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All interfaces > All interologs > Interface groups > group139 > 6Q8U_C_A,B vs 7O7Y_BG_B5,B8

Interface analysis


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Common contacts -

6Q8U_C
6Q8U_A,B
7O7Y_BG
7O7Y_B5,B8
Conserved?
C:55 [PRO] B:28 [A] BG:163 [PRO] B5:150 [U] ✔
C:41 [ARG] A:15 [G] BG:149 [ASN] B5:117 [C] ✔
C:37 [LYS] A:14 [G] BG:145 [THR] B5:116 [G] ✔
C:37 [LYS] A:15 [G] BG:145 [THR] B5:117 [C] ✔
C:91 [PRO] B:27 [A] BG:198 [THR] B5:149 [A] ✔
C:91 [PRO] B:28 [A] BG:198 [THR] B5:150 [U] ✔
C:89 [GLU] B:26 [G] BG:196 [ARG] B5:148 [A] ✔
C:79 [LYS] B:28 [A] BG:187 [LYS] B5:150 [U] ✔
C:34 [GLU] B:29 [G] BG:142 [THR] B5:151 [G] ✔
C:94 [SER] B:28 [A] BG:201 [THR] B5:150 [U] ✔
C:32 [THR] B:27 [A] BG:140 [VAL] B5:149 [A] ✔
C:32 [THR] B:28 [A] BG:140 [VAL] B5:150 [U] ✔
C:32 [THR] B:29 [G] BG:140 [VAL] B5:151 [G] ✔
C:58 [ILE] B:28 [A] BG:166 [LEU] B5:150 [U] ✔
C:35 [THR] B:29 [G] BG:143 [VAL] B5:151 [G] ✔
C:31 [GLY] B:27 [A] BG:139 [GLY] B5:149 [A] ✔
C:31 [GLY] B:28 [A] BG:139 [GLY] B5:150 [U] ✔
C:31 [GLY] B:29 [G] BG:139 [GLY] B5:151 [G] ✔
C:30 [LYS] B:27 [A] BG:138 [ALA] B5:149 [A] ✔
C:30 [LYS] B:29 [G] BG:138 [ALA] B5:151 [G] ✔
C:92 [CYS] B:27 [A] BG:199 [CYS] B5:149 [A] ✔
C:92 [CYS] B:28 [A] BG:199 [CYS] B5:150 [U] ✔
C:33 [ASN] B:28 [A] BG:141 [ASN] B5:150 [U] ✔
C:33 [ASN] B:29 [G] BG:141 [ASN] B5:151 [G] ✔
C:93 [ALA] B:27 [A] BG:200 [THR] B5:149 [A] ✔
C:93 [ALA] B:28 [A] BG:200 [THR] B5:150 [U] ✔
C:90 [VAL] B:26 [G] BG:197 [LYS] B5:148 [A] ✔
C:54 [ASP] B:28 [A] BG:162 [ASP] B5:150 [U] ✔
C:88 [ILE] B:27 [A] BG:195 [HIS] B5:149 [A] ❌ 7O7Y_BG_B5,B8
C:41 [ARG] A:14 [G] BG:149 [ASN] B5:116 [G] ❌ 7O7Y_BG_B5,B8
C:37 [LYS] A:16 [G] BG:145 [THR] B5:119 [G] ❌ 7O7Y_BG_B5,B8
C:34 [GLU] A:16 [G] BG:142 [THR] B5:119 [G] ❌ 7O7Y_BG_B5,B8
C:34 [GLU] B:27 [A] BG:142 [THR] B5:149 [A] ❌ 7O7Y_BG_B5,B8
C:30 [LYS] A:16 [G] BG:138 [ALA] B5:119 [G] ❌ 7O7Y_BG_B5,B8
C:30 [LYS] A:17 [A] BG:138 [ALA] B5:120 [A] ❌ 7O7Y_BG_B5,B8
C:33 [ASN] A:15 [G] BG:141 [ASN] B5:117 [C] ❌ 7O7Y_BG_B5,B8
C:33 [ASN] A:16 [G] BG:141 [ASN] B5:119 [G] ❌ 7O7Y_BG_B5,B8
C:90 [VAL] B:27 [A] BG:197 [LYS] B5:149 [A] ❌ 7O7Y_BG_B5,B8
C:29 [LYS] A:16 [G] BG:137 [ARG] B5:119 [G] ❌ 7O7Y_BG_B5,B8
C:88 [ILE] B:26 [G] BG:195 [HIS] B5:148 [A] ❌ 6Q8U_C_A,B
C:89 [GLU] B:27 [A] BG:196 [ARG] B5:149 [A] ❌ 6Q8U_C_A,B
C:89 [GLU] A:18 [G] BG:196 [ARG] B5:122 [U] ❌ 7O7Y_B5:122 no longer at interface
C:33 [ASN] A:13 [G] BG:141 [ASN] B5:115 [C] ❌ 6Q8U_A:13 no longer at interface
C:90 [VAL] B:25 [C] BG:197 [LYS] B5:147 [A] ❌ 6Q8U_B:25 no longer at interface
C:25 [SER] A:16 [G] BG:133 [PRO] B5:119 [G] ❌ 6Q8U_C:25 no longer at interface
C:27 [LYS] A:16 [G] BG:135 [VAL] B5:119 [G] ❌ 6Q8U_C:27 no longer at interface
C:40 [GLU] A:14 [G] BG:148 [GLU] B5:116 [G] ❌ 6Q8U_C:40 no longer at interface
C:52 [ASP] B:28 [A] BG:160 [ASP] B5:150 [U] ❌ 6Q8U_C:52 no longer at interface
C:53 [VAL] B:28 [A] BG:161 [VAL] B5:150 [U] ❌ 6Q8U_C:53 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.8 1.18 0.30 0.87 0.25 1.0 0.89 0.60 0.40 0.32 0.38


Other pairs involving 6Q8U_C_A,B or 7O7Y_BG_B5,B8

Total number of entries: 25

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 6Q8U_C_A,B 0.89 0.85 0.61 0.44 L30e-like compare
1JJ2_F_0 7O7Y_BG_B5,B8 0.58 0.94 2.25 0.19 L30e-like compare
5XTM_A_B 6Q8U_C_A,B 0.95 0.79 0.59 0.22 L30e-like compare
5XTM_A_B 7O7Y_BG_B5,B8 0.68 0.71 1.4 0.22 L30e-like compare
6AZ3_G_2 7O7Y_BG_B5,B8 0.79 0.92 1.1 0.25 L30e-like Eukaryotic large subunit ribosomal RNA compare
3LWR_C_D 6Q8U_C_A,B 0.79 0.83 0.49 0.56 L30e-like compare
3LWR_C_D 7O7Y_BG_B5,B8 0.53 0.74 1.47 0.35 L30e-like compare
6AZ3_d_3 6Q8U_C_A,B 0.71 0.68 1.69 0.17 L30e-like compare
1YHQ_F_0 6Q8U_C_A,B 0.88 0.85 0.58 0.44 L30e-like compare
1YHQ_F_0 7O7Y_BG_B5,B8 0.59 0.94 2.25 0.24 L30e-like compare
6Q8U_C_A,B 7O7Y_Al_A2 0.87 0.66 1.35 0.22 L30e-like compare
6Q8U_C_A,B 7O7Y_BG_B5,B8 0.60 0.8 1.18 0.3 L30e-like compare
6Q8U_C_A,B 7OZQ_A_H 0.92 0.87 0.5 0.5 L30e-like compare
6Q8U_C_A,B 7O7Y_Bc_B5 0.78 0.71 1.79 0.15 L30e-like compare
4BW0_B_A 7O7Y_BG_B5,B8 0.56 0.87 1.17 0.3 L30e-like compare
4BW0_B_A 6Q8U_C_A,B 0.99 0.95 0.45 1.0 L30e-like compare
1VQ8_F_0 7O7Y_BG_B5,B8 0.59 0.94 2.24 0.24 L30e-like compare
1VQ8_F_0 6Q8U_C_A,B 0.91 0.85 0.69 0.44 L30e-like compare
7O7Y_BG_B5,B8 7OZQ_A_H 0.65 0.83 1.34 0.36 L30e-like compare
2HVY_D_E 6Q8U_C_A,B 0.84 0.84 0.4 0.56 L30e-like compare
2HVY_D_E 7O7Y_BG_B5,B8 0.55 0.71 1.77 0.4 L30e-like compare
3HAX_D_E 6Q8U_C_A,B 0.89 0.84 0.42 0.56 L30e-like compare
3HAX_D_E 7O7Y_BG_B5,B8 0.54 0.76 1.46 0.39 L30e-like compare
6AZ3_G_1,7 6Q8U_C_A,B 0.83 0.77 1.38 0.2 L30e-like compare
6AZ3_G_1,7 7O7Y_BG_B5,B8 0.69 0.93 1.08 0.38 L30e-like 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare