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All interfaces > All interologs > Interface groups > group139 > 5XTM_A_B vs 6Q8U_C_A,B

Interface analysis


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Common contacts -

5XTM_A
5XTM_B
6Q8U_C
6Q8U_A,B
Conserved?
A:39 [GLU] B:18 [G] C:34 [GLU] B:27 [A] ✔
A:39 [GLU] B:20 [G] C:34 [GLU] B:29 [G] ✔
A:35 [LYS] B:18 [G] C:30 [LYS] B:27 [A] ✔
A:35 [LYS] B:20 [G] C:30 [LYS] B:29 [G] ✔
A:99 [SER] B:19 [U] C:94 [SER] B:28 [A] ✔
A:60 [PRO] B:19 [U] C:55 [PRO] B:28 [A] ✔
A:94 [GLU] B:17 [G] C:89 [GLU] B:26 [G] ✔
A:59 [ASP] B:19 [U] C:54 [ASP] B:28 [A] ✔
A:40 [THR] B:20 [G] C:35 [THR] B:29 [G] ✔
A:97 [ALA] B:18 [G] C:92 [CYS] B:27 [A] ✔
A:97 [ALA] B:19 [U] C:92 [CYS] B:28 [A] ✔
A:98 [ALA] B:18 [G] C:93 [ALA] B:27 [A] ✔
A:98 [ALA] B:19 [U] C:93 [ALA] B:28 [A] ✔
A:96 [ALA] B:18 [G] C:91 [PRO] B:27 [A] ✔
A:96 [ALA] B:19 [U] C:91 [PRO] B:28 [A] ✔
A:84 [LYS] B:19 [U] C:79 [LYS] B:28 [A] ✔
A:36 [GLY] B:18 [G] C:31 [GLY] B:27 [A] ✔
A:36 [GLY] B:19 [U] C:31 [GLY] B:28 [A] ✔
A:36 [GLY] B:20 [G] C:31 [GLY] B:29 [G] ✔
A:95 [VAL] B:17 [G] C:90 [VAL] B:26 [G] ✔
A:95 [VAL] B:18 [G] C:90 [VAL] B:27 [A] ✔
A:38 [ASN] B:20 [G] C:33 [ASN] B:29 [G] ✔
A:93 [ILE] B:18 [G] C:88 [ILE] B:27 [A] ✔
A:37 [THR] B:18 [G] C:32 [THR] B:27 [A] ✔
A:37 [THR] B:19 [U] C:32 [THR] B:28 [A] ✔
A:37 [THR] B:20 [G] C:32 [THR] B:29 [G] ✔
A:63 [ILE] B:19 [U] C:58 [ILE] B:28 [A] ✔
A:38 [ASN] B:19 [U] C:33 [ASN] B:28 [A] ❌ 5XTM_A_B
A:58 [VAL] B:19 [U] C:53 [VAL] B:28 [A] ❌ 6Q8U_C:53 no longer at interface
A:57 [ASP] B:19 [U] C:52 [ASP] B:28 [A] ❌ 6Q8U_C:52 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.79 0.59 0.22 0.95 0.3 1.0 0.44 0.95 0.88 1.00 0.67


Other pairs involving 5XTM_A_B or 6Q8U_C_A,B

Total number of entries: 26

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare
1JJ2_F_0 6Q8U_C_A,B 0.89 0.85 0.61 0.44 L30e-like compare
5XTM_A_B 6AZ3_d_3 0.80 0.58 1.46 0.17 L30e-like compare
5XTM_A_B 6Q8U_C_A,B 0.95 0.79 0.59 0.22 L30e-like compare
5XTM_A_B 7O7Y_Al_A2 0.77 0.73 1.67 0.24 L30e-like compare
5XTM_A_B 6AZ3_G_1,7 0.91 0.7 1.59 0.27 L30e-like compare
5XTM_A_B 7O7Y_BG_B5,B8 0.68 0.71 1.4 0.22 L30e-like compare
5XTM_A_B 7O7Y_Bc_B5 0.79 0.62 1.62 0.14 L30e-like compare
5XTM_A_B 7OZQ_A_H 1.00 0.85 0.21 0.38 L30e-like compare
3LWR_C_D 6Q8U_C_A,B 0.79 0.83 0.49 0.56 L30e-like compare
3LWR_C_D 5XTM_A_B 0.83 0.76 0.5 0.22 L30e-like compare
6AZ3_d_3 6Q8U_C_A,B 0.71 0.68 1.69 0.17 L30e-like compare
1YHQ_F_0 6Q8U_C_A,B 0.88 0.85 0.58 0.44 L30e-like compare
1YHQ_F_0 5XTM_A_B 0.93 0.78 0.72 0.22 L30e-like compare
6Q8U_C_A,B 7O7Y_Al_A2 0.87 0.66 1.35 0.22 L30e-like compare
6Q8U_C_A,B 7O7Y_BG_B5,B8 0.60 0.8 1.18 0.3 L30e-like compare
6Q8U_C_A,B 7OZQ_A_H 0.92 0.87 0.5 0.5 L30e-like compare
6Q8U_C_A,B 7O7Y_Bc_B5 0.78 0.71 1.79 0.15 L30e-like compare
4BW0_B_A 5XTM_A_B 0.94 0.87 0.57 0.22 L30e-like compare
4BW0_B_A 6Q8U_C_A,B 0.99 0.95 0.45 1.0 L30e-like compare
1VQ8_F_0 5XTM_A_B 0.75 0.75 1.28 0.33 L30e-like compare
1VQ8_F_0 6Q8U_C_A,B 0.91 0.85 0.69 0.44 L30e-like compare
2HVY_D_E 5XTM_A_B 0.92 0.78 0.22 0.22 L30e-like compare
2HVY_D_E 6Q8U_C_A,B 0.84 0.84 0.4 0.56 L30e-like compare
3HAX_D_E 6Q8U_C_A,B 0.89 0.84 0.42 0.56 L30e-like compare
6AZ3_G_1,7 6Q8U_C_A,B 0.83 0.77 1.38 0.2 L30e-like compare