Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Interface
show interface as licoriceCommon contacts -
6AZ3_N
|
6AZ3_1
|
7O7Y_BI
|
7O7Y_B5
|
Conserved?
|
---|---|---|---|---|
N:9 [TYR] | 1:1185 [U] | BI:9 [TYR] | B5:1805 [U] | ✔ |
N:128 [ARG] | 1:1096 [C] | BI:128 [ARG] | B5:1724 [C] | ✔ |
N:4 [ARG] | 1:1185 [U] | BI:4 [ARG] | B5:1805 [U] | ✔ |
N:34 [PHE] | 1:1059 [U] | BI:34 [PHE] | B5:1687 [U] | ✔ |
N:40 [ARG] | 1:1061 [G] | BI:40 [LYS] | B5:1689 [G] | ✔ |
N:40 [ARG] | 1:1062 [A] | BI:40 [LYS] | B5:1690 [A] | ✔ |
N:193 [ARG] | 1:1061 [G] | BI:193 [ASP] | B5:1689 [G] | ✔ |
N:193 [ARG] | 1:1062 [A] | BI:193 [ASP] | B5:1690 [A] | ✔ |
N:193 [ARG] | 1:1091 [A] | BI:193 [ASP] | B5:1719 [A] | ✔ |
N:193 [ARG] | 1:1092 [U] | BI:193 [ASP] | B5:1720 [PSU] | ✔ |
N:17 [TYR] | 1:1098 [A] | BI:17 [TYR] | B5:1726 [A] | ✔ |
N:17 [TYR] | 1:1099 [A] | BI:17 [TYR] | B5:1727 [A] | ✔ |
N:88 [ARG] | 1:1060 [A] | BI:88 [ARG] | B5:1688 [A] | ✔ |
N:88 [ARG] | 1:1093 [U] | BI:88 [ARG] | B5:1721 [PSU] | ✔ |
N:88 [ARG] | 1:1094 [C] | BI:88 [ARG] | B5:1722 [C] | ✔ |
N:22 [PHE] | 1:1099 [A] | BI:22 [PHE] | B5:1727 [A] | ✔ |
N:22 [PHE] | 1:1100 [C] | BI:22 [PHE] | B5:1728 [C] | ✔ |
N:99 [ILE] | 1:1185 [U] | BI:99 [ILE] | B5:1805 [U] | ✔ |
N:91 [ALA] | 1:1095 [U] | BI:91 [LEU] | B5:1723 [U] | ✔ |
N:16 [PRO] | 1:1097 [A] | BI:16 [PRO] | B5:1725 [A] | ✔ |
N:16 [PRO] | 1:1098 [A] | BI:16 [PRO] | B5:1726 [A] | ✔ |
N:20 [SER] | 1:1099 [A] | BI:20 [SER] | B5:1727 [A] | ✔ |
N:92 [HIS] | 1:1058 [U] | BI:92 [HIS] | B5:1686 [U] | ✔ |
N:92 [HIS] | 1:1059 [U] | BI:92 [HIS] | B5:1687 [U] | ✔ |
N:92 [HIS] | 1:1094 [C] | BI:92 [HIS] | B5:1722 [C] | ✔ |
N:92 [HIS] | 1:1095 [U] | BI:92 [HIS] | B5:1723 [U] | ✔ |
N:119 [PHE] | 1:1098 [A] | BI:119 [PHE] | B5:1726 [A] | ✔ |
N:119 [PHE] | 1:1183 [G] | BI:119 [PHE] | B5:1803 [G] | ✔ |
N:119 [PHE] | 1:1184 [G] | BI:119 [PHE] | B5:1804 [G] | ✔ |
N:19 [LYS] | 1:1057 [A] | BI:19 [LYS] | B5:1685 [A] | ✔ |
N:118 [ALA] | 1:1183 [G] | BI:118 [ALA] | B5:1803 [G] | ✔ |
N:118 [ALA] | 1:1184 [G] | BI:118 [ALA] | B5:1804 [G] | ✔ |
N:15 [LYS] | 1:1098 [A] | BI:15 [LYS] | B5:1726 [A] | ✔ |
N:15 [LYS] | 1:1181 [U] | BI:15 [LYS] | B5:1801 [PSU] | ✔ |
N:15 [LYS] | 1:1182 [C] | BI:15 [LYS] | B5:1802 [U] | ✔ |
N:8 [CYS] | 1:1185 [U] | BI:8 [CYS] | B5:1805 [U] | ✔ |
N:8 [CYS] | 1:1186 [A] | BI:8 [CYS] | B5:1806 [A] | ✔ |
N:94 [PHE] | 1:1057 [A] | BI:94 [PHE] | B5:1685 [A] | ✔ |
N:94 [PHE] | 1:1058 [U] | BI:94 [PHE] | B5:1686 [U] | ✔ |
N:94 [PHE] | 1:1095 [U] | BI:94 [PHE] | B5:1723 [U] | ✔ |
