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All interfaces > All interologs > Interface groups > group139 > 3LWR_C_D vs 4BW0_B_A

Interface analysis


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Common contacts -

3LWR_C
3LWR_D
4BW0_B
4BW0_A
Conserved?
C:39 [GLU] D:24 [G] B:34 [GLU] A:5 [G] ✔
C:39 [GLU] D:29 [A] B:34 [GLU] A:18 [A] ✔
C:39 [GLU] D:31 [G] B:34 [GLU] A:20 [G] ✔
C:35 [LYS] D:25 [A] B:30 [LYS] A:6 [A] ✔
C:35 [LYS] D:29 [A] B:30 [LYS] A:18 [A] ✔
C:35 [LYS] D:31 [G] B:30 [LYS] A:20 [G] ✔
C:99 [SER] D:30 [U] B:94 [SER] A:19 [A] ✔
C:60 [PRO] D:30 [U] B:55 [PRO] A:19 [A] ✔
C:59 [ASP] D:30 [U] B:54 [ASP] A:19 [A] ✔
C:40 [THR] D:31 [G] B:35 [THR] A:20 [G] ✔
C:34 [ARG] D:24 [G] B:29 [LYS] A:5 [G] ✔
C:97 [ALA] D:29 [A] B:92 [CYS] A:18 [A] ✔
C:97 [ALA] D:30 [U] B:92 [CYS] A:19 [A] ✔
C:98 [ALA] D:29 [A] B:93 [ALA] A:18 [A] ✔
C:98 [ALA] D:30 [U] B:93 [ALA] A:19 [A] ✔
C:96 [ALA] D:29 [A] B:91 [PRO] A:18 [A] ✔
C:96 [ALA] D:30 [U] B:91 [PRO] A:19 [A] ✔
C:84 [LYS] D:30 [U] B:79 [LYS] A:19 [A] ✔
C:36 [GLY] D:29 [A] B:31 [GLY] A:18 [A] ✔
C:36 [GLY] D:30 [U] B:31 [GLY] A:19 [A] ✔
C:36 [GLY] D:31 [G] B:31 [GLY] A:20 [G] ✔
C:95 [VAL] D:28 [A] B:90 [VAL] A:17 [G] ✔
C:95 [VAL] D:29 [A] B:90 [VAL] A:18 [A] ✔
C:42 [LYS] D:22 [G] B:37 [LYS] A:3 [G] ✔
C:38 [ASN] D:24 [G] B:33 [ASN] A:5 [G] ✔
C:38 [ASN] D:30 [U] B:33 [ASN] A:19 [A] ✔
C:38 [ASN] D:31 [G] B:33 [ASN] A:20 [G] ✔
C:46 [ARG] D:22 [G] B:41 [ARG] A:3 [G] ✔
C:46 [ARG] D:23 [U] B:41 [ARG] A:4 [G] ✔
C:93 [ILE] D:29 [A] B:88 [ILE] A:18 [A] ✔
C:37 [THR] D:29 [A] B:32 [THR] A:18 [A] ✔
C:37 [THR] D:30 [U] B:32 [THR] A:19 [A] ✔
C:37 [THR] D:31 [G] B:32 [THR] A:20 [G] ✔
C:63 [ILE] D:30 [U] B:58 [ILE] A:19 [A] ✔
C:35 [LYS] D:24 [G] B:30 [LYS] A:5 [G] ❌ 4BW0_B_A
C:38 [ASN] D:22 [G] B:33 [ASN] A:3 [G] ❌ 4BW0_B_A
C:38 [ASN] D:23 [U] B:33 [ASN] A:4 [G] ❌ 3LWR_C_D
C:39 [GLU] D:25 [A] B:34 [GLU] A:6 [A] ❌ 3LWR_C_D
C:42 [LYS] D:23 [U] B:37 [LYS] A:4 [G] ❌ 3LWR_C_D
C:94 [GLU] D:28 [A] B:89 [GLU] A:17 [G] ❌ 3LWR_C_D
C:85 [LYS] D:27 [C] B:80 [ASN] A:16 [C] ❌ 4BW0_B:80, 4BW0_A:16 no longer at interface
C:94 [GLU] D:27 [C] B:89 [GLU] A:16 [C] ❌ 4BW0_A:16 no longer at interface
C:95 [VAL] D:27 [C] B:90 [VAL] A:16 [C] ❌ 4BW0_A:16 no longer at interface
C:42 [LYS] D:21 [G] B:37 [LYS] A:2 [G] ❌ 4BW0_A:2 no longer at interface
C:38 [ASN] D:21 [G] B:33 [ASN] A:2 [G] ❌ 4BW0_A:2 no longer at interface
C:94 [GLU] D:26 [U] B:89 [GLU] A:7 [G] ❌ 3LWR_D:26 no longer at interface
C:58 [VAL] D:30 [U] B:53 [VAL] A:19 [A] ❌ 4BW0_B:53 no longer at interface
C:57 [ASP] D:30 [U] B:52 [ASP] A:19 [A] ❌ 4BW0_B:52 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.89 0.54 0.56 0.96 0.17 1.0 0.89 0.78 0.75 0.50 0.57


Other pairs involving 3LWR_C_D or 4BW0_B_A

Total number of entries: 27

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 4BW0_B_A 0.89 0.94 0.48 0.44 L30e-like compare
1JJ2_F_0 3LWR_C_D 0.88 0.8 0.7 0.6 L30e-like compare
1VQ8_F_0 4BW0_B_A 0.88 0.94 0.47 0.44 L30e-like compare
1VQ8_F_0 3LWR_C_D 0.87 0.81 0.55 0.6 L30e-like compare
1YHQ_F_0 4BW0_B_A 0.88 0.94 0.45 0.44 L30e-like compare
1YHQ_F_0 3LWR_C_D 0.94 0.8 0.53 0.67 L30e-like compare
2HVY_D_E 4BW0_B_A 0.83 0.91 0.45 0.56 L30e-like compare
2HVY_D_E 3LWR_C_D 0.91 0.92 0.54 0.89 L30e-like compare
3HAX_D_E 3LWR_C_D 0.90 0.97 0.42 0.89 L30e-like compare
3HAX_D_E 4BW0_B_A 0.89 0.91 0.43 0.56 L30e-like compare
3LWR_C_D 6Q8U_C_A,B 0.79 0.83 0.49 0.56 L30e-like compare
3LWR_C_D 6AZ3_G_1,7 0.66 0.73 1.54 0.26 L30e-like compare
3LWR_C_D 7O7Y_Bc_B5 0.79 0.64 1.75 0.13 L30e-like compare
3LWR_C_D 7OZQ_A_H 0.78 0.84 0.32 0.38 L30e-like compare
3LWR_C_D 7O7Y_Al_A2 0.88 0.6 1.41 0.2 L30e-like compare
3LWR_C_D 4BW0_B_A 0.78 0.89 0.54 0.56 L30e-like compare
3LWR_C_D 5XTM_A_B 0.83 0.76 0.5 0.22 L30e-like compare
3LWR_C_D 6AZ3_d_3 0.69 0.6 1.53 0.17 L30e-like compare
3LWR_C_D 7O7Y_BG_B5,B8 0.53 0.74 1.47 0.35 L30e-like compare
4BW0_B_A 7OZQ_A_H 0.91 0.9 0.62 0.5 L30e-like compare
4BW0_B_A 5XTM_A_B 0.94 0.87 0.57 0.22 L30e-like compare
4BW0_B_A 7O7Y_Al_A2 0.85 0.75 1.35 0.22 L30e-like compare
4BW0_B_A 7O7Y_BG_B5,B8 0.56 0.87 1.17 0.3 L30e-like compare
4BW0_B_A 6AZ3_G_1,7 0.69 0.85 1.34 0.2 L30e-like compare
4BW0_B_A 7O7Y_Bc_B5 0.76 0.74 1.81 0.15 L30e-like compare
4BW0_B_A 6Q8U_C_A,B 0.99 0.95 0.45 1.0 L30e-like compare
4BW0_B_A 6AZ3_d_3 0.70 0.69 1.54 0.11 L30e-like compare