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All interfaces > All interologs > Interface groups > group139 > 3LWR_C_D vs 6AZ3_G_1,7

Interface analysis


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Common contacts -

3LWR_C
3LWR_D
6AZ3_G
6AZ3_1,7
Conserved?
C:39 [GLU] D:24 [G] G:223 [GLU] 1:120 [G] ✔
C:39 [GLU] D:29 [A] G:223 [GLU] 1:145 [U] ✔
C:39 [GLU] D:31 [G] G:223 [GLU] 1:147 [G] ✔
C:35 [LYS] D:29 [A] G:219 [THR] 1:145 [U] ✔
C:35 [LYS] D:31 [G] G:219 [THR] 1:147 [G] ✔
C:99 [SER] D:30 [U] G:282 [CYS] 1:146 [U] ✔
C:60 [PRO] D:30 [U] G:244 [PRO] 1:146 [U] ✔
C:59 [ASP] D:30 [U] G:243 [ASP] 1:146 [U] ✔
C:58 [VAL] D:30 [U] G:242 [VAL] 1:146 [U] ✔
C:97 [ALA] D:30 [U] G:280 [ALA] 1:146 [U] ✔
C:98 [ALA] D:30 [U] G:281 [THR] 1:146 [U] ✔
C:96 [ALA] D:29 [A] G:279 [THR] 1:145 [U] ✔
C:96 [ALA] D:30 [U] G:279 [THR] 1:146 [U] ✔
C:84 [LYS] D:30 [U] G:268 [MET] 1:146 [U] ✔
C:36 [GLY] D:29 [A] G:220 [GLY] 1:145 [U] ✔
C:36 [GLY] D:30 [U] G:220 [GLY] 1:146 [U] ✔
C:36 [GLY] D:31 [G] G:220 [GLY] 1:147 [G] ✔
C:95 [VAL] D:28 [A] G:278 [LYS] 1:144 [G] ✔
C:42 [LYS] D:22 [G] G:226 [ARG] 1:118 [C] ✔
C:38 [ASN] D:24 [G] G:222 [GLN] 1:120 [G] ✔
C:38 [ASN] D:31 [G] G:222 [GLN] 1:147 [G] ✔
C:46 [ARG] D:22 [G] G:230 [LYS] 1:118 [C] ✔
C:46 [ARG] D:23 [U] G:230 [LYS] 1:119 [C] ✔
C:57 [ASP] D:30 [U] G:241 [ASN] 1:146 [U] ✔
C:37 [THR] D:29 [A] G:221 [LEU] 1:145 [U] ✔
C:37 [THR] D:30 [U] G:221 [LEU] 1:146 [U] ✔
C:37 [THR] D:31 [G] G:221 [LEU] 1:147 [G] ✔
C:63 [ILE] D:30 [U] G:247 [LEU] 1:146 [U] ✔
C:85 [LYS] D:27 [C] G:269 [ALA] 1:142 [G] ❌ 6AZ3_G_1,7
C:35 [LYS] D:24 [G] G:219 [THR] 1:120 [G] ❌ 6AZ3_G_1,7
C:35 [LYS] D:25 [A] G:219 [THR] 1:121 [A] ❌ 6AZ3_G_1,7
C:94 [GLU] D:27 [C] G:277 [ARG] 1:142 [G] ❌ 6AZ3_G_1,7
C:97 [ALA] D:29 [A] G:280 [ALA] 1:145 [U] ❌ 6AZ3_G_1,7
C:98 [ALA] D:29 [A] G:281 [THR] 1:145 [U] ❌ 6AZ3_G_1,7
C:95 [VAL] D:27 [C] G:278 [LYS] 1:142 [G] ❌ 6AZ3_G_1,7
C:95 [VAL] D:29 [A] G:278 [LYS] 1:145 [U] ❌ 6AZ3_G_1,7
C:38 [ASN] D:22 [G] G:222 [GLN] 1:118 [C] ❌ 6AZ3_G_1,7
C:38 [ASN] D:30 [U] G:222 [GLN] 1:146 [U] ❌ 6AZ3_G_1,7
C:38 [ASN] D:23 [U] G:222 [GLN] 1:119 [C] ❌ 3LWR_C_D
C:42 [LYS] D:23 [U] G:226 [ARG] 1:119 [C] ❌ 3LWR_C_D
C:42 [LYS] D:24 [G] G:226 [ARG] 1:120 [G] ❌ 3LWR_C_D
C:94 [GLU] D:29 [A] G:277 [ARG] 1:145 [U] ❌ 3LWR_C_D
C:42 [LYS] D:21 [G] G:226 [ARG] 1:116 [U] ❌ 6AZ3_1:116 no longer at interface
C:38 [ASN] D:21 [G] G:222 [GLN] 1:116 [U] ❌ 6AZ3_1:116 no longer at interface
C:38 [ASN] D:20 [C] G:222 [GLN] 1:115 [U] ❌ 3LWR_D:20 no longer at interface
C:40 [THR] D:31 [G] G:224 [VAL] 1:147 [G] ❌ 6AZ3_G:224 no longer at interface
C:34 [ARG] D:24 [G] G:218 [VAL] 1:120 [G] ❌ 6AZ3_G:218 no longer at interface
C:93 [ILE] D:29 [A] G:276 [GLY] 1:145 [U] ❌ 6AZ3_G:276 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.73 1.54 0.26 0.85 0.3 0.87 0.9 0.66 0.55 0.39 0.30


Other pairs involving 3LWR_C_D or 6AZ3_G_1,7

Total number of entries: 24

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 3LWR_C_D 0.88 0.8 0.7 0.6 L30e-like compare
1JJ2_F_0 6AZ3_G_1,7 0.72 0.68 2.27 0.19 L30e-like compare
5XTM_A_B 6AZ3_G_1,7 0.91 0.7 1.59 0.27 L30e-like compare
3LWR_C_D 6Q8U_C_A,B 0.79 0.83 0.49 0.56 L30e-like compare
3LWR_C_D 6AZ3_G_1,7 0.66 0.73 1.54 0.26 L30e-like compare
3LWR_C_D 7O7Y_Bc_B5 0.79 0.64 1.75 0.13 L30e-like compare
3LWR_C_D 7OZQ_A_H 0.78 0.84 0.32 0.38 L30e-like compare
3LWR_C_D 7O7Y_Al_A2 0.88 0.6 1.41 0.2 L30e-like compare
3LWR_C_D 4BW0_B_A 0.78 0.89 0.54 0.56 L30e-like compare
3LWR_C_D 5XTM_A_B 0.83 0.76 0.5 0.22 L30e-like compare
3LWR_C_D 6AZ3_d_3 0.69 0.6 1.53 0.17 L30e-like compare
3LWR_C_D 7O7Y_BG_B5,B8 0.53 0.74 1.47 0.35 L30e-like compare
1YHQ_F_0 6AZ3_G_1,7 0.71 0.68 2.26 0.19 L30e-like compare
1YHQ_F_0 3LWR_C_D 0.94 0.8 0.53 0.67 L30e-like compare
4BW0_B_A 6AZ3_G_1,7 0.69 0.85 1.34 0.2 L30e-like compare
1VQ8_F_0 6AZ3_G_1,7 0.70 0.68 2.29 0.19 L30e-like compare
1VQ8_F_0 3LWR_C_D 0.87 0.81 0.55 0.6 L30e-like compare
2HVY_D_E 6AZ3_G_1,7 0.69 0.72 1.31 0.3 L30e-like compare
2HVY_D_E 3LWR_C_D 0.91 0.92 0.54 0.89 L30e-like compare
3HAX_D_E 3LWR_C_D 0.90 0.97 0.42 0.89 L30e-like compare
3HAX_D_E 6AZ3_G_1,7 0.66 0.74 1.4 0.26 L30e-like compare
6AZ3_G_1,7 6Q8U_C_A,B 0.83 0.77 1.38 0.2 L30e-like compare
6AZ3_G_1,7 7OZQ_A_H 0.68 0.8 1.4 0.27 L30e-like compare
6AZ3_G_1,7 7O7Y_BG_B5,B8 0.69 0.93 1.08 0.38 L30e-like 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare