] L:9 [PHE] A:2274 [A] ✔
H:96 [ARG] 0:1055 [G] L:75 [THR] A:953 [G] ✔
H:96 [ARG] 0:1056 [U] L:75 [THR] A:954 [C] ✔
H:18 [GLU] 0:963 [C] L:8 [LYS] A:866 [U] ✔
H:18 [GLU] 0:964 [G] L:8 [LYS] A:867 [G] ✔
H:116 [ALA] 0:1055 [G] L:86 [GLY] A:953 [G] ✔
H:116 [ALA] 0:2309 [C] L:86 [GLY] A:2271 [C] ✔
H:116 [ALA] 0:2310 [G] L:86 [GLY] A:2272 [G] ✔
H:117 [PHE] 0:1054 [G] L:87 [LYS] A:952 [PSU] ✔
H:117 [PHE] 0:1055 [G] L:87 [LYS] A:953 [G] ✔
H:117 [PHE] 0:2310 [G] L:87 [LYS] A:2272 [G] ✔
H:117 [PHE] 0:2311 [A] L:87 [LYS] A:2273 [G] ✔
H:98 [ASN] 0:1055 [G] L:77 [LYS] A:953 [G] ✔
H:98 [ASN] 0:1056 [U] L:77 [LYS] A:954 [C] ✔
H:88 [ARG] 0:1002 [G] L:67 [ARG] A:904 [U] ✔
H:88 [ARG] 0:1003 [U] L:67 [ARG] A:905 [G] ✔
H:161 [CYS] 0:1134 [G] L:128 [LYS] A:1027 [C] ✔
H:156 [LYS] 0:2502 [C] L:124 [LYS] A:2463 [C] ✔
H:156 [LYS] 0:2517 [A] L:124 [LYS] A:2478 [A] ✔
H:156 [LYS] 0:2518 [C] L:124 [LYS] A:2479 [C] ✔
H:156 [LYS] 0:2519 [C] L:124 [LYS] A:2480 [G] ✔
H:156 [LYS] 0:2520 [G] L:124 [LYS] A:2481 [G] ✔
H:61 [SER] 0:2519 [C] L:46 [GLN] A:2480 [G] ✔
H:61 [SER] 0:2520 [G] L:46 [GLN] A:2481 [G] ✔
H:92 [HIS] 0:965 [A] L:71 [ASP] A:868 [U] ✔
H:92 [HIS] 0:1004 [C] L:71 [ASP] A:906 [C] ✔
H:90 [PHE] 0:966 [U] L:69 [PHE] A:869 [U] ✔
H:90 [PHE] 0:967 [U] L:69 [PHE] A:870 [U] ✔
H:157 [ILE] 0:2519 [C] L:125 [LEU] A:2480 [G] ✔
H:157 [ILE] 0:2520 [G] L:125 [LEU] A:2481 [G] ✔
H:64 [ALA] 0:2518 [C] L:49 [ALA] A:2479 [C] ✔
H:64 [ALA] 0:2519 [C] L:49 [ALA] A:2480 [G] ✔
H:158 [THR] 0:2520 [G] L:126 [PRO] A:2481 [G] ✔
H:158 [THR] 0:2521 [A] L:126 [PRO] A:2482 [C] ✔
H:118 [GLY] 0:1055 [G] L:88 [GLY] A:953 [G] ✔
H:115 [ALA] 0:2283 [G] L:85 [ASN] A:2246 [G] ✔
H:115 [ALA] 0:2309 [C] L:85 [ASN] A:2271 [C] ✔
H:115 [ALA] 0:2310 [G] L:85 [ASN] A:2272 [G] ✔
H:71 [ARG] 0:2504 [A] L:56 [ARG] A:2465 [A] ✔
H:155 [ASN] 0:2501 [G] L:123 [ALA] A:2462 [C] ✔
H:155 [ASN] 0:2502 [C] L:123 [ALA] A:2463 [C] ✔
H:155 [ASN] 0:2519 [C] L:123 [ALA] A:2480 [G] ✔
H:155 [ASN] 0:2520 [G] L:123 [ALA] A:2481 [G] ✔
H:111 [ASP] 0:2530 [C] L:81 [VAL] A:2491 [G] ✔
H:60 [GLY] 0:2519 [C] L:45 [ARG] A:2480 [G] ✔
H:17 [ARG] 0:964 [G] L:7 [THR] A:867 [G] ✔
H:58 [ARG] 0:2520 [G] L:43 [THR] A:2481 [G] ✔
