Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
View
Focus on
InterfaceRNA
Protein
All
Show chains
Interface
show interface as licoriceCommon contacts -
2HVY_D
|
2HVY_E
|
7O7Y_Al
|
7O7Y_A2
|
Conserved?
|
---|---|---|---|---|
D:39 [GLU] | E:33 [G] | Al:37 [GLU] | A2:1287 [G] | ✔ |
D:35 [LYS] | E:31 [A] | Al:33 [ARG] | A2:1285 [A] | ✔ |
D:35 [LYS] | E:33 [G] | Al:33 [ARG] | A2:1287 [G] | ✔ |
D:99 [SER] | E:32 [U] | Al:108 [CYS] | A2:1286 [G] | ✔ |
D:60 [PRO] | E:32 [U] | Al:58 [GLU] | A2:1286 [G] | ✔ |
D:59 [ASP] | E:32 [U] | Al:57 [ASP] | A2:1286 [G] | ✔ |
D:58 [VAL] | E:32 [U] | Al:56 [CYS] | A2:1286 [G] | ✔ |
D:97 [ALA] | E:31 [A] | Al:106 [CYS] | A2:1285 [A] | ✔ |
D:97 [ALA] | E:32 [U] | Al:106 [CYS] | A2:1286 [G] | ✔ |
D:98 [ALA] | E:31 [A] | Al:107 [SER] | A2:1285 [A] | ✔ |
D:98 [ALA] | E:32 [U] | Al:107 [SER] | A2:1286 [G] | ✔ |
D:96 [ALA] | E:31 [A] | Al:105 [GLY] | A2:1285 [A] | ✔ |
D:96 [ALA] | E:32 [U] | Al:105 [GLY] | A2:1286 [G] | ✔ |
D:84 [LYS] | E:32 [U] | Al:82 [ASN] | A2:1286 [G] | ✔ |
D:36 [GLY] | E:31 [A] | Al:34 [GLY] | A2:1285 [A] | ✔ |
D:36 [GLY] | E:32 [U] | Al:34 [GLY] | A2:1286 [G] | ✔ |
D:36 [GLY] | E:33 [G] | Al:34 [GLY] | A2:1287 [G] | ✔ |
D:95 [VAL] | E:30 [C] | Al:104 [VAL] | A2:1284 [C] | ✔ |
D:95 [VAL] | E:31 [A] | Al:104 [VAL] | A2:1285 [A] | ✔ |
D:38 [ASN] | E:33 [G] | Al:36 [ARG] | A2:1287 [G] | ✔ |
D:93 [ILE] | E:31 [A] | Al:91 [LEU] | A2:1285 [A] | ✔ |
D:57 [ASP] | E:32 [U] | Al:55 [ASN] | A2:1286 [G] | ✔ |
D:37 [THR] | E:31 [A] | Al:35 [ILE] | A2:1285 [A] | ✔ |
D:37 [THR] | E:32 [U] | Al:35 [ILE] | A2:1286 [G] | ✔ |
D:37 [THR] | E:33 [G] | Al:35 [ILE] | A2:1287 [G] | ✔ |
D:63 [ILE] | E:32 [U] | Al:61 [TYR] | A2:1286 [G] | ✔ |
D:39 [GLU] | E:31 [A] | Al:37 [GLU] | A2:1285 [A] | ❌ 7O7Y_Al_A2 |
D:99 [SER] | E:31 [A] | Al:108 [CYS] | A2:1285 [A] | ❌ 2HVY_D_E |
D:92 [GLY] | E:31 [A] | Al:90 [GLY] | A2:1285 [A] | ❌ 2HVY_D:92 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
L30e-like | 0.6 | 1.49 | 0.25 | 0.76 | 0.3 | 0.9 | 0.44 | 0.99 | 0.77 | 0.62 | 0.33 |
Other pairs involving 2HVY_D_E or 7O7Y_Al_A2
Total number of entries: 19