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All interfaces > All interologs > Interface groups > group138 > 4Y4O_1Q_1A vs 7O7Y_BI_B5

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

4Y4O_1Q
4Y4O_1A
7O7Y_BI
7O7Y_B5
Conserved?
1Q:9 [TYR] 1A:957 [A] BI:22 [PHE] B5:1727 [A] ✔
1Q:9 [TYR] 1A:958 [C] BI:22 [PHE] B5:1728 [C] ✔
1Q:9 [TYR] 1A:2290 [A] BI:22 [PHE] B5:3970 [A] ✔
1Q:71 [ASP] 1A:917 [A] BI:94 [PHE] B5:1685 [A] ✔
1Q:71 [ASP] 1A:954 [C] BI:94 [PHE] B5:1724 [C] ✔
1Q:67 [ARG] 1A:952 [G] BI:90 [ARG] B5:1722 [C] ✔
1Q:67 [ARG] 1A:953 [U] BI:90 [ARG] B5:1723 [U] ✔
1Q:65 [PHE] 1A:920 [G] BI:88 [ARG] B5:1688 [A] ✔
1Q:125 [LEU] 1A:2496 [G] BI:159 [PHE] B5:4176 [G] ✔
1Q:125 [LEU] 1A:2497 [G] BI:159 [PHE] B5:4177 [PSU] ✔
1Q:88 [GLY] 1A:1000 [C] BI:120 [GLY] B5:1803 [G] ✔
1Q:88 [GLY] 1A:1001 [G] BI:120 [GLY] B5:1804 [G] ✔
1Q:85 [LYS] 1A:2262 [G] BI:117 [GLY] B5:3941 [G] ✔
1Q:85 [LYS] 1A:2287 [C] BI:117 [GLY] B5:3967 [C] ✔
1Q:85 [LYS] 1A:2288 [G] BI:117 [GLY] B5:3968 [G] ✔
1Q:56 [ARG] 1A:2481 [A] BI:74 [LYS] B5:4161 [A] ✔
1Q:56 [ARG] 1A:2494 [G] BI:74 [LYS] B5:4174 [A] ✔
1Q:43 [THR] 1A:2497 [G] BI:61 [SER] B5:4177 [PSU] ✔
1Q:49 [ALA] 1A:2495 [C] BI:67 [ALA] B5:4175 [C] ✔
1Q:49 [ALA] 1A:2496 [G] BI:67 [ALA] B5:4176 [G] ✔
1Q:79 [LEU] 1A:2471 [A] BI:102 [MET] B5:4151 [G] ✔
1Q:63 [LYS] 1A:920 [G] BI:86 [HIS] B5:1688 [A] ✔
1Q:101 [ARG] 1A:953 [U] BI:133 [GLN] B5:1723 [U] ✔
1Q:101 [ARG] 1A:954 [C] BI:133 [GLN] B5:1724 [C] ✔
1Q:87 [LYS] 1A:1000 [C] BI:119 [PHE] B5:1803 [G] ✔
1Q:87 [LYS] 1A:1001 [G] BI:119 [PHE] B5:1804 [G] ✔
1Q:87 [LYS] 1A:2288 [G] BI:119 [PHE] B5:3968 [G] ✔
1Q:87 [LYS] 1A:2289 [G] BI:119 [PHE] B5:3969 [C] ✔
1Q:11 [LYS] 1A:2290 [A] BI:24 [ARG] B5:3970 [A] ✔
1Q:48 [GLU] 1A:2495 [C] BI:66 [GLU] B5:4175 [C] ✔
1Q:8 [LYS] 1A:958 [C] BI:21 [ARG] B5:1728 [C] ✔
1Q:127 [ILE] 1A:1076 [G] BI:161 [GLY] B5:1883 [A] ✔
1Q:124 [LYS] 1A:2479 [C] BI:158 [LYS] B5:4159 [C] ✔
1Q:124 [LYS] 1A:2494 [G] BI:158 [LYS] B5:4174 [A] ✔
1Q:124 [LYS] 1A:2495 [C] BI:158 [LYS] B5:4175 [C] ✔
1Q:124 [LYS] 1A:2496 [G] BI:158 [LYS] B5:4176 [G] ✔
1Q:124 [LYS] 1A:2497 [G] BI:158 [LYS] B5:4177 [PSU] ✔
1Q:69 [PHE] 1A:918 [U] BI:92 [HIS] B5:1686 [U] ✔
1Q:69 [PHE] 1A:919 [A] BI:92 [HIS] B5:1687 [U] ✔
1Q:45 [GLN] 1A:2495 [C] BI:63 [GLU] B5:4175 [C] ✔
1Q:45 [GLN] 1A:2496 [G] BI:63 [GLU] B5:4176 [G] ✔
1Q:6 [ARG] 1A:917 [A] BI:19 [LYS] B5:1685 [A] ✔
1Q:83 [MET] 1A:1001 [G] BI:115 [MET] B5:1804 [G] ✔
1Q:83 [MET] 1A:1004 [A] BI:115 [MET] B5:1806 [A] ✔
1Q:83 [MET] 1A:1005 [A] BI:115 [MET] B5:1807 [A] ✔
1Q:83 [MET] 1A:1007 [G] BI:115 [MET] B5:1809 [C] ✔
1Q:83 [MET] 1A:2262 [G] BI:115 [MET] B5:3941 [G] ✔
1Q:83 [MET] 1A:2507 [G] BI:115 [MET] B5:4187 [A] ✔
1Q:83 [MET] 1A:2508 [C] BI:115 [MET] B5:4188 [PSU] ✔
1Q:82 [ARG] 1A:2507 [G] BI:114 [GLY] B5:4187 [A] ✔
1Q:82 [ARG] 1A:2508 [C] BI:114 [GLY] B5:4188 [PSU] ✔
1Q:119 [ARG] 1A:1077 [G] BI:153 [ARG] B5:1884 [G] ✔
1Q:119 [ARG] 1A:2480 [G] BI:153 [ARG] B5:4160 [A] ✔
1Q:77 [LYS] 1A:1001 [G] BI:100 [ASN] B5:1804 [G] ✔
1Q:77 [LYS] 1A:1002 [A] BI:100 [ASN] B5:1805 [U] ✔
1Q:76 [LYS] 1A:1002 [A] BI:99 [ILE] B5:1805 [U] ✔
1Q:126 [PRO] 1A:2497 [G] BI:160 [PRO] B5:4177 [PSU] ✔
1Q:126 [PRO] 1A:2498 [G] BI:160 [PRO] B5:4178 [C] ✔
1Q:80 [GLU] 1A:2505 [U] BI:103 [LEU] B5:4185 [U] ✔
1Q:80 [GLU] 1A:2506 [G] BI:103 [LEU] B5:4186 [G] ✔
1Q:120 [ILE] 1A:2479 [C] BI:154 [ARG] B5:4159 [C] ✔
1Q:120 [ILE] 1A:2480 [G] BI:154 [ARG] B5:4160 [A] ✔
1Q:120 [ILE] 1A:2481 [A] BI:154 [ARG] B5:4161 [A] ✔
1Q:46 [GLN] 1A:2496 [G] BI:64 [ALA] B5:4176 [G] ✔
1Q:46 [GLN] 1A:2497 [G] BI:64 [ALA] B5:4177 [PSU] ✔
1Q:75 [THR] 1A:1001 [G] BI:98 [ARG] B5:1804 [G] ✔
1Q:75 [THR] 1A:1002 [A] BI:98 [ARG] B5:1805 [U] ✔
1Q:81 [VAL] 1A:2506 [G] BI:112 [GLN] B5:4186 [G] ✔
1Q:81 [VAL] 1A:2507 [G] BI:112 [GLN] B5:4187 [A] ✔
1Q:86 [GLY] 1A:1000 [C] BI:118 [ALA] B5:1803 [G] ✔
1Q:86 [GLY] 1A:1001 [G] BI:118 [ALA] B5:1804 [G] ✔
1Q:86 [GLY] 1A:2288 [G] BI:118 [ALA] B5:3968 [G] ✔
1Q:84 [GLY] 1A:2262 [G] BI:116 [ARG] B5:3941 [G] ✔
1Q:84 [GLY] 1A:2287 [C] BI:116 [ARG] B5:3967 [C] ✔
1Q:84 [GLY] 1A:2288 [G] BI:116 [ARG] B5:3968 [G] ✔
1Q:123 [HIS] 1A:1076 [G] BI:157 [PHE] B5:1883 [A] ✔
1Q:123 [HIS] 1A:1077 [G] BI:157 [PHE] B5:1884 [G] ✔
1Q:123 [HIS] 1A:2478 [C] BI:157 [PHE] B5:4158 [C] ✔
1Q:123 [HIS] 1A:2479 [C] BI:157 [PHE] B5:4159 [C] ✔
1Q:123 [HIS] 1A:2496 [G] BI:157 [PHE] B5:4176 [G] ✔
1Q:123 [HIS] 1A:2497 [G] BI:157 [PHE] B5:4177 [PSU] ✔
1Q:71 [ASP] 1A:955 [A] BI:94 [PHE] B5:1725 [A] ❌ 7O7Y_BI_B5
1Q:52 [VAL] 1A:2494 [G] BI:70 [ILE] B5:4174 [A] ❌ 7O7Y_BI_B5
1Q:88 [GLY] 1A:1002 [A] BI:120 [GLY] B5:1805 [U] ❌ 7O7Y_BI_B5
