Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
6AZ3_N
|
6AZ3_1
|
7RYG_L
|
7RYG_A
|
Conserved?
|
---|---|---|---|---|
N:88 [ARG] | 1:1060 [A] | L:65 [PHE] | A:871 [C] | ✔ |
N:22 [PHE] | 1:1099 [A] | L:9 [PHE] | A:909 [A] | ✔ |
N:22 [PHE] | 1:1100 [C] | L:9 [PHE] | A:910 [C] | ✔ |
N:99 [ILE] | 1:1185 [U] | L:76 [GLU] | A:954 [C] | ✔ |
N:20 [SER] | 1:1056 [G] | L:7 [THR] | A:867 [G] | ✔ |
N:92 [HIS] | 1:1058 [U] | L:69 [PHE] | A:869 [U] | ✔ |
N:92 [HIS] | 1:1059 [U] | L:69 [PHE] | A:870 [U] | ✔ |
N:119 [PHE] | 1:1183 [G] | L:87 [LYS] | A:952 [PSU] | ✔ |
N:119 [PHE] | 1:1184 [G] | L:87 [LYS] | A:953 [G] | ✔ |
N:19 [LYS] | 1:1056 [G] | L:6 [ARG] | A:867 [G] | ✔ |
N:19 [LYS] | 1:1057 [A] | L:6 [ARG] | A:868 [U] | ✔ |
N:118 [ALA] | 1:1184 [G] | L:86 [GLY] | A:953 [G] | ✔ |
N:94 [PHE] | 1:1057 [A] | L:71 [ASP] | A:868 [U] | ✔ |
N:94 [PHE] | 1:1096 [C] | L:71 [ASP] | A:906 [C] | ✔ |
N:90 [ARG] | 1:1094 [C] | L:67 [ARG] | A:904 [U] | ✔ |
N:90 [ARG] | 1:1095 [U] | L:67 [ARG] | A:905 [G] | ✔ |
N:21 [ARG] | 1:1100 [C] | L:8 [LYS] | A:910 [C] | ✔ |
N:98 [ARG] | 1:1184 [G] | L:75 [THR] | A:953 [G] | ✔ |
N:98 [ARG] | 1:1185 [U] | L:75 [THR] | A:954 [C] | ✔ |
N:100 [ASN] | 1:1184 [G] | L:77 [LYS] | A:953 [G] | ✔ |
N:100 [ASN] | 1:1185 [U] | L:77 [LYS] | A:954 [C] | ✔ |
N:120 [GLY] | 1:1184 [G] | L:88 [GLY] | A:953 [G] | ✔ |
N:133 [GLN] | 1:1095 [U] | L:101 [LYS] | A:905 [G] | ✔ |
N:114 [GLY] | 1:1183 [G] | L:82 [ARG] | A:952 [PSU] | ❌ 7RYG_L_A |
N:114 [GLY] | 1:1184 [G] | L:82 [ARG] | A:953 [G] | ❌ 7RYG_L_A |
N:114 [GLY] | 1:1186 [A] | L:82 [ARG] | A:956 [A] | ❌ 7RYG_L_A |
N:114 [GLY] | 1:1187 [A] | L:82 [ARG] | A:957 [A] | ❌ 7RYG_L_A |
N:88 [ARG] | 1:1093 [U] | L:65 [PHE] | A:903 [A] | ❌ 7RYG_L_A |
N:88 [ARG] | 1:1094 [C] | L:65 [PHE] | A:904 [U] | ❌ 7RYG_L_A |
N:20 [SER] | 1:1099 [A] | L:7 [THR] | A:909 [A] | ❌ 7RYG_L_A |
N:92 [HIS] | 1:1094 [C] | L:69 [PHE] | A:904 [U] | ❌ 7RYG_L_A |
N:92 [HIS] | 1:1095 [U] | L:69 [PHE] | A:905 [G] | ❌ 7RYG_L_A |
N:119 [PHE] | 1:1098 [A] | L:87 [LYS] | A:908 [A] | ❌ 7RYG_L_A |
N:118 [ALA] | 1:1183 [G] | L:86 [GLY] | A:952 [PSU] | ❌ 7RYG_L_A |
N:94 [PHE] | 1:1058 [U] | L:71 [ASP] | A:869 [U] | ❌ 7RYG_L_A |
N:94 [PHE] | 1:1095 [U] | L:71 [ASP] | A:905 [G] | ❌ 7RYG_L_A |
N:157 [MET] | 1:1267 [G] | L:123 [ALA] | A:1027 [C] | ❌ 7RYG_L_A |
N:21 [ARG] | 1:1099 [A] | L:8 [LYS] | A:909 [A] | ❌ 7RYG_L_A |
N:98 [ARG] | 1:1183 [G] | L:75 [THR] | A:952 [PSU] | ❌ 7RYG_L_A |
N:89 [THR] | 1:1094 [C] | L:66 [ILE] | A:904 [U] | ❌ 7RYG_L_A |
N:120 [GLY] | 1:1183 [G] | L:88 [GLY] | A:952 [PSU] | ❌ 7RYG_L_A |
N:133 [GLN] | 1:1096 [C] | L:101 [LYS] | A:906 [C] | ❌ 7RYG_L_A |
N:19 [LYS] | 1:1058 [U] | L:6 [ARG] | A:869 [U] | ❌ 6AZ3_N_1 |
N:89 [THR] | 1:1059 [U] | L:66 [ILE] | A:870 [U] | ❌ 6AZ3_N_1 |
N:21 [ARG] | 1:1097 [A] | L:8 [LYS] | A:907 [A] | ❌ 6AZ3_N_1 |
N:21 [ARG] | 1:1056 [G] | L:8 [LYS] | A:867 [G] | ❌ 6AZ3_N_1 |
N:157 [MET] | 1:1268 [G] | L:123 [ALA] | A:1028 [G] | ❌ 7RYG_A:1028 no longer at interface |
N:21 [ARG] | 1:1055 [U] | L:8 [LYS] | A:866 [U] | ❌ 6AZ3_1:1055 no longer at interface |
N:115 [MET] | 1:1189 [C] | L:83 [MET] | A:959 [G] | ❌ 6AZ3_N:115, 6AZ3_1:1189 no longer at interface |
N:128 [ARG] | 1:1096 [C] | L:96 [GLU] | A:906 [C] | ❌ 7RYG_L:96 no longer at interface |
N:130 [ARG] | 1:1096 [C] | L:98 [LYS] | A:906 [C] | ❌ 7RYG_L:98 no longer at interface |
N:91 [ALA] | 1:1095 [U] | L:68 [VAL] | A:905 [G] | ❌ 7RYG_L:68 no longer at interface |
N:161 [GLY] | 1:1266 [A] | L:127 [PHE] | A:1026 [A] | ❌ 7RYG_L:127 no longer at interface |
N:161 [GLY] | 1:1267 [G] | L:127 [PHE] | A:1027 [C] | ❌ 7RYG_L:127 no longer at interface |
N:24 [ARG] | 1:1099 [A] | L:11 [LYS] | A:909 [A] | ❌ 6AZ3_N:24 no longer at interface |
N:24 [ARG] | 1:1098 [A] | L:11 [LYS] | A:908 [A] | ❌ 6AZ3_N:24 no longer at interface |
N:163 [GLN] | 1:1267 [G] | L:128 [LYS] | A:1027 [C] | ❌ 6AZ3_N:163 no longer at interface |
N:163 [GLN] | 1:1266 [A] | L:128 [LYS] | A:1026 [A] | ❌ 6AZ3_N:163 no longer at interface |
N:43 [VAL] | 1:1093 [U] | L:29 [PHE] | A:903 [A] | ❌ 6AZ3_N:43 no longer at interface |
N:43 [VAL] | 1:1094 [C] | L:29 [PHE] | A:904 [U] | ❌ 6AZ3_N:43 no longer at interface |
N:86 [HIS] | 1:1060 [A] | L:63 [LYS] | A:871 [C] | ❌ 6AZ3_N:86 no longer at interface |
N:86 [HIS] | 1:1061 [G] | L:63 [LYS] | A:872 [G] | ❌ 6AZ3_N:86 no longer at interface |
N:115 [MET] | 1:1184 [G] | L:83 [MET] | A:953 [G] | ❌ 6AZ3_N:115 no longer at interface |
N:115 [MET] | 1:1187 [A] | L:83 [MET] | A:957 [A] | ❌ 6AZ3_N:115 no longer at interface |
N:115 [MET] | 1:1186 [A] | L:83 [MET] | A:956 [A] | ❌ 6AZ3_N:115 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribosomal protein L10e | 0.68 | 2.8 | 0.07 | 0.73 | 0.69 | 0.44 | 0.82 | 0.50 | 0.28 | 0.20 | 0.45 |
Other pairs involving 6AZ3_N_1 or 7RYG_L_A
Total number of entries: 18