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All interfaces > All interologs > Interface groups > group139 > 1JJ2_F_0 vs 7O7Y_BG_B5,B8

Interface analysis


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Common contacts -

1JJ2_F
1JJ2_0
7O7Y_BG
7O7Y_B5,B8
Conserved?
F:55 [GLN] 0:263 [U] BG:162 [ASP] B5:150 [U] ✔
F:56 [PRO] 0:263 [U] BG:163 [PRO] B5:150 [U] ✔
F:90 [GLU] 0:261 [A] BG:196 [ARG] B5:148 [A] ✔
F:31 [LYS] 0:262 [A] BG:138 [ALA] B5:149 [A] ✔
F:31 [LYS] 0:264 [G] BG:138 [ALA] B5:151 [G] ✔
F:92 [GLY] 0:262 [A] BG:198 [THR] B5:149 [A] ✔
F:92 [GLY] 0:263 [U] BG:198 [THR] B5:150 [U] ✔
F:59 [ILE] 0:263 [U] BG:166 [LEU] B5:150 [U] ✔
F:35 [GLU] 0:264 [G] BG:142 [THR] B5:151 [G] ✔
F:94 [ALA] 0:262 [A] BG:200 [THR] B5:149 [A] ✔
F:94 [ALA] 0:263 [U] BG:200 [THR] B5:150 [U] ✔
F:32 [GLY] 0:262 [A] BG:139 [GLY] B5:149 [A] ✔
F:32 [GLY] 0:263 [U] BG:139 [GLY] B5:150 [U] ✔
F:32 [GLY] 0:264 [G] BG:139 [GLY] B5:151 [G] ✔
F:38 [LYS] 0:244 [C] BG:145 [THR] B5:116 [G] ✔
F:95 [ALA] 0:263 [U] BG:201 [THR] B5:150 [U] ✔
F:54 [VAL] 0:263 [U] BG:161 [VAL] B5:150 [U] ✔
F:34 [ASN] 0:243 [A] BG:141 [ASN] B5:115 [C] ✔
F:34 [ASN] 0:264 [G] BG:141 [ASN] B5:151 [G] ✔
F:93 [SER] 0:262 [A] BG:199 [CYS] B5:149 [A] ✔
F:93 [SER] 0:263 [U] BG:199 [CYS] B5:150 [U] ✔
F:33 [THR] 0:262 [A] BG:140 [VAL] B5:149 [A] ✔
F:33 [THR] 0:263 [U] BG:140 [VAL] B5:150 [U] ✔
F:33 [THR] 0:264 [G] BG:140 [VAL] B5:151 [G] ✔
F:91 [VAL] 0:261 [A] BG:197 [LYS] B5:148 [A] ✔
F:42 [ARG] 0:245 [C] BG:149 [ASN] B5:117 [C] ✔
F:80 [GLN] 0:263 [U] BG:187 [LYS] B5:150 [U] ✔
F:31 [LYS] 0:247 [A] BG:138 [ALA] B5:120 [A] ❌ 7O7Y_BG_B5,B8
F:35 [GLU] 0:246 [G] BG:142 [THR] B5:119 [G] ❌ 7O7Y_BG_B5,B8
F:35 [GLU] 0:262 [A] BG:142 [THR] B5:149 [A] ❌ 7O7Y_BG_B5,B8
F:30 [LYS] 0:246 [G] BG:137 [ARG] B5:119 [G] ❌ 7O7Y_BG_B5,B8
F:38 [LYS] 0:243 [A] BG:145 [THR] B5:115 [C] ❌ 7O7Y_BG_B5,B8
F:38 [LYS] 0:246 [G] BG:145 [THR] B5:119 [G] ❌ 7O7Y_BG_B5,B8
F:89 [LEU] 0:262 [A] BG:195 [HIS] B5:149 [A] ❌ 7O7Y_BG_B5,B8
F:34 [ASN] 0:246 [G] BG:141 [ASN] B5:119 [G] ❌ 7O7Y_BG_B5,B8
F:91 [VAL] 0:262 [A] BG:197 [LYS] B5:149 [A] ❌ 7O7Y_BG_B5,B8
F:42 [ARG] 0:244 [C] BG:149 [ASN] B5:116 [G] ❌ 7O7Y_BG_B5,B8
F:34 [ASN] 0:263 [U] BG:141 [ASN] B5:150 [U] ❌ 1JJ2_F_0
F:38 [LYS] 0:245 [C] BG:145 [THR] B5:117 [C] ❌ 1JJ2_F_0
F:89 [LEU] 0:261 [A] BG:195 [HIS] B5:148 [A] ❌ 1JJ2_F_0
F:90 [GLU] 0:262 [A] BG:196 [ARG] B5:149 [A] ❌ 1JJ2_F_0
F:34 [ASN] 0:242 [A] BG:141 [ASN] B5:114 [G] ❌ 7O7Y_B5:114 no longer at interface
F:91 [VAL] 0:260 [C] BG:197 [LYS] B5:147 [A] ❌ 1JJ2_0:260 no longer at interface
F:26 [THR] 0:246 [G] BG:133 [PRO] B5:119 [G] ❌ 1JJ2_F:26 no longer at interface
F:28 [ALA] 0:246 [G] BG:135 [VAL] B5:119 [G] ❌ 1JJ2_F:28 no longer at interface
F:36 [THR] 0:264 [G] BG:143 [VAL] B5:151 [G] ❌ 1JJ2_F:36 no longer at interface
F:41 [GLU] 0:244 [C] BG:148 [GLU] B5:116 [G] ❌ 1JJ2_F:41 no longer at interface
F:52 [GLU] 0:263 [U] BG:160 [ASP] B5:150 [U] ❌ 1JJ2_F:52 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.94 2.25 0.19 0.88 0.94 0.95 0.9 0.58 0.50 0.32 0.33


Other pairs involving 1JJ2_F_0 or 7O7Y_BG_B5,B8

Total number of entries: 22

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare
1JJ2_F_0 3HAX_D_E 0.97 0.8 0.65 0.56 L30e-like compare
1JJ2_F_0 2HVY_D_E 0.95 0.79 0.59 0.56 L30e-like compare
1JJ2_F_0 6Q8U_C_A,B 0.89 0.85 0.61 0.44 L30e-like compare
1JJ2_F_0 1VQ8_F_0 0.99 1.0 0.29 1.0 L30e-like Archaeal large subunit ribosomal RNA compare
1JJ2_F_0 7O7Y_BG_B5,B8 0.58 0.94 2.25 0.19 L30e-like compare
1JJ2_F_0 1YHQ_F_0 0.99 1.0 0.16 0.9 L30e-like Archaeal large subunit ribosomal RNA compare
1JJ2_F_0 4BW0_B_A 0.89 0.94 0.48 0.44 L30e-like compare
1JJ2_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
1JJ2_F_0 3LWR_C_D 0.88 0.8 0.7 0.6 L30e-like compare
1JJ2_F_0 6AZ3_G_1,7 0.72 0.68 2.27 0.19 L30e-like compare
5XTM_A_B 7O7Y_BG_B5,B8 0.68 0.71 1.4 0.22 L30e-like compare
6AZ3_G_2 7O7Y_BG_B5,B8 0.79 0.92 1.1 0.25 L30e-like Eukaryotic large subunit ribosomal RNA compare
3LWR_C_D 7O7Y_BG_B5,B8 0.53 0.74 1.47 0.35 L30e-like compare
1YHQ_F_0 7O7Y_BG_B5,B8 0.59 0.94 2.25 0.24 L30e-like compare
6Q8U_C_A,B 7O7Y_BG_B5,B8 0.60 0.8 1.18 0.3 L30e-like compare
4BW0_B_A 7O7Y_BG_B5,B8 0.56 0.87 1.17 0.3 L30e-like compare
1VQ8_F_0 7O7Y_BG_B5,B8 0.59 0.94 2.24 0.24 L30e-like compare
7O7Y_BG_B5,B8 7OZQ_A_H 0.65 0.83 1.34 0.36 L30e-like compare
2HVY_D_E 7O7Y_BG_B5,B8 0.55 0.71 1.77 0.4 L30e-like compare
3HAX_D_E 7O7Y_BG_B5,B8 0.54 0.76 1.46 0.39 L30e-like compare
6AZ3_G_1,7 7O7Y_BG_B5,B8 0.69 0.93 1.08 0.38 L30e-like 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare