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All interfaces > All interologs > Interface groups > group139 > 7OZQ_A_H

Interface analysis

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Protein

Cartoon
Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Interface

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Rim - Core

Contacts -

7OZQ_A
7OZQ_H
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:33 [ARG] H:4 [C] 4.58 53.55
A:33 [ARG] H:5 [U] 3.09 53.55
A:34 [LYS] H:28 [A] 3.22 72.19
A:34 [LYS] H:30 [G] 3.39 72.19
A:35 [GLY] H:28 [A] 3.63 98.88
A:35 [GLY] H:29 [U] 3.63 98.88
A:35 [GLY] H:30 [G] 3.12 98.88
A:36 [THR] H:28 [A] 4.16 47.24
A:36 [THR] H:29 [U] 2.76 47.24
A:36 [THR] H:30 [G] 3.54 47.24
A:37 [ASN] H:29 [U] 4.94 73.54
A:37 [ASN] H:30 [G] 3.2 base:BB base/AA stacks 73.54
A:38 [GLU] H:5 [U] 4.77 68.7
A:38 [GLU] H:28 [A] 4.08 68.7
A:38 [GLU] H:30 [G] 2.72 base:BB, base:SC, base:SC 68.7
A:39 [THR] H:30 [G] 4.88 82.49
A:41 [LYS] H:3 [A] 3.22 73.73
A:41 [LYS] H:4 [C] 3.92 73.73
A:45 [ARG] H:3 [A] 3.17 49.77
A:45 [ARG] H:4 [C] 2.93 49.77
A:56 [ASP] H:29 [U] 3.86 98.48
A:57 [VAL] H:29 [U] 3.28 71.22
A:58 [ASP] H:29 [U] 2.76 base:BB, base:BB 66.07
A:59 [PRO] H:29 [U] 3.78 66.02
A:62 [ILE] H:29 [U] 3.0 65.44
A:83 [LYS] H:29 [U] 3.31 80.68
A:92 [ILE] H:28 [A] 3.49 75.25
A:93 [GLU] H:7 [G] 3.71 H:26 [U] 61.22
A:93 [GLU] H:27 [G] 2.8 base:SC 61.22
A:94 [VAL] H:27 [G] 3.29 71.55
A:94 [VAL] H:28 [A] 3.47 71.55
A:95 [ALA] H:28 [A] 2.85 sugar:BB 35.19
A:95 [ALA] H:29 [U] 3.72 35.19
A:96 [ALA] H:28 [A] 3.36 76.25
A:96 [ALA] H:29 [U] 3.5 76.25
A:97 [ALA] H:28 [A] 4.64 80.24
A:97 [ALA] H:29 [U] 2.83 80.24
A:98 [SER] H:29 [U] 4.48 66.27

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group139 7OZQ_A_H A: 50s ribosomal protein l7ae, Pyrococcus furiosus (strain atcc 43587 / dsm 3638 / jcm 8422 / vc1) (genetically engineered) H: RNA, Saccharomyces cerevisiae (synthetic) Q8U160 L30e-like ✔

Interologs

Total number of interologs for this interface: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
1VQ8_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
1YHQ_F_0 7OZQ_A_H 0.91 0.88 0.58 0.5 L30e-like compare
2HVY_D_E 7OZQ_A_H 0.83 0.85 0.26 0.38 L30e-like compare
3HAX_D_E 7OZQ_A_H 0.89 0.86 0.25 0.38 L30e-like compare
3LWR_C_D 7OZQ_A_H 0.78 0.84 0.32 0.38 L30e-like compare
4BW0_B_A 7OZQ_A_H 0.91 0.9 0.62 0.5 L30e-like compare
5XTM_A_B 7OZQ_A_H 1.00 0.85 0.21 0.38 L30e-like compare
6AZ3_G_1,7 7OZQ_A_H 0.68 0.8 1.4 0.27 L30e-like compare
6AZ3_d_3 7OZQ_A_H 0.71 0.62 1.56 0.17 L30e-like compare
6Q8U_C_A,B 7OZQ_A_H 0.92 0.87 0.5 0.5 L30e-like compare
7O7Y_BG_B5,B8 7OZQ_A_H 0.65 0.83 1.34 0.36 L30e-like compare
7O7Y_Bc_B5 7OZQ_A_H 0.74 0.68 1.59 0.12 L30e-like compare