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All interfaces > All interologs > Interface groups > group138 > 4YBB_DN_DA vs 7OF0_N_A

Interface analysis


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Common contacts -

4YBB_DN
4YBB_DA
7OF0_N
7OF0_A
Conserved?
DN:40 [ARG] DA:958 [U] N:96 [TYR] A:2111 [C] ✔
DN:55 [ARG] DA:2469 [A] N:111 [ARG] A:2956 [A] ✔
DN:48 [ALA] DA:2483 [C] N:104 [MET] A:2970 [C] ✔
DN:48 [ALA] DA:2484 [G] N:104 [MET] A:2971 [A] ✔
DN:18 [ARG] DA:952 [G] N:73 [ARG] A:2104 [A] ✔
DN:119 [LEU] DA:2467 [C] N:178 [GLN] A:2954 [C] ✔
DN:45 [GLN] DA:2484 [G] N:101 [HIS] A:2971 [A] ✔
DN:45 [GLN] DA:2485 [G] N:101 [HIS] A:2972 [A] ✔
DN:124 [LEU] DA:2484 [G] N:183 [LEU] A:2971 [A] ✔
DN:124 [LEU] DA:2485 [G] N:183 [LEU] A:2972 [A] ✔
DN:123 [LYS] DA:2467 [C] N:182 [LYS] A:2954 [C] ✔
DN:123 [LYS] DA:2482 [A] N:182 [LYS] A:2969 [A] ✔
DN:123 [LYS] DA:2483 [C] N:182 [LYS] A:2970 [C] ✔
DN:123 [LYS] DA:2484 [G] N:182 [LYS] A:2971 [A] ✔
DN:123 [LYS] DA:2485 [G] N:182 [LYS] A:2972 [A] ✔
DN:125 [PRO] DA:2485 [G] N:184 [PRO] A:2972 [A] ✔
DN:125 [PRO] DA:2486 [C] N:184 [PRO] A:2973 [U] ✔
DN:44 [ARG] DA:2483 [C] N:100 [GLY] A:2970 [C] ✔
DN:44 [ARG] DA:2484 [G] N:100 [GLY] A:2971 [A] ✔
DN:122 [ALA] DA:2485 [G] N:181 [HIS] A:2972 [A] ✔
DN:16 [ARG] DA:953 [G] N:71 [ASP] A:2105 [G] ❌ 7OF0_N_A
DN:16 [ARG] DA:958 [U] N:71 [ASP] A:2111 [C] ❌ 7OF0_N_A
DN:51 [ARG] DA:2483 [C] N:107 [LEU] A:2970 [C] ❌ 7OF0_N_A
DN:42 [THR] DA:2485 [G] N:98 [HIS] A:2972 [A] ❌ 7OF0_N_A
DN:119 [LEU] DA:2468 [A] N:178 [GLN] A:2955 [U] ❌ 7OF0_N_A
DN:122 [ALA] DA:2467 [C] N:181 [HIS] A:2954 [C] ❌ 7OF0_N_A
DN:122 [ALA] DA:2484 [G] N:181 [HIS] A:2971 [A] ❌ 7OF0_N_A
DN:48 [ALA] DA:2482 [A] N:104 [MET] A:2969 [A] ❌ 4YBB_DN_DA
DN:51 [ARG] DA:2469 [A] N:107 [LEU] A:2956 [A] ❌ 4YBB_DN_DA
DN:55 [ARG] DA:2468 [A] N:111 [ARG] A:2955 [U] ❌ 4YBB_DN_DA
DN:18 [ARG] DA:953 [G] N:73 [ARG] A:2105 [G] ❌ 4YBB_DN_DA
DN:42 [THR] DA:2459 [A] N:98 [HIS] A:2946 [A] ❌ 4YBB_DN_DA
DN:16 [ARG] DA:954 [G] N:71 [ASP] A:2106 [A] ❌ 7OF0_A:2106 no longer at interface
DN:55 [ARG] DA:2470 [G] N:111 [ARG] A:2957 [G] ❌ 7OF0_A:2957 no longer at interface
DN:8 [LYS] DA:912 [C] N:62 [VAL] A:2067 [C] ❌ 7OF0_A:2067 no longer at interface
DN:9 [PHE] DA:912 [C] N:63 [ARG] A:2067 [C] ❌ 7OF0_A:2067 no longer at interface
DN:9 [PHE] DA:2278 [A] N:63 [ARG] A:2842 [C] ❌ 7OF0_A:2842 no longer at interface
DN:15 [GLY] DA:954 [G] N:70 [SER] A:2106 [A] ❌ 7OF0_N:70, 7OF0_A:2106 no longer at interface
DN:122 [ALA] DA:2466 [C] N:181 [HIS] A:2953 [U] ❌ 7OF0_A:2953 no longer at interface
DN:47 [GLU] DA:2483 [C] N:103 [GLU] A:2970 [C] ❌ 7OF0_N:103 no longer at interface
DN:15 [GLY] DA:953 [G] N:70 [SER] A:2105 [G] ❌ 7OF0_N:70 no longer at interface
DN:15 [GLY] DA:958 [U] N:70 [SER] A:2111 [C] ❌ 7OF0_N:70 no longer at interface
DN:17 [ASN] DA:958 [U] N:72 [ILE] A:2111 [C] ❌ 7OF0_N:72 no longer at interface
DN:71 [LYS] DA:957 [C] N:129 [LYS] A:2110 [A] ❌ 4YBB_DN:71 no longer at interface
DN:71 [LYS] DA:958 [U] N:129 [LYS] A:2111 [C] ❌ 4YBB_DN:71 no longer at interface
DN:72 [PRO] DA:957 [C] N:130 [PRO] A:2110 [A] ❌ 4YBB_DN:72 no longer at interface
DN:73 [ILE] DA:2459 [A] N:131 [ILE] A:2946 [A] ❌ 4YBB_DN:73 no longer at interface
DN:73 [ILE] DA:957 [C] N:131 [ILE] A:2110 [A] ❌ 4YBB_DN:73 no longer at interface
DN:91 [TYR] DA:2460 [U] N:149 [HIS] A:2947 [U] ❌ 4YBB_DN:91 no longer at interface
DN:39 [GLY] DA:958 [U] N:95 [GLY] A:2111 [C] ❌ 4YBB_DN:39 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e Bacterial large subunit ribosomal RNA 0.92 3.28 0.15 0.72 0.96 0.55 0.61 0.57 0.49 0.27 0.60