N:94 [PHE] | 1:1096 [C] | BI:94 [PHE] | B5:1724 [C] | ✔ |
N:194 [GLY] | 1:1061 [G] | BI:194 [GLY] | B5:1689 [G] | ✔ |
N:194 [GLY] | 1:1062 [A] | BI:194 [GLY] | B5:1690 [A] | ✔ |
N:195 [THR] | 1:1061 [G] | BI:195 [CYS] | B5:1689 [G] | ✔ |
N:39 [ARG] | 1:1060 [A] | BI:39 [LYS] | B5:1688 [A] | ✔ |
N:39 [ARG] | 1:1061 [G] | BI:39 [LYS] | B5:1689 [G] | ✔ |
N:157 [MET] | 1:1267 [G] | BI:157 [PHE] | B5:1883 [A] | ✔ |
N:157 [MET] | 1:1268 [G] | BI:157 [PHE] | B5:1884 [G] | ✔ |
N:90 [ARG] | 1:1094 [C] | BI:90 [ARG] | B5:1722 [C] | ✔ |
N:90 [ARG] | 1:1095 [U] | BI:90 [ARG] | B5:1723 [U] | ✔ |
N:18 [PRO] | 1:1097 [A] | BI:18 [PRO] | B5:1725 [A] | ✔ |
N:35 [ASP] | 1:1059 [U] | BI:35 [ASP] | B5:1687 [U] | ✔ |
N:35 [ASP] | 1:1060 [A] | BI:35 [ASP] | B5:1688 [A] | ✔ |
N:13 [LYS] | 1:1182 [C] | BI:13 [LYS] | B5:1802 [U] | ✔ |
N:13 [LYS] | 1:1184 [G] | BI:13 [LYS] | B5:1804 [G] | ✔ |
N:13 [LYS] | 1:1186 [A] | BI:13 [LYS] | B5:1806 [A] | ✔ |
N:13 [LYS] | 1:1187 [A] | BI:13 [LYS] | B5:1807 [A] | ✔ |
N:21 [ARG] | 1:1100 [C] | BI:21 [ARG] | B5:1728 [C] | ✔ |
N:98 [ARG] | 1:1183 [G] | BI:98 [ARG] | B5:1803 [G] | ✔ |
N:98 [ARG] | 1:1184 [G] | BI:98 [ARG] | B5:1804 [G] | ✔ |
N:98 [ARG] | 1:1185 [U] | BI:98 [ARG] | B5:1805 [U] | ✔ |
N:100 [ASN] | 1:1184 [G] | BI:100 [ASN] | B5:1804 [G] | ✔ |
N:100 [ASN] | 1:1185 [U] | BI:100 [ASN] | B5:1805 [U] | ✔ |
N:89 [THR] | 1:1094 [C] | BI:89 [VAL] | B5:1722 [C] | ✔ |
N:14 [ASN] | 1:1182 [C] | BI:14 [ASN] | B5:1802 [U] | ✔ |
N:14 [ASN] | 1:1183 [G] | BI:14 [ASN] | B5:1803 [G] | ✔ |
N:14 [ASN] | 1:1184 [G] | BI:14 [ASN] | B5:1804 [G] | ✔ |
N:120 [GLY] | 1:1183 [G] | BI:120 [GLY] | B5:1803 [G] | ✔ |
N:120 [GLY] | 1:1184 [G] | BI:120 [GLY] | B5:1804 [G] | ✔ |
N:161 [GLY] | 1:1267 [G] | BI:161 [GLY] | B5:1883 [A] | ✔ |
N:133 [GLN] | 1:1095 [U] | BI:133 [GLN] | B5:1723 [U] | ✔ |
N:133 [GLN] | 1:1096 [C] | BI:133 [GLN] | B5:1724 [C] | ✔ |
N:114 [GLY] | 1:1183 [G] | BI:114 [GLY] | B5:1803 [G] | ❌ 7O7Y_BI_B5 |
N:114 [GLY] | 1:1184 [G] | BI:114 [GLY] | B5:1804 [G] | ❌ 7O7Y_BI_B5 |
N:114 [GLY] | 1:1186 [A] | BI:114 [GLY] | B5:1806 [A] | ❌ 7O7Y_BI_B5 |
N:114 [GLY] | 1:1187 [A] | BI:114 [GLY] | B5:1807 [A] | ❌ 7O7Y_BI_B5 |
N:21 [ARG] | 1:1099 [A] | BI:21 [ARG] | B5:1727 [A] | ❌ 7O7Y_BI_B5 |
N:13 [LYS] | 1:1185 [U] | BI:13 [LYS] | B5:1805 [U] | ❌ 6AZ3_N_1 |
N:4 [ARG] | 1:1184 [G] | BI:4 [ARG] | B5:1804 [G] | ❌ 6AZ3_N_1 |
N:91 [ALA] | 1:1096 [C] | BI:91 [LEU] | B5:1724 [C] | ❌ 6AZ3_N_1 |
N:10 [ARG] | 1:1265 [A] | BI:10 [ARG] | B5:1881 [A] | ❌ 7O7Y_B5:1881 no longer at interface |
N:20 [SER] | 1:1056 [G] | BI:20 [SER] | B5:1684 [G] | ❌ 7O7Y_B5:1684 no longer at interface |
N:19 [LYS] | 1:1056 [G] | BI:19 [LYS] | B5:1684 [G] | ❌ 7O7Y_B5:1684 no longer at interface |
N:161 [GLY] | 1:1266 [A] | BI:161 [GLY] | B5:1882 [A] | ❌ 7O7Y_B5:1882 no longer at interface |
N:115 [MET] | 1:1189 [C] | BI:115 [MET] | B5:1809 [C] | ❌ 6AZ3_N:115, 6AZ3_1:1189 no longer at interface |
N:162 [ARG] | 1:1356 [G] | BI:162 [ARG] | B5:1972 [A] | ❌ 6AZ3_N:162, 6AZ3_1:1356 no longer at interface |
N:175 [ASN] | 1:1052 [A] | BI:175 [LYS] | B5:1680 [G] | ❌ 6AZ3_N:175, 6AZ3_1:1052 no longer at interface |
N:193 [ARG] | 1:1063 [G] | BI:193 [ASP] | B5:1691 [G] | ❌ 6AZ3_1:1063 no longer at interface |
N:199 [LEU] | 1:1052 [A] | BI:199 [TYR] | B5:1680 [G] | ❌ 6AZ3_N:199, 6AZ3_1:1052 no longer at interface |
N:130 [ARG] | 1:1096 [C] | BI:130 [HIS] | B5:1724 [C] | ❌ 7O7Y_BI:130 no longer at interface |
N:196 [HIS] | 1:1061 [G] | BI:196 [GLY] | B5:1689 [G] | ❌ 7O7Y_BI:196 no longer at interface |
N:196 [HIS] | 1:1092 [U] | BI:196 [GLY] | B5:1720 [PSU] | ❌ 7O7Y_BI:196 no longer at interface |
N:196 [HIS] | 1:1093 [U] | BI:196 [GLY] | B5:1721 [PSU] | ❌ 7O7Y_BI:196 no longer at interface |
N:41 [ALA] | 1:1061 [G] | BI:41 [ALA] | B5:1689 [G] | ❌ 7O7Y_BI:41 no longer at interface |
N:115 [MET] | 1:1183 [G] | BI:115 [MET] | B5:1803 [G] | ❌ 6AZ3_N:115 no longer at interface |
N:115 [MET] | 1:1187 [A] | BI:115 [MET] | B5:1807 [A] | ❌ 6AZ3_N:115 no longer at interface |
N:115 [MET] | 1:1186 [A] | BI:115 [MET] | B5:1806 [A] | ❌ 6AZ3_N:115 no longer at interface |
N:115 [MET] | 1:1184 [G] | BI:115 [MET] | B5:1804 [G] | ❌ 6AZ3_N:115 no longer at interface |
N:153 [ARG] | 1:1268 [G] | BI:153 [ARG] | B5:1884 [G] | ❌ 6AZ3_N:153 no longer at interface |
N:175 [ASN] | 1:1093 [U] | BI:175 [LYS] | B5:1721 [PSU] | ❌ 6AZ3_N:175 no longer at interface |
N:197 [CYS] | 1:1092 [U] | BI:197 [VAL] | B5:1720 [PSU] | ❌ 6AZ3_N:197 no longer at interface |
N:198 [LYS] | 1:1092 [U] | BI:198 [LYS] | B5:1720 [PSU] | ❌ 6AZ3_N:198 no longer at interface |
N:198 [LYS] | 1:1091 [A] | BI:198 [LYS] | B5:1719 [A] | ❌ 6AZ3_N:198 no longer at interface |
N:42 [THR] | 1:1062 [A] | BI:42 [LYS] | B5:1690 [A] | ❌ 6AZ3_N:42 no longer at interface |
N:86 [HIS] | 1:1060 [A] | BI:86 [HIS] | B5:1688 [A] | ❌ 6AZ3_N:86 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribosomal protein L10e | Eukaryotic large subunit ribosomal RNA | 0.92 | 1.32 | 0.71 | 0.97 | 0.91 | 0.93 | 0.89 | 0.83 | 0.82 | 0.26 | 0.76 |
Other pairs involving 6AZ3_N_1 or 7O7Y_BI_B5
Total number of entries: 18