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All interfaces > All interologs > Interface groups > group139 > 1JJ2_F_0 vs 6AZ3_G_1,7

Interface analysis


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Common contacts -

1JJ2_F
1JJ2_0
6AZ3_G
6AZ3_1,7
Conserved?
F:55 [GLN] 0:263 [U] G:243 [ASP] 1:146 [U] ✔
F:56 [PRO] 0:263 [U] G:244 [PRO] 1:146 [U] ✔
F:53 [ASP] 0:263 [U] G:241 [ASN] 1:146 [U] ✔
F:31 [LYS] 0:262 [A] G:219 [THR] 1:145 [U] ✔
F:31 [LYS] 0:264 [G] G:219 [THR] 1:147 [G] ✔
F:92 [GLY] 0:262 [A] G:279 [THR] 1:145 [U] ✔
F:92 [GLY] 0:263 [U] G:279 [THR] 1:146 [U] ✔
F:59 [ILE] 0:263 [U] G:247 [LEU] 1:146 [U] ✔
F:35 [GLU] 0:246 [G] G:223 [GLU] 1:120 [G] ✔
F:35 [GLU] 0:262 [A] G:223 [GLU] 1:145 [U] ✔
F:35 [GLU] 0:264 [G] G:223 [GLU] 1:147 [G] ✔
F:94 [ALA] 0:263 [U] G:281 [THR] 1:146 [U] ✔
F:32 [GLY] 0:262 [A] G:220 [GLY] 1:145 [U] ✔
F:32 [GLY] 0:263 [U] G:220 [GLY] 1:146 [U] ✔
F:32 [GLY] 0:264 [G] G:220 [GLY] 1:147 [G] ✔
F:38 [LYS] 0:244 [C] G:226 [ARG] 1:118 [C] ✔
F:38 [LYS] 0:246 [G] G:226 [ARG] 1:120 [G] ✔
F:95 [ALA] 0:263 [U] G:282 [CYS] 1:146 [U] ✔
F:54 [VAL] 0:263 [U] G:242 [VAL] 1:146 [U] ✔
F:34 [ASN] 0:242 [A] G:222 [GLN] 1:115 [U] ✔
F:34 [ASN] 0:246 [G] G:222 [GLN] 1:120 [G] ✔
F:34 [ASN] 0:264 [G] G:222 [GLN] 1:147 [G] ✔
F:93 [SER] 0:263 [U] G:280 [ALA] 1:146 [U] ✔
F:33 [THR] 0:262 [A] G:221 [LEU] 1:145 [U] ✔
F:33 [THR] 0:263 [U] G:221 [LEU] 1:146 [U] ✔
F:33 [THR] 0:264 [G] G:221 [LEU] 1:147 [G] ✔
F:91 [VAL] 0:261 [A] G:278 [LYS] 1:144 [G] ✔
F:42 [ARG] 0:244 [C] G:230 [LYS] 1:118 [C] ✔
F:42 [ARG] 0:245 [C] G:230 [LYS] 1:119 [C] ✔
F:80 [GLN] 0:263 [U] G:268 [MET] 1:146 [U] ✔
F:90 [GLU] 0:261 [A] G:277 [ARG] 1:144 [G] ❌ 6AZ3_G_1,7
F:31 [LYS] 0:247 [A] G:219 [THR] 1:121 [A] ❌ 6AZ3_G_1,7
F:94 [ALA] 0:262 [A] G:281 [THR] 1:145 [U] ❌ 6AZ3_G_1,7
F:93 [SER] 0:262 [A] G:280 [ALA] 1:145 [U] ❌ 6AZ3_G_1,7
F:91 [VAL] 0:262 [A] G:278 [LYS] 1:145 [U] ❌ 6AZ3_G_1,7
F:34 [ASN] 0:245 [C] G:222 [GLN] 1:119 [C] ❌ 1JJ2_F_0
F:38 [LYS] 0:245 [C] G:226 [ARG] 1:119 [C] ❌ 1JJ2_F_0
F:90 [GLU] 0:262 [A] G:277 [ARG] 1:145 [U] ❌ 1JJ2_F_0
F:38 [LYS] 0:243 [A] G:226 [ARG] 1:116 [U] ❌ 6AZ3_1:116 no longer at interface
F:34 [ASN] 0:243 [A] G:222 [GLN] 1:116 [U] ❌ 6AZ3_1:116 no longer at interface
F:91 [VAL] 0:260 [C] G:278 [LYS] 1:143 [A] ❌ 1JJ2_0:260 no longer at interface
F:30 [LYS] 0:246 [G] G:218 [VAL] 1:120 [G] ❌ 6AZ3_G:218 no longer at interface
F:89 [LEU] 0:262 [A] G:276 [GLY] 1:145 [U] ❌ 6AZ3_G:276 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.68 2.27 0.19 0.87 0.7 0.9 0.9 0.72 0.57 0.37 0.38


Other pairs involving 1JJ2_F_0 or 6AZ3_G_1,7

Total number of entries: 21

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare
1JJ2_F_0 3HAX_D_E 0.97 0.8 0.65 0.56 L30e-like compare
1JJ2_F_0 2HVY_D_E 0.95 0.79 0.59 0.56 L30e-like compare
1JJ2_F_0 6Q8U_C_A,B 0.89 0.85 0.61 0.44 L30e-like compare
1JJ2_F_0 1VQ8_F_0 0.99 1.0 0.29 1.0 L30e-like Archaeal large subunit ribosomal RNA compare
1JJ2_F_0 7O7Y_BG_B5,B8 0.58 0.94 2.25 0.19 L30e-like compare
1JJ2_F_0 1YHQ_F_0 0.99 1.0 0.16 0.9 L30e-like Archaeal large subunit ribosomal RNA compare
1JJ2_F_0 4BW0_B_A 0.89 0.94 0.48 0.44 L30e-like compare
1JJ2_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
1JJ2_F_0 3LWR_C_D 0.88 0.8 0.7 0.6 L30e-like compare
1JJ2_F_0 6AZ3_G_1,7 0.72 0.68 2.27 0.19 L30e-like compare
5XTM_A_B 6AZ3_G_1,7 0.91 0.7 1.59 0.27 L30e-like compare
3LWR_C_D 6AZ3_G_1,7 0.66 0.73 1.54 0.26 L30e-like compare
1YHQ_F_0 6AZ3_G_1,7 0.71 0.68 2.26 0.19 L30e-like compare
4BW0_B_A 6AZ3_G_1,7 0.69 0.85 1.34 0.2 L30e-like compare
1VQ8_F_0 6AZ3_G_1,7 0.70 0.68 2.29 0.19 L30e-like compare
2HVY_D_E 6AZ3_G_1,7 0.69 0.72 1.31 0.3 L30e-like compare
3HAX_D_E 6AZ3_G_1,7 0.66 0.74 1.4 0.26 L30e-like compare
6AZ3_G_1,7 6Q8U_C_A,B 0.83 0.77 1.38 0.2 L30e-like compare
6AZ3_G_1,7 7OZQ_A_H 0.68 0.8 1.4 0.27 L30e-like compare
6AZ3_G_1,7 7O7Y_BG_B5,B8 0.69 0.93 1.08 0.38 L30e-like 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare