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All interfaces > All interologs > Interface groups > group139 > 3LWR_C_D vs 5XTM_A_B

Interface analysis


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Common contacts -

3LWR_C
3LWR_D
5XTM_A
5XTM_B
Conserved?
C:39 [GLU] D:29 [A] A:39 [GLU] B:18 [G] ✔
C:39 [GLU] D:31 [G] A:39 [GLU] B:20 [G] ✔
C:35 [LYS] D:29 [A] A:35 [LYS] B:18 [G] ✔
C:35 [LYS] D:31 [G] A:35 [LYS] B:20 [G] ✔
C:99 [SER] D:30 [U] A:99 [SER] B:19 [U] ✔
C:60 [PRO] D:30 [U] A:60 [PRO] B:19 [U] ✔
C:59 [ASP] D:30 [U] A:59 [ASP] B:19 [U] ✔
C:58 [VAL] D:30 [U] A:58 [VAL] B:19 [U] ✔
C:40 [THR] D:31 [G] A:40 [THR] B:20 [G] ✔
C:97 [ALA] D:29 [A] A:97 [ALA] B:18 [G] ✔
C:97 [ALA] D:30 [U] A:97 [ALA] B:19 [U] ✔
C:98 [ALA] D:29 [A] A:98 [ALA] B:18 [G] ✔
C:98 [ALA] D:30 [U] A:98 [ALA] B:19 [U] ✔
C:96 [ALA] D:29 [A] A:96 [ALA] B:18 [G] ✔
C:96 [ALA] D:30 [U] A:96 [ALA] B:19 [U] ✔
C:84 [LYS] D:30 [U] A:84 [LYS] B:19 [U] ✔
C:36 [GLY] D:29 [A] A:36 [GLY] B:18 [G] ✔
C:36 [GLY] D:30 [U] A:36 [GLY] B:19 [U] ✔
C:36 [GLY] D:31 [G] A:36 [GLY] B:20 [G] ✔
C:95 [VAL] D:28 [A] A:95 [VAL] B:17 [G] ✔
C:95 [VAL] D:29 [A] A:95 [VAL] B:18 [G] ✔
C:38 [ASN] D:31 [G] A:38 [ASN] B:20 [G] ✔
C:93 [ILE] D:29 [A] A:93 [ILE] B:18 [G] ✔
C:57 [ASP] D:30 [U] A:57 [ASP] B:19 [U] ✔
C:37 [THR] D:29 [A] A:37 [THR] B:18 [G] ✔
C:37 [THR] D:30 [U] A:37 [THR] B:19 [U] ✔
C:37 [THR] D:31 [G] A:37 [THR] B:20 [G] ✔
C:63 [ILE] D:30 [U] A:63 [ILE] B:19 [U] ✔
C:38 [ASN] D:30 [U] A:38 [ASN] B:19 [U] ❌ 5XTM_A_B
C:94 [GLU] D:28 [A] A:94 [GLU] B:17 [G] ❌ 3LWR_C_D
C:85 [LYS] D:27 [C] A:85 [LYS] B:16 [C] ❌ 5XTM_A:85, 5XTM_B:16 no longer at interface
C:94 [GLU] D:27 [C] A:94 [GLU] B:16 [C] ❌ 5XTM_B:16 no longer at interface
C:95 [VAL] D:27 [C] A:95 [VAL] B:16 [C] ❌ 5XTM_B:16 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.76 0.5 0.22 0.99 0.23 1.0 0.44 0.83 0.87 0.73 0.60


Other pairs involving 3LWR_C_D or 5XTM_A_B

Total number of entries: 26

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 3LWR_C_D 0.88 0.8 0.7 0.6 L30e-like compare
1YHQ_F_0 3LWR_C_D 0.94 0.8 0.53 0.67 L30e-like compare
1VQ8_F_0 3LWR_C_D 0.87 0.81 0.55 0.6 L30e-like compare
2HVY_D_E 3LWR_C_D 0.91 0.92 0.54 0.89 L30e-like compare
3HAX_D_E 3LWR_C_D 0.90 0.97 0.42 0.89 L30e-like compare
3LWR_C_D 4BW0_B_A 0.78 0.89 0.54 0.56 L30e-like compare
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare
3LWR_C_D 5XTM_A_B 0.83 0.76 0.5 0.22 L30e-like compare
1YHQ_F_0 5XTM_A_B 0.93 0.78 0.72 0.22 L30e-like compare
4BW0_B_A 5XTM_A_B 0.94 0.87 0.57 0.22 L30e-like compare
1VQ8_F_0 5XTM_A_B 0.75 0.75 1.28 0.33 L30e-like compare
2HVY_D_E 5XTM_A_B 0.92 0.78 0.22 0.22 L30e-like compare
5XTM_A_B 6AZ3_G_1,7 0.91 0.7 1.59 0.27 L30e-like compare
3LWR_C_D 6AZ3_G_1,7 0.66 0.73 1.54 0.26 L30e-like compare
5XTM_A_B 6AZ3_d_3 0.80 0.58 1.46 0.17 L30e-like compare
3LWR_C_D 6AZ3_d_3 0.69 0.6 1.53 0.17 L30e-like compare
5XTM_A_B 6Q8U_C_A,B 0.95 0.79 0.59 0.22 L30e-like compare
3LWR_C_D 6Q8U_C_A,B 0.79 0.83 0.49 0.56 L30e-like compare
5XTM_A_B 7O7Y_Al_A2 0.77 0.73 1.67 0.24 L30e-like compare
3LWR_C_D 7O7Y_Al_A2 0.88 0.6 1.41 0.2 L30e-like compare
5XTM_A_B 7O7Y_BG_B5,B8 0.68 0.71 1.4 0.22 L30e-like compare
3LWR_C_D 7O7Y_BG_B5,B8 0.53 0.74 1.47 0.35 L30e-like compare
5XTM_A_B 7O7Y_Bc_B5 0.79 0.62 1.62 0.14 L30e-like compare
3LWR_C_D 7O7Y_Bc_B5 0.79 0.64 1.75 0.13 L30e-like compare
5XTM_A_B 7OZQ_A_H 1.00 0.85 0.21 0.38 L30e-like compare
3LWR_C_D 7OZQ_A_H 0.78 0.84 0.32 0.38 L30e-like compare