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All interfaces > All interologs > Interface groups > group139 > 1YHQ_F_0 vs 3HAX_D_E

Interface analysis


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Common contacts -

1YHQ_F
1YHQ_0
3HAX_D
3HAX_E
Conserved?
F:55 [GLN] 0:263 [U] D:59 [ASP] E:32 [U] ✔
F:56 [PRO] 0:263 [U] D:60 [PRO] E:32 [U] ✔
F:90 [GLU] 0:261 [A] D:94 [GLU] E:30 [C] ✔
F:53 [ASP] 0:263 [U] D:57 [ASP] E:32 [U] ✔
F:31 [LYS] 0:247 [A] D:35 [LYS] E:25 [A] ✔
F:31 [LYS] 0:262 [A] D:35 [LYS] E:31 [A] ✔
F:31 [LYS] 0:264 [G] D:35 [LYS] E:33 [G] ✔
F:92 [GLY] 0:262 [A] D:96 [ALA] E:31 [A] ✔
F:92 [GLY] 0:263 [U] D:96 [ALA] E:32 [U] ✔
F:59 [ILE] 0:263 [U] D:63 [ILE] E:32 [U] ✔
F:35 [GLU] 0:246 [G] D:39 [GLU] E:24 [G] ✔
F:35 [GLU] 0:262 [A] D:39 [GLU] E:31 [A] ✔
F:35 [GLU] 0:264 [G] D:39 [GLU] E:33 [G] ✔
F:94 [ALA] 0:262 [A] D:98 [ALA] E:31 [A] ✔
F:94 [ALA] 0:263 [U] D:98 [ALA] E:32 [U] ✔
F:32 [GLY] 0:262 [A] D:36 [GLY] E:31 [A] ✔
F:32 [GLY] 0:263 [U] D:36 [GLY] E:32 [U] ✔
F:32 [GLY] 0:264 [G] D:36 [GLY] E:33 [G] ✔
F:30 [LYS] 0:246 [G] D:34 [ARG] E:24 [G] ✔
F:38 [LYS] 0:243 [A] D:42 [LYS] E:21 [G] ✔
F:38 [LYS] 0:244 [C] D:42 [LYS] E:22 [G] ✔
F:89 [LEU] 0:262 [A] D:93 [ILE] E:31 [A] ✔
F:95 [ALA] 0:263 [U] D:99 [SER] E:32 [U] ✔
F:54 [VAL] 0:263 [U] D:58 [VAL] E:32 [U] ✔
F:34 [ASN] 0:243 [A] D:38 [ASN] E:21 [G] ✔
F:34 [ASN] 0:246 [G] D:38 [ASN] E:24 [G] ✔
F:34 [ASN] 0:264 [G] D:38 [ASN] E:33 [G] ✔
F:93 [SER] 0:262 [A] D:97 [ALA] E:31 [A] ✔
F:93 [SER] 0:263 [U] D:97 [ALA] E:32 [U] ✔
F:33 [THR] 0:262 [A] D:37 [THR] E:31 [A] ✔
F:33 [THR] 0:263 [U] D:37 [THR] E:32 [U] ✔
F:33 [THR] 0:264 [G] D:37 [THR] E:33 [G] ✔
F:91 [VAL] 0:261 [A] D:95 [VAL] E:30 [C] ✔
F:91 [VAL] 0:262 [A] D:95 [VAL] E:31 [A] ✔
F:42 [ARG] 0:243 [A] D:46 [ARG] E:21 [G] ✔
F:42 [ARG] 0:244 [C] D:46 [ARG] E:22 [G] ✔
F:42 [ARG] 0:245 [C] D:46 [ARG] E:23 [U] ✔
F:80 [GLN] 0:263 [U] D:84 [LYS] E:32 [U] ✔
F:38 [LYS] 0:246 [G] D:42 [LYS] E:24 [G] ❌ 3HAX_D_E
F:31 [LYS] 0:246 [G] D:35 [LYS] E:24 [G] ❌ 1YHQ_F_0
F:34 [ASN] 0:245 [C] D:38 [ASN] E:23 [U] ❌ 1YHQ_F_0
F:34 [ASN] 0:244 [C] D:38 [ASN] E:22 [G] ❌ 1YHQ_F_0
F:90 [GLU] 0:260 [C] D:94 [GLU] E:29 [G] ❌ 3HAX_E:29 no longer at interface
F:36 [THR] 0:264 [G] D:40 [THR] E:33 [G] ❌ 1YHQ_F:36 no longer at interface
F:41 [GLU] 0:244 [C] D:45 [GLU] E:22 [G] ❌ 1YHQ_F:41 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.8 0.77 0.56 0.98 0.3 1.0 1.0 0.97 0.96 0.60 0.43


Other pairs involving 1YHQ_F_0 or 3HAX_D_E

Total number of entries: 23

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 3HAX_D_E 0.97 0.8 0.65 0.56 L30e-like compare
1JJ2_F_0 1YHQ_F_0 0.99 1.0 0.16 0.9 L30e-like Archaeal large subunit ribosomal RNA compare
1YHQ_F_0 6AZ3_G_1,7 0.71 0.68 2.26 0.19 L30e-like compare
1YHQ_F_0 4BW0_B_A 0.88 0.94 0.45 0.44 L30e-like compare
1YHQ_F_0 3HAX_D_E 0.97 0.8 0.77 0.56 L30e-like compare
1YHQ_F_0 6Q8U_C_A,B 0.88 0.85 0.58 0.44 L30e-like compare
1YHQ_F_0 2HVY_D_E 0.95 0.79 0.48 0.56 L30e-like compare
1YHQ_F_0 5XTM_A_B 0.93 0.78 0.72 0.22 L30e-like compare
1YHQ_F_0 3LWR_C_D 0.94 0.8 0.53 0.67 L30e-like compare
1YHQ_F_0 7O7Y_BG_B5,B8 0.59 0.94 2.25 0.24 L30e-like compare
1YHQ_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
1VQ8_F_0 1YHQ_F_0 0.99 1.0 0.19 0.9 L30e-like Archaeal large subunit ribosomal RNA compare
1VQ8_F_0 3HAX_D_E 0.99 0.79 0.77 0.56 L30e-like compare
2HVY_D_E 3HAX_D_E 0.98 0.93 0.24 1.0 L30e-like compare
3HAX_D_E 6AZ3_d_3 0.68 0.59 1.59 0.17 L30e-like compare
3HAX_D_E 3LWR_C_D 0.90 0.97 0.42 0.89 L30e-like compare
3HAX_D_E 6Q8U_C_A,B 0.89 0.84 0.42 0.56 L30e-like compare
3HAX_D_E 7O7Y_Bc_B5 0.76 0.63 1.73 0.13 L30e-like compare
3HAX_D_E 7O7Y_BG_B5,B8 0.54 0.76 1.46 0.39 L30e-like compare
3HAX_D_E 6AZ3_G_1,7 0.66 0.74 1.4 0.26 L30e-like compare
3HAX_D_E 7OZQ_A_H 0.89 0.86 0.25 0.38 L30e-like compare
3HAX_D_E 4BW0_B_A 0.89 0.91 0.43 0.56 L30e-like compare
3HAX_D_E 7O7Y_Al_A2 0.97 0.6 1.46 0.24 L30e-like compare