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All interfaces > All interologs > Interface groups > group139 > 1JJ2_F_0 vs 4BW0_B_A

Interface analysis


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Common contacts -

1JJ2_F
1JJ2_0
4BW0_B
4BW0_A
Conserved?
F:55 [GLN] 0:263 [U] B:54 [ASP] A:19 [A] ✔
F:56 [PRO] 0:263 [U] B:55 [PRO] A:19 [A] ✔
F:90 [GLU] 0:261 [A] B:89 [GLU] A:17 [G] ✔
F:31 [LYS] 0:247 [A] B:30 [LYS] A:6 [A] ✔
F:31 [LYS] 0:262 [A] B:30 [LYS] A:18 [A] ✔
F:31 [LYS] 0:264 [G] B:30 [LYS] A:20 [G] ✔
F:92 [GLY] 0:262 [A] B:91 [PRO] A:18 [A] ✔
F:92 [GLY] 0:263 [U] B:91 [PRO] A:19 [A] ✔
F:59 [ILE] 0:263 [U] B:58 [ILE] A:19 [A] ✔
F:35 [GLU] 0:246 [G] B:34 [GLU] A:5 [G] ✔
F:35 [GLU] 0:262 [A] B:34 [GLU] A:18 [A] ✔
F:35 [GLU] 0:264 [G] B:34 [GLU] A:20 [G] ✔
F:94 [ALA] 0:262 [A] B:93 [ALA] A:18 [A] ✔
F:94 [ALA] 0:263 [U] B:93 [ALA] A:19 [A] ✔
F:32 [GLY] 0:262 [A] B:31 [GLY] A:18 [A] ✔
F:32 [GLY] 0:263 [U] B:31 [GLY] A:19 [A] ✔
F:32 [GLY] 0:264 [G] B:31 [GLY] A:20 [G] ✔
F:30 [LYS] 0:246 [G] B:29 [LYS] A:5 [G] ✔
F:38 [LYS] 0:244 [C] B:37 [LYS] A:3 [G] ✔
F:89 [LEU] 0:262 [A] B:88 [ILE] A:18 [A] ✔
F:95 [ALA] 0:263 [U] B:94 [SER] A:19 [A] ✔
F:34 [ASN] 0:246 [G] B:33 [ASN] A:5 [G] ✔
F:34 [ASN] 0:264 [G] B:33 [ASN] A:20 [G] ✔
F:93 [SER] 0:262 [A] B:92 [CYS] A:18 [A] ✔
F:93 [SER] 0:263 [U] B:92 [CYS] A:19 [A] ✔
F:33 [THR] 0:262 [A] B:32 [THR] A:18 [A] ✔
F:33 [THR] 0:263 [U] B:32 [THR] A:19 [A] ✔
F:33 [THR] 0:264 [G] B:32 [THR] A:20 [G] ✔
F:91 [VAL] 0:261 [A] B:90 [VAL] A:17 [G] ✔
F:91 [VAL] 0:262 [A] B:90 [VAL] A:18 [A] ✔
F:42 [ARG] 0:244 [C] B:41 [ARG] A:3 [G] ✔
F:42 [ARG] 0:245 [C] B:41 [ARG] A:4 [G] ✔
F:80 [GLN] 0:263 [U] B:79 [LYS] A:19 [A] ✔
F:38 [LYS] 0:246 [G] B:37 [LYS] A:5 [G] ❌ 4BW0_B_A
F:34 [ASN] 0:263 [U] B:33 [ASN] A:19 [A] ❌ 1JJ2_F_0
F:34 [ASN] 0:245 [C] B:33 [ASN] A:4 [G] ❌ 1JJ2_F_0
F:35 [GLU] 0:247 [A] B:34 [GLU] A:6 [A] ❌ 1JJ2_F_0
F:38 [LYS] 0:245 [C] B:37 [LYS] A:4 [G] ❌ 1JJ2_F_0
F:38 [LYS] 0:243 [A] B:37 [LYS] A:2 [G] ❌ 4BW0_A:2 no longer at interface
F:34 [ASN] 0:242 [A] B:33 [ASN] A:1 [G] ❌ 4BW0_A:1 no longer at interface
F:34 [ASN] 0:243 [A] B:33 [ASN] A:2 [G] ❌ 4BW0_A:2 no longer at interface
F:90 [GLU] 0:248 [A] B:89 [GLU] A:7 [G] ❌ 1JJ2_0:248 no longer at interface
F:53 [ASP] 0:263 [U] B:52 [ASP] A:19 [A] ❌ 4BW0_B:52 no longer at interface
F:54 [VAL] 0:263 [U] B:53 [VAL] A:19 [A] ❌ 4BW0_B:53 no longer at interface
F:36 [THR] 0:264 [G] B:35 [THR] A:20 [G] ❌ 1JJ2_F:36 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.94 0.48 0.44 0.97 0.27 0.95 0.89 0.89 0.83 0.59 0.58


Other pairs involving 1JJ2_F_0 or 4BW0_B_A

Total number of entries: 24

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare
1JJ2_F_0 3HAX_D_E 0.97 0.8 0.65 0.56 L30e-like compare
1JJ2_F_0 2HVY_D_E 0.95 0.79 0.59 0.56 L30e-like compare
1JJ2_F_0 6Q8U_C_A,B 0.89 0.85 0.61 0.44 L30e-like compare
1JJ2_F_0 1VQ8_F_0 0.99 1.0 0.29 1.0 L30e-like Archaeal large subunit ribosomal RNA compare
1JJ2_F_0 7O7Y_BG_B5,B8 0.58 0.94 2.25 0.19 L30e-like compare
1JJ2_F_0 1YHQ_F_0 0.99 1.0 0.16 0.9 L30e-like Archaeal large subunit ribosomal RNA compare
1JJ2_F_0 4BW0_B_A 0.89 0.94 0.48 0.44 L30e-like compare
1JJ2_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
1JJ2_F_0 3LWR_C_D 0.88 0.8 0.7 0.6 L30e-like compare
1JJ2_F_0 6AZ3_G_1,7 0.72 0.68 2.27 0.19 L30e-like compare
1VQ8_F_0 4BW0_B_A 0.88 0.94 0.47 0.44 L30e-like compare
1YHQ_F_0 4BW0_B_A 0.88 0.94 0.45 0.44 L30e-like compare
2HVY_D_E 4BW0_B_A 0.83 0.91 0.45 0.56 L30e-like compare
3HAX_D_E 4BW0_B_A 0.89 0.91 0.43 0.56 L30e-like compare
3LWR_C_D 4BW0_B_A 0.78 0.89 0.54 0.56 L30e-like compare
4BW0_B_A 7OZQ_A_H 0.91 0.9 0.62 0.5 L30e-like compare
4BW0_B_A 5XTM_A_B 0.94 0.87 0.57 0.22 L30e-like compare
4BW0_B_A 7O7Y_Al_A2 0.85 0.75 1.35 0.22 L30e-like compare
4BW0_B_A 7O7Y_BG_B5,B8 0.56 0.87 1.17 0.3 L30e-like compare
4BW0_B_A 6AZ3_G_1,7 0.69 0.85 1.34 0.2 L30e-like compare
4BW0_B_A 7O7Y_Bc_B5 0.76 0.74 1.81 0.15 L30e-like compare
4BW0_B_A 6Q8U_C_A,B 0.99 0.95 0.45 1.0 L30e-like compare
4BW0_B_A 6AZ3_d_3 0.70 0.69 1.54 0.11 L30e-like compare