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All interfaces > All interologs > Interface groups > group139 > 5XTM_A_B vs 7O7Y_Bc_B5

Interface analysis


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Common contacts -

5XTM_A
5XTM_B
7O7Y_Bc
7O7Y_B5
Conserved?
A:39 [GLU] B:18 [G] Bc:33 [GLN] B5:2516 [G] ✔
A:39 [GLU] B:20 [G] Bc:33 [GLN] B5:2518 [G] ✔
A:35 [LYS] B:18 [G] Bc:29 [LEU] B5:2516 [G] ✔
A:35 [LYS] B:20 [G] Bc:29 [LEU] B5:2518 [G] ✔
A:99 [SER] B:19 [U] Bc:93 [THR] B5:2517 [A] ✔
A:60 [PRO] B:19 [U] Bc:53 [PRO] B5:2517 [A] ✔
A:58 [VAL] B:19 [U] Bc:52 [CYS] B5:2517 [A] ✔
A:40 [THR] B:20 [G] Bc:34 [SER] B5:2518 [G] ✔
A:97 [ALA] B:18 [G] Bc:91 [VAL] B5:2516 [G] ✔
A:97 [ALA] B:19 [U] Bc:91 [VAL] B5:2517 [A] ✔
A:98 [ALA] B:18 [G] Bc:92 [CYS] B5:2516 [G] ✔
A:98 [ALA] B:19 [U] Bc:92 [CYS] B5:2517 [A] ✔
A:96 [ALA] B:18 [G] Bc:90 [ARG] B5:2516 [G] ✔
A:96 [ALA] B:19 [U] Bc:90 [ARG] B5:2517 [A] ✔
A:36 [GLY] B:18 [G] Bc:30 [GLY] B5:2516 [G] ✔
A:36 [GLY] B:19 [U] Bc:30 [GLY] B5:2517 [A] ✔
A:36 [GLY] B:20 [G] Bc:30 [GLY] B5:2518 [G] ✔
A:95 [VAL] B:18 [G] Bc:89 [TYR] B5:2516 [G] ✔
A:38 [ASN] B:20 [G] Bc:32 [LYS] B5:2518 [G] ✔
A:57 [ASP] B:19 [U] Bc:51 [ASN] B5:2517 [A] ✔
A:37 [THR] B:18 [G] Bc:31 [TYR] B5:2516 [G] ✔
A:37 [THR] B:19 [U] Bc:31 [TYR] B5:2517 [A] ✔
A:37 [THR] B:20 [G] Bc:31 [TYR] B5:2518 [G] ✔
A:63 [ILE] B:19 [U] Bc:56 [ARG] B5:2517 [A] ✔
A:94 [GLU] B:17 [G] Bc:88 [TYR] B5:2515 [C] ❌ 7O7Y_Bc_B5
A:95 [VAL] B:17 [G] Bc:89 [TYR] B5:2515 [C] ❌ 7O7Y_Bc_B5
A:96 [ALA] B:17 [G] Bc:90 [ARG] B5:2515 [C] ❌ 5XTM_A_B
A:84 [LYS] B:19 [U] Bc:77 [ASN] B5:2517 [A] ❌ 7O7Y_Bc:77 no longer at interface
A:93 [ILE] B:18 [G] Bc:87 [LYS] B5:2516 [G] ❌ 7O7Y_Bc:87 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.62 1.62 0.14 0.81 0.26 0.77 0.44 0.79 0.60 0.55 0.40


Other pairs involving 5XTM_A_B or 7O7Y_Bc_B5

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare
5XTM_A_B 6AZ3_d_3 0.80 0.58 1.46 0.17 L30e-like compare
5XTM_A_B 6Q8U_C_A,B 0.95 0.79 0.59 0.22 L30e-like compare
5XTM_A_B 7O7Y_Al_A2 0.77 0.73 1.67 0.24 L30e-like compare
5XTM_A_B 6AZ3_G_1,7 0.91 0.7 1.59 0.27 L30e-like compare
5XTM_A_B 7O7Y_BG_B5,B8 0.68 0.71 1.4 0.22 L30e-like compare
5XTM_A_B 7O7Y_Bc_B5 0.79 0.62 1.62 0.14 L30e-like compare
5XTM_A_B 7OZQ_A_H 1.00 0.85 0.21 0.38 L30e-like compare
3LWR_C_D 7O7Y_Bc_B5 0.79 0.64 1.75 0.13 L30e-like compare
3LWR_C_D 5XTM_A_B 0.83 0.76 0.5 0.22 L30e-like compare
6AZ3_d_3 7O7Y_Bc_B5 0.92 0.92 0.7 0.5 L30e-like compare
1YHQ_F_0 5XTM_A_B 0.93 0.78 0.72 0.22 L30e-like compare
6Q8U_C_A,B 7O7Y_Bc_B5 0.78 0.71 1.79 0.15 L30e-like compare
4BW0_B_A 5XTM_A_B 0.94 0.87 0.57 0.22 L30e-like compare
4BW0_B_A 7O7Y_Bc_B5 0.76 0.74 1.81 0.15 L30e-like compare
1VQ8_F_0 5XTM_A_B 0.75 0.75 1.28 0.33 L30e-like compare
2HVY_D_E 5XTM_A_B 0.92 0.78 0.22 0.22 L30e-like compare
2HVY_D_E 7O7Y_Bc_B5 0.79 0.65 1.7 0.15 L30e-like compare
3HAX_D_E 7O7Y_Bc_B5 0.76 0.63 1.73 0.13 L30e-like compare
7O7Y_Bc_B5 7OZQ_A_H 0.74 0.68 1.59 0.12 L30e-like compare