1Q:85 [LYS] 1A:2267 [G] BI:117 [GLY] B5:3946 [G] ❌ 7O7Y_BI_B5
1Q:79 [LEU] 1A:2472 [U] BI:102 [MET] B5:4152 [U] ❌ 7O7Y_BI_B5
1Q:63 [LYS] 1A:921 [G] BI:86 [HIS] B5:1689 [G] ❌ 7O7Y_BI_B5
1Q:128 [LYS] 1A:1076 [G] BI:162 [ARG] B5:1883 [A] ❌ 7O7Y_BI_B5
1Q:11 [LYS] 1A:956 [A] BI:24 [ARG] B5:1726 [A] ❌ 7O7Y_BI_B5
1Q:11 [LYS] 1A:957 [A] BI:24 [ARG] B5:1727 [A] ❌ 7O7Y_BI_B5
1Q:11 [LYS] 1A:2289 [G] BI:24 [ARG] B5:3969 [C] ❌ 7O7Y_BI_B5
1Q:69 [PHE] 1A:917 [A] BI:92 [HIS] B5:1685 [A] ❌ 7O7Y_BI_B5
1Q:6 [ARG] 1A:918 [U] BI:19 [LYS] B5:1686 [U] ❌ 7O7Y_BI_B5
1Q:82 [ARG] 1A:2262 [G] BI:114 [GLY] B5:3941 [G] ❌ 7O7Y_BI_B5
1Q:82 [ARG] 1A:2263 [OMG] BI:114 [GLY] B5:3942 [OMG] ❌ 7O7Y_BI_B5
1Q:82 [ARG] 1A:2264 [G] BI:114 [GLY] B5:3943 [G] ❌ 7O7Y_BI_B5
1Q:82 [ARG] 1A:2463 [A] BI:114 [GLY] B5:4143 [A] ❌ 7O7Y_BI_B5
1Q:119 [ARG] 1A:2479 [C] BI:153 [ARG] B5:4159 [C] ❌ 7O7Y_BI_B5
1Q:76 [LYS] 1A:2471 [A] BI:99 [ILE] B5:4151 [G] ❌ 7O7Y_BI_B5
1Q:76 [LYS] 1A:2472 [U] BI:99 [ILE] B5:4152 [U] ❌ 7O7Y_BI_B5
1Q:80 [GLU] 1A:2507 [G] BI:103 [LEU] B5:4187 [A] ❌ 7O7Y_BI_B5
1Q:7 [MET] 1A:917 [A] BI:20 [SER] B5:1685 [A] ❌ 7O7Y_BI_B5
1Q:66 [ILE] 1A:919 [A] BI:89 [VAL] B5:1687 [U] ❌ 7O7Y_BI_B5
1Q:86 [GLY] 1A:2287 [C] BI:118 [ALA] B5:3967 [C] ❌ 7O7Y_BI_B5
1Q:86 [GLY] 1A:2289 [G] BI:118 [ALA] B5:3969 [C] ❌ 7O7Y_BI_B5
1Q:79 [LEU] 1A:2507 [G] BI:102 [MET] B5:4187 [A] ❌ 4Y4O_1Q_1A
1Q:79 [LEU] 1A:2506 [G] BI:102 [MET] B5:4186 [G] ❌ 4Y4O_1Q_1A
1Q:80 [GLU] 1A:2471 [A] BI:103 [LEU] B5:4151 [G] ❌ 4Y4O_1Q_1A
1Q:83 [MET] 1A:1000 [C] BI:115 [MET] B5:1803 [G] ❌ 4Y4O_1Q_1A
1Q:83 [MET] 1A:2288 [G] BI:115 [MET] B5:3968 [G] ❌ 4Y4O_1Q_1A
1Q:84 [GLY] 1A:2267 [G] BI:116 [ARG] B5:3946 [G] ❌ 4Y4O_1Q_1A
1Q:84 [GLY] 1A:2508 [C] BI:116 [ARG] B5:4188 [PSU] ❌ 4Y4O_1Q_1A
1Q:84 [GLY] 1A:2264 [G] BI:116 [ARG] B5:3943 [G] ❌ 4Y4O_1Q_1A
1Q:87 [LYS] 1A:2290 [A] BI:119 [PHE] B5:3970 [A] ❌ 4Y4O_1Q_1A
1Q:87 [LYS] 1A:956 [A] BI:119 [PHE] B5:1726 [A] ❌ 4Y4O_1Q_1A
1Q:7 [MET] 1A:957 [A] BI:20 [SER] B5:1727 [A] ❌ 4Y4O_1Q_1A
1Q:8 [LYS] 1A:2290 [A] BI:21 [ARG] B5:3970 [A] ❌ 4Y4O_1Q_1A
1Q:43 [THR] 1A:2496 [G] BI:61 [SER] B5:4176 [G] ❌ 4Y4O_1Q_1A
1Q:45 [GLN] 1A:2497 [G] BI:63 [GLU] B5:4177 [PSU] ❌ 4Y4O_1Q_1A
1Q:52 [VAL] 1A:2495 [C] BI:70 [ILE] B5:4175 [C] ❌ 4Y4O_1Q_1A
1Q:65 [PHE] 1A:951 [U] BI:88 [ARG] B5:1721 [PSU] ❌ 4Y4O_1Q_1A
1Q:65 [PHE] 1A:952 [G] BI:88 [ARG] B5:1722 [C] ❌ 4Y4O_1Q_1A