H:113 [MET] 0:1055 [G] L:83 [MET] A:953 [G] ✔
H:113 [MET] 0:1057 [A] L:83 [MET] A:956 [A] ✔
H:113 [MET] 0:1058 [A] L:83 [MET] A:957 [A] ✔
H:113 [MET] 0:2283 [G] L:83 [MET] A:2246 [G] ✔
H:113 [MET] 0:2530 [C] L:83 [MET] A:2491 [G] ✔
H:113 [MET] 0:2531 [U] L:83 [MET] A:2492 [C] ✔
H:97 [GLU] 0:1056 [U] L:76 [GLU] A:954 [C] ✔
H:112 [GLY] 0:2530 [C] L:82 [ARG] A:2491 [G] ✔
H:112 [GLY] 0:2531 [U] L:82 [ARG] A:2492 [C] ✔
H:114 [ARG] 0:2288 [G] L:84 [GLY] A:2251 [G] ❌ 7RYG_L_A
H:114 [ARG] 0:2531 [U] L:84 [GLY] A:2492 [C] ❌ 7RYG_L_A
H:19 [TYR] 0:2311 [A] L:9 [PHE] A:2273 [G] ❌ 7RYG_L_A
H:96 [ARG] 0:1006 [A] L:75 [THR] A:908 [A] ❌ 7RYG_L_A
H:96 [ARG] 0:1054 [G] L:75 [THR] A:952 [PSU] ❌ 7RYG_L_A
H:116 [ALA] 0:1054 [G] L:86 [GLY] A:952 [PSU] ❌ 7RYG_L_A
H:117 [PHE] 0:1006 [A] L:87 [LYS] A:908 [A] ❌ 7RYG_L_A
H:16 [ARG] 0:1005 [A] L:6 [ARG] A:907 [A] ❌ 7RYG_L_A
H:16 [ARG] 0:1007 [A] L:6 [ARG] A:909 [A] ❌ 7RYG_L_A
H:16 [ARG] 0:1008 [C] L:6 [ARG] A:910 [C] ❌ 7RYG_L_A
H:87 [LEU] 0:1002 [G] L:66 [ILE] A:904 [U] ❌ 7RYG_L_A
H:156 [LYS] 0:2501 [G] L:124 [LYS] A:2462 [C] ❌ 7RYG_L_A
H:92 [HIS] 0:966 [U] L:71 [ASP] A:869 [U] ❌ 7RYG_L_A
H:92 [HIS] 0:1003 [U] L:71 [ASP] A:905 [G] ❌ 7RYG_L_A
H:90 [PHE] 0:1002 [G] L:69 [PHE] A:904 [U] ❌ 7RYG_L_A
H:90 [PHE] 0:1003 [U] L:69 [PHE] A:905 [G] ❌ 7RYG_L_A
H:157 [ILE] 0:1133 [A] L:125 [LEU] A:1026 [A] ❌ 7RYG_L_A
H:158 [THR] 0:1133 [A] L:126 [PRO] A:1026 [A] ❌ 7RYG_L_A
H:118 [GLY] 0:1054 [G] L:88 [GLY] A:952 [PSU] ❌ 7RYG_L_A
H:71 [ARG] 0:2517 [A] L:56 [ARG] A:2478 [A] ❌ 7RYG_L_A
H:155 [ASN] 0:1134 [G] L:123 [ALA] A:1027 [C] ❌ 7RYG_L_A
H:17 [ARG] 0:965 [A] L:7 [THR] A:868 [U] ❌ 7RYG_L_A
H:17 [ARG] 0:966 [U] L:7 [THR] A:869 [U] ❌ 7RYG_L_A
H:86 [THR] 0:1002 [G] L:65 [PHE] A:904 [U] ❌ 7RYG_L_A
H:131 [GLU] 0:1004 [C] L:101 [LYS] A:906 [C] ❌ 7RYG_L_A
H:20 [ILE] 0:1007 [A] L:10 [ARG] A:909 [A] ❌ 7RYG_L_A
H:113 [MET] 0:1054 [G] L:83 [MET] A:952 [PSU] ❌ 7RYG_L_A
H:113 [MET] 0:2310 [G] L:83 [MET] A:2272 [G] ❌ 7RYG_L_A
H:97 [GLU] 0:2494 [G] L:76 [GLU] A:2455 [A] ❌ 7RYG_L_A
H:20 [ILE] 0:2312 [G] L:10 [ARG] A:2274 [A] ❌ 1VQ8_H_0
H:131 [GLU] 0:1003 [U] L:101 [LYS] A:905 [G] ❌ 1VQ8_H_0
H:161 [CYS] 0:1133 [A] L:128 [LYS] A:1026 [A] ❌ 1VQ8_H_0