Other pairs involving 4YBB_DN_DA or 7OF0_N_A

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1Q_1A 7OF0_N_A 0.56 0.93 2.96 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 4YBB_DN_DA 0.82 0.97 0.96 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
6S0Z_K_A 7OF0_N_A 0.67 0.92 3.4 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7RYG_L_A 0.92 0.99 2.02 0.84 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7N1P_LP_23 0.98 0.99 0.58 1.0 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 6AZ3_N_2 0.74 0.8 2.18 0.16 Ribosomal protein L10e compare
4YBB_DN_DA 7OF0_N_A 0.57 0.92 3.28 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 6S0Z_K_A 0.83 0.96 1.48 0.5 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7O7Y_BI_B5 0.72 0.88 2.4 0.14 Ribosomal protein L10e compare
4YBB_DN_DA 6AZ3_N_1 0.55 0.69 3.25 0.07 Ribosomal protein L10e compare
4YBB_DN_DA 7PJS_M_A 0.98 0.99 0.89 0.93 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4YBB_DN_DA 7K00_l_a 0.97 1.0 0.27 0.96 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
7OF0_N_A 7PJS_M_A 0.63 0.92 3.28 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
1YHQ_H_0 4YBB_DN_DA 0.62 0.91 2.28 0.16 Ribosomal protein L10e compare
1JJ2_H_0 4YBB_DN_DA 0.62 0.91 2.29 0.18 Ribosomal protein L10e compare