1Q:66 [ILE] 1A:952 [G] BI:89 [VAL] B5:1722 [C] ❌ 4Y4O_1Q_1A
1Q:69 [PHE] 1A:953 [U] BI:92 [HIS] B5:1723 [U] ❌ 4Y4O_1Q_1A
1Q:69 [PHE] 1A:952 [G] BI:92 [HIS] B5:1722 [C] ❌ 4Y4O_1Q_1A
1Q:71 [ASP] 1A:918 [U] BI:94 [PHE] B5:1686 [U] ❌ 4Y4O_1Q_1A
1Q:71 [ASP] 1A:953 [U] BI:94 [PHE] B5:1723 [U] ❌ 4Y4O_1Q_1A
1Q:75 [THR] 1A:1000 [C] BI:98 [ARG] B5:1803 [G] ❌ 4Y4O_1Q_1A
1Q:60 [ARG] 1A:942 [A] BI:81 [GLY] B5:1712 [U] ❌ 7O7Y_BI:81, 7O7Y_B5:1712 no longer at interface
1Q:60 [ARG] 1A:1121 [C] BI:81 [GLY] B5:1928 [G] ❌ 7O7Y_BI:81, 7O7Y_B5:1928 no longer at interface
1Q:56 [ARG] 1A:2482 [G] BI:74 [LYS] B5:4162 [G] ❌ 7O7Y_B5:4162 no longer at interface
1Q:130 [LYS] 1A:1164 [C] BI:164 [LYS] B5:1971 [U] ❌ 7O7Y_BI:164, 7O7Y_B5:1971 no longer at interface
1Q:128 [LYS] 1A:1074 [A] BI:162 [ARG] B5:1881 [A] ❌ 7O7Y_B5:1881 no longer at interface
1Q:128 [LYS] 1A:1075 [A] BI:162 [ARG] B5:1882 [A] ❌ 7O7Y_B5:1882 no longer at interface
1Q:8 [LYS] 1A:915 [U] BI:21 [ARG] B5:1683 [PSU] ❌ 7O7Y_B5:1683 no longer at interface
1Q:8 [LYS] 1A:916 [G] BI:21 [ARG] B5:1684 [G] ❌ 7O7Y_B5:1684 no longer at interface
1Q:59 [ARG] 1A:1120 [G] BI:78 [LYS] B5:1927 [G] ❌ 7O7Y_BI:78, 7O7Y_B5:1927 no longer at interface
1Q:59 [ARG] 1A:1121 [C] BI:78 [LYS] B5:1928 [G] ❌ 7O7Y_BI:78, 7O7Y_B5:1928 no longer at interface
1Q:59 [ARG] 1A:2482 [G] BI:78 [LYS] B5:4162 [G] ❌ 7O7Y_BI:78, 7O7Y_B5:4162 no longer at interface
1Q:6 [ARG] 1A:916 [G] BI:19 [LYS] B5:1684 [G] ❌ 7O7Y_B5:1684 no longer at interface
1Q:82 [ARG] 1A:2462 [A] BI:114 [GLY] B5:4142 [A] ❌ 7O7Y_B5:4142 no longer at interface
1Q:7 [MET] 1A:916 [G] BI:20 [SER] B5:1684 [G] ❌ 7O7Y_B5:1684 no longer at interface
1Q:84 [GLY] 1A:2261 [U] BI:116 [ARG] B5:3940 [U] ❌ 4Y4O_1A:2261 no longer at interface
1Q:84 [GLY] 1A:2266 [C] BI:116 [ARG] B5:3945 [C] ❌ 4Y4O_1A:2266 no longer at interface
1Q:128 [LYS] 1A:1165 [C] BI:162 [ARG] B5:1972 [A] ❌ 4Y4O_1A:1165 no longer at interface
1Q:8 [LYS] 1A:2341 [G] BI:21 [ARG] B5:4021 [G] ❌ 4Y4O_1A:2341 no longer at interface
1Q:8 [LYS] 1A:2340 [A] BI:21 [ARG] B5:4020 [A] ❌ 4Y4O_1A:2340 no longer at interface
1Q:11 [LYS] 1A:2291 [G] BI:24 [ARG] B5:3971 [G] ❌ 4Y4O_1A:2291 no longer at interface
1Q:10 [ARG] 1A:2290 [A] BI:23 [CYS] B5:3970 [A] ❌ 7O7Y_BI:23 no longer at interface