H:60 [GLY] 0:2518 [C] L:45 [ARG] A:2479 [C] ❌ 1VQ8_H_0
H:16 [ARG] 0:966 [U] L:6 [ARG] A:869 [U] ❌ 1VQ8_H_0
H:16 [ARG] 0:965 [A] L:6 [ARG] A:868 [U] ❌ 1VQ8_H_0
H:16 [ARG] 0:964 [G] L:6 [ARG] A:867 [G] ❌ 1VQ8_H_0
H:86 [THR] 0:968 [G] L:65 [PHE] A:871 [C] ❌ 1VQ8_H_0
H:87 [LEU] 0:967 [U] L:66 [ILE] A:870 [U] ❌ 1VQ8_H_0
H:18 [GLU] 0:1008 [C] L:8 [LYS] A:910 [C] ❌ 1VQ8_H_0
H:18 [GLU] 0:1005 [A] L:8 [LYS] A:907 [A] ❌ 1VQ8_H_0
H:112 [GLY] 0:2283 [G] L:82 [ARG] A:2246 [G] ❌ 1VQ8_H_0
H:115 [ALA] 0:2288 [G] L:85 [ASN] A:2251 [G] ❌ 1VQ8_H_0
H:116 [ALA] 0:2311 [A] L:86 [GLY] A:2273 [G] ❌ 1VQ8_H_0
H:114 [ARG] 0:2282 [U] L:84 [GLY] A:2245 [U] ❌ 7RYG_A:2245 no longer at interface
H:114 [ARG] 0:2285 [G] L:84 [GLY] A:2248 [G] ❌ 7RYG_A:2248 no longer at interface
H:114 [ARG] 0:2287 [C] L:84 [GLY] A:2250 [C] ❌ 7RYG_A:2250 no longer at interface
H:19 [TYR] 0:2363 [G] L:9 [PHE] A:2325 [A] ❌ 7RYG_A:2325 no longer at interface
H:155 [ASN] 0:1135 [G] L:123 [ALA] A:1028 [G] ❌ 7RYG_A:1028 no longer at interface
H:154 [TYR] 0:1135 [G] L:122 [ALA] A:1028 [G] ❌ 7RYG_L:122, 7RYG_A:1028 no longer at interface
H:111 [ASP] 0:2529 [G] L:81 [VAL] A:2490 [G] ❌ 1VQ8_0:2529 no longer at interface
H:112 [GLY] 0:2284 [G] L:82 [ARG] A:2247 [OMG] ❌ 1VQ8_0:2284 no longer at interface
H:113 [MET] 0:1060 [C] L:83 [MET] A:959 [G] ❌ 1VQ8_0:1060 no longer at interface
H:126 [ARG] 0:1004 [C] L:96 [GLU] A:906 [C] ❌ 7RYG_L:96 no longer at interface
H:159 [PRO] 0:1133 [A] L:127 [PHE] A:1026 [A] ❌ 7RYG_L:127 no longer at interface
H:159 [PRO] 0:1134 [G] L:127 [PHE] A:1027 [C] ❌ 7RYG_L:127 no longer at interface
H:154 [TYR] 0:1133 [A] L:122 [ALA] A:1026 [A] ❌ 7RYG_L:122 no longer at interface
H:154 [TYR] 0:1134 [G] L:122 [ALA] A:1027 [C] ❌ 7RYG_L:122 no longer at interface
H:89 [LYS] 0:1002 [G] L:68 [VAL] A:904 [U] ❌ 7RYG_L:68 no longer at interface
H:89 [LYS] 0:1003 [U] L:68 [VAL] A:905 [G] ❌ 7RYG_L:68 no longer at interface
H:89 [LYS] 0:1004 [C] L:68 [VAL] A:906 [C] ❌ 7RYG_L:68 no longer at interface
H:21 [THR] 0:2312 [G] L:11 [LYS] A:2274 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2311 [A] L:11 [LYS] A:2273 [G] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1007 [A] L:11 [LYS] A:909 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1006 [A] L:11 [LYS] A:908 [A] ❌ 1VQ8_H:21 no longer at interface
