Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
6AZ3_G
|
6AZ3_1,7
|
7OZQ_A
|
7OZQ_H
|
Conserved?
|
---|---|---|---|---|
G:247 [LEU] | 1:146 [U] | A:62 [ILE] | H:29 [U] | ✔ |
G:241 [ASN] | 1:146 [U] | A:56 [ASP] | H:29 [U] | ✔ |
G:280 [ALA] | 1:146 [U] | A:96 [ALA] | H:29 [U] | ✔ |
G:220 [GLY] | 1:145 [U] | A:35 [GLY] | H:28 [A] | ✔ |
G:220 [GLY] | 1:146 [U] | A:35 [GLY] | H:29 [U] | ✔ |
G:220 [GLY] | 1:147 [G] | A:35 [GLY] | H:30 [G] | ✔ |
G:268 [MET] | 1:146 [U] | A:83 [LYS] | H:29 [U] | ✔ |
G:282 [CYS] | 1:146 [U] | A:98 [SER] | H:29 [U] | ✔ |
G:222 [GLN] | 1:147 [G] | A:37 [ASN] | H:30 [G] | ✔ |
G:230 [LYS] | 1:118 [C] | A:45 [ARG] | H:3 [A] | ✔ |
G:230 [LYS] | 1:119 [C] | A:45 [ARG] | H:4 [C] | ✔ |
G:279 [THR] | 1:145 [U] | A:95 [ALA] | H:28 [A] | ✔ |
G:279 [THR] | 1:146 [U] | A:95 [ALA] | H:29 [U] | ✔ |
G:278 [LYS] | 1:144 [G] | A:94 [VAL] | H:27 [G] | ✔ |
G:219 [THR] | 1:145 [U] | A:34 [LYS] | H:28 [A] | ✔ |
G:219 [THR] | 1:147 [G] | A:34 [LYS] | H:30 [G] | ✔ |
G:242 [VAL] | 1:146 [U] | A:57 [VAL] | H:29 [U] | ✔ |
G:223 [GLU] | 1:120 [G] | A:38 [GLU] | H:5 [U] | ✔ |
G:223 [GLU] | 1:145 [U] | A:38 [GLU] | H:28 [A] | ✔ |
G:223 [GLU] | 1:147 [G] | A:38 [GLU] | H:30 [G] | ✔ |
G:226 [ARG] | 1:118 [C] | A:41 [LYS] | H:3 [A] | ✔ |
G:226 [ARG] | 1:119 [C] | A:41 [LYS] | H:4 [C] | ✔ |
G:244 [PRO] | 1:146 [U] | A:59 [PRO] | H:29 [U] | ✔ |
G:243 [ASP] | 1:146 [U] | A:58 [ASP] | H:29 [U] | ✔ |
G:281 [THR] | 1:146 [U] | A:97 [ALA] | H:29 [U] | ✔ |
G:221 [LEU] | 1:145 [U] | A:36 [THR] | H:28 [A] | ✔ |
G:221 [LEU] | 1:146 [U] | A:36 [THR] | H:29 [U] | ✔ |
G:221 [LEU] | 1:147 [G] | A:36 [THR] | H:30 [G] | ✔ |
G:277 [ARG] | 1:145 [U] | A:93 [GLU] | H:28 [A] | ❌ 7OZQ_A_H |
G:222 [GLN] | 1:119 [C] | A:37 [ASN] | H:4 [C] | ❌ 7OZQ_A_H |
G:222 [GLN] | 1:120 [G] | A:37 [ASN] | H:5 [U] | ❌ 7OZQ_A_H |
G:226 [ARG] | 1:120 [G] | A:41 [LYS] | H:5 [U] | ❌ 7OZQ_A_H |
G:222 [GLN] | 1:146 [U] | A:37 [ASN] | H:29 [U] | ❌ 6AZ3_G_1,7 |
G:277 [ARG] | 1:123 [U] | A:93 [GLU] | H:7 [G] | ❌ 6AZ3_G_1,7 |
G:277 [ARG] | 1:144 [G] | A:93 [GLU] | H:27 [G] | ❌ 6AZ3_G_1,7 |
G:278 [LYS] | 1:145 [U] | A:94 [VAL] | H:28 [A] | ❌ 6AZ3_G_1,7 |
G:280 [ALA] | 1:145 [U] | A:96 [ALA] | H:28 [A] | ❌ 6AZ3_G_1,7 |
G:281 [THR] | 1:145 [U] | A:97 [ALA] | H:28 [A] | ❌ 6AZ3_G_1,7 |
G:222 [GLN] | 1:115 [U] | A:37 [ASN] | H:1 [G] | ❌ 7OZQ_H:1 no longer at interface |
G:278 [LYS] | 1:143 [A] | A:94 [VAL] | H:26 [U] | ❌ 7OZQ_H:26 no longer at interface |
G:218 [VAL] | 1:119 [C] | A:33 [ARG] | H:4 [C] | ❌ 6AZ3_G:218 no longer at interface |
G:218 [VAL] | 1:120 [G] | A:33 [ARG] | H:5 [U] | ❌ 6AZ3_G:218 no longer at interface |
G:224 [VAL] | 1:147 [G] | A:39 [THR] | H:30 [G] | ❌ 6AZ3_G:224 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
L30e-like | 0.8 | 1.4 | 0.27 | 0.84 | 0.34 | 0.86 | 1.0 | 0.68 | 0.49 | 0.31 | 0.33 |
Other pairs involving 6AZ3_G_1,7 or 7OZQ_A_H
Total number of entries: 23