1Q:29 [PHE] 1A:919 [A] BI:47 [PRO] B5:1687 [U] ❌ 7O7Y_BI:47 no longer at interface
1Q:29 [PHE] 1A:951 [U] BI:47 [PRO] B5:1721 [PSU] ❌ 7O7Y_BI:47 no longer at interface
1Q:29 [PHE] 1A:952 [G] BI:47 [PRO] B5:1722 [C] ❌ 7O7Y_BI:47 no longer at interface
1Q:74 [TYR] 1A:1002 [A] BI:97 [ILE] B5:1805 [U] ❌ 7O7Y_BI:97 no longer at interface
1Q:96 [VAL] 1A:954 [C] BI:128 [ARG] B5:1724 [C] ❌ 4Y4O_1Q:96 no longer at interface
1Q:138 [ASP] 1A:951 [U] BI:175 [LYS] B5:1721 [PSU] ❌ 4Y4O_1Q:138 no longer at interface
1Q:68 [ILE] 1A:954 [C] BI:91 [LEU] B5:1724 [C] ❌ 4Y4O_1Q:68 no longer at interface
1Q:68 [ILE] 1A:953 [U] BI:91 [LEU] B5:1723 [U] ❌ 4Y4O_1Q:68 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.89 2.42 0.12 0.74 0.89 0.59 0.74 0.68 0.56 0.20 0.38


Other pairs involving 4Y4O_1Q_1A or 7O7Y_BI_B5

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_N_2 7O7Y_BI_B5 0.88 0.92 1.34 0.77 Ribosomal protein L10e Eukaryotic large subunit ribosomal RNA compare
4Y4O_1Q_1A 7N1P_LP_23 0.84 0.97 0.77 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7RYG_L_A 0.80 0.96 2.45 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7OF0_N_A 0.56 0.93 2.96 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7O7Y_BI_B5 0.68 0.89 2.42 0.12 Ribosomal protein L10e compare
4Y4O_1Q_1A 6AZ3_N_2 0.77 0.79 2.36 0.16 Ribosomal protein L10e compare
4Y4O_1Q_1A 4YBB_DN_DA 0.82 0.97 0.96 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 6S0Z_K_A 0.83 0.97 1.53 0.64 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7PJS_M_A 0.84 0.97 0.9 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 6AZ3_N_1 0.52 0.69 2.93 0.07 Ribosomal protein L10e compare
4Y4O_1Q_1A 7K00_l_a 0.85 0.97 0.85 0.55 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7O7Y_BI_B5 0.71 0.89 2.81 0.11 Ribosomal protein L10e compare
4YBB_DN_DA 7O7Y_BI_B5 0.72 0.88 2.4 0.14 Ribosomal protein L10e compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
6AZ3_N_1 7O7Y_BI_B5 0.83 0.92 1.32 0.71 Ribosomal protein L10e Eukaryotic large subunit ribosomal RNA compare
1YHQ_H_0 4Y4O_1Q_1A 0.66 0.92 2.12 0.18 Ribosomal protein L10e compare
1YHQ_H_0 7O7Y_BI_B5 0.79 0.94 1.35 0.36 Ribosomal protein L10e compare
1JJ2_H_0 4Y4O_1Q_1A 0.64 0.92 2.15 0.2 Ribosomal protein L10e compare
1JJ2_H_0 7O7Y_BI_B5 0.78 0.94 1.36 0.39 Ribosomal protein L10e compare