H:149 [ALA] 0:2502 [C] L:120 [LEU] A:2463 [C] ❌ 1VQ8_H:149 no longer at interface
H:149 [ALA] 0:2503 [A] L:120 [LEU] A:2464 [A] ❌ 1VQ8_H:149 no longer at interface
H:39 [ASP] 0:1001 [U] L:29 [PHE] A:903 [A] ❌ 1VQ8_H:39 no longer at interface
H:39 [ASP] 0:1002 [G] L:29 [PHE] A:904 [U] ❌ 1VQ8_H:39 no longer at interface
H:73 [LEU] 0:2504 [A] L:57 [ARG] A:2465 [A] ❌ 1VQ8_H:73 no longer at interface
H:84 [LYS] 0:968 [G] L:63 [LYS] A:871 [C] ❌ 1VQ8_H:84 no longer at interface
H:84 [LYS] 0:969 [G] L:63 [LYS] A:872 [G] ❌ 1VQ8_H:84 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.91 3.04 0.16 0.73 0.92 0.58 0.84 0.62 0.52 0.18 0.39


Other pairs involving 1VQ8_H_0 or 7RYG_L_A

Total number of entries: 19

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_N_2 7RYG_L_A 0.76 0.78 2.39 0.16 Ribosomal protein L10e compare
4Y4O_1Q_1A 7RYG_L_A 0.80 0.96 2.45 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7RYG_L_A 0.80 0.98 1.68 0.53 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7RYG_L_A 0.92 0.99 2.02 0.84 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 7K00_l_a 0.62 0.9 2.5 0.14 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_1 0.65 0.77 1.62 0.24 Ribosomal protein L10e compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7N1P_LP_23 0.63 0.91 2.2 0.16 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_2 0.89 0.81 1.6 0.39 Ribosomal protein L10e compare
1VQ8_H_0 7RYG_L_A 0.62 0.91 3.04 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7PJS_M_A 0.64 0.91 2.21 0.16 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
1VQ8_H_0 1YHQ_H_0 1.00 1.0 0.26 1.0 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 6S0Z_K_A 0.67 0.92 2.67 0.18 Ribosomal protein L10e compare
6AZ3_N_1 7RYG_L_A 0.50 0.68 2.8 0.07 Ribosomal protein L10e compare
1YHQ_H_0 7RYG_L_A 0.61 0.91 3.14 0.16 Ribosomal protein L10e compare
1JJ2_H_0 7RYG_L_A 0.60 0.91 3.14 0.18 Ribosomal protein L10e compare
1JJ2_H_0 1VQ8_H_0 0.97 1.0 0.39 0.66 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare