Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
4BW0_B
|
4BW0_A
|
7O7Y_Al
|
7O7Y_A2
|
Conserved?
|
---|---|---|---|---|
B:88 [ILE] | A:18 [A] | Al:91 [LEU] | A2:1285 [A] | ✔ |
B:55 [PRO] | A:19 [A] | Al:58 [GLU] | A2:1286 [G] | ✔ |
B:91 [PRO] | A:18 [A] | Al:105 [GLY] | A2:1285 [A] | ✔ |
B:91 [PRO] | A:19 [A] | Al:105 [GLY] | A2:1286 [G] | ✔ |
B:79 [LYS] | A:19 [A] | Al:82 [ASN] | A2:1286 [G] | ✔ |
B:34 [GLU] | A:20 [G] | Al:37 [GLU] | A2:1287 [G] | ✔ |
B:94 [SER] | A:19 [A] | Al:108 [CYS] | A2:1286 [G] | ✔ |
B:32 [THR] | A:18 [A] | Al:35 [ILE] | A2:1285 [A] | ✔ |
B:32 [THR] | A:19 [A] | Al:35 [ILE] | A2:1286 [G] | ✔ |
B:32 [THR] | A:20 [G] | Al:35 [ILE] | A2:1287 [G] | ✔ |
B:58 [ILE] | A:19 [A] | Al:61 [TYR] | A2:1286 [G] | ✔ |
B:31 [GLY] | A:18 [A] | Al:34 [GLY] | A2:1285 [A] | ✔ |
B:31 [GLY] | A:19 [A] | Al:34 [GLY] | A2:1286 [G] | ✔ |
B:31 [GLY] | A:20 [G] | Al:34 [GLY] | A2:1287 [G] | ✔ |
B:30 [LYS] | A:18 [A] | Al:33 [ARG] | A2:1285 [A] | ✔ |
B:30 [LYS] | A:20 [G] | Al:33 [ARG] | A2:1287 [G] | ✔ |
B:92 [CYS] | A:18 [A] | Al:106 [CYS] | A2:1285 [A] | ✔ |
B:92 [CYS] | A:19 [A] | Al:106 [CYS] | A2:1286 [G] | ✔ |
B:33 [ASN] | A:20 [G] | Al:36 [ARG] | A2:1287 [G] | ✔ |
B:93 [ALA] | A:18 [A] | Al:107 [SER] | A2:1285 [A] | ✔ |
B:93 [ALA] | A:19 [A] | Al:107 [SER] | A2:1286 [G] | ✔ |
B:90 [VAL] | A:17 [G] | Al:104 [VAL] | A2:1284 [C] | ✔ |
B:90 [VAL] | A:18 [A] | Al:104 [VAL] | A2:1285 [A] | ✔ |
B:54 [ASP] | A:19 [A] | Al:57 [ASP] | A2:1286 [G] | ✔ |
B:34 [GLU] | A:18 [A] | Al:37 [GLU] | A2:1285 [A] | ❌ 7O7Y_Al_A2 |
B:33 [ASN] | A:19 [A] | Al:36 [ARG] | A2:1286 [G] | ❌ 7O7Y_Al_A2 |
B:94 [SER] | A:18 [A] | Al:108 [CYS] | A2:1285 [A] | ❌ 4BW0_B_A |
B:89 [GLU] | A:17 [G] | Al:92 [CYS] | A2:1284 [C] | ❌ 7O7Y_Al:92 no longer at interface |
B:35 [THR] | A:20 [G] | Al:38 [ALA] | A2:1287 [G] | ❌ 7O7Y_Al:38 no longer at interface |
B:52 [ASP] | A:19 [A] | Al:55 [ASN] | A2:1286 [G] | ❌ 4BW0_B:52 no longer at interface |
B:53 [VAL] | A:19 [A] | Al:56 [CYS] | A2:1286 [G] | ❌ 4BW0_B:53 no longer at interface |
B:87 [GLY] | A:18 [A] | Al:90 [GLY] | A2:1285 [A] | ❌ 4BW0_B:87 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
L30e-like | 0.75 | 1.35 | 0.22 | 0.79 | 0.23 | 0.8 | 0.44 | 0.85 | 0.70 | 0.44 | 0.62 |
Other pairs involving 4BW0_B_A or 7O7Y_Al_A2
Total number of entries: 19