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All interfaces > All interologs > Interface groups > group14 > 4Y4O_1T_1a vs 7K00_o_A

Interface analysis


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Common contacts -

4Y4O_1T
4Y4O_1a
7K00_o
7K00_A
Conserved?
1T:107 [ASP] 1a:1432 [G] o:105 [GLY] A:1432 [G] ✔
1T:108 [ARG] 1a:1432 [G] o:106 [LYS] A:1432 [G] ✔
1T:108 [ARG] 1a:1464 [G] o:106 [LYS] A:1464 [U] ✔
1T:111 [ARG] 1a:1463 [C] o:109 [ARG] A:1463 [U] ✔
1T:111 [ARG] 1a:1464 [G] o:109 [ARG] A:1464 [U] ✔
1T:106 [SER] 1a:1432 [G] o:104 [THR] A:1432 [G] ✔
1T:41 [ARG] 1a:346 [G] o:39 [ARG] A:346 [G] ✔
1T:118 [ARG] 1a:1442A [G] o:114 [LEU] A:1442 [G] ✔
1T:109 [GLU] 1a:1432 [G] o:107 [ALA] A:1432 [G] ❌ 4Y4O_1T_1a
1T:41 [ARG] 1a:345 [C] o:39 [ARG] A:345 [C] ❌ 4Y4O_1T_1a
1T:107 [ASP] 1a:1431 [C] o:105 [GLY] A:1431 [A] ❌ 7K00_A:1431 no longer at interface
1T:106 [SER] 1a:1431 [C] o:104 [THR] A:1431 [A] ❌ 7K00_A:1431 no longer at interface
1T:109 [GLU] 1a:1431 [C] o:107 [ALA] A:1431 [A] ❌ 7K00_A:1431 no longer at interface
1T:41 [ARG] 1a:347 [G] o:39 [ARG] A:347 [G] ❌ 7K00_A:347 no longer at interface
1T:118 [ARG] 1a:1442B [A] o:114 [LEU] A:1443 [C] ❌ 7K00_A:1443 no longer at interface
1T:108 [ARG] 1a:1433 [A] o:106 [LYS] A:1433 [A] ❌ 4Y4O_1a:1433 no longer at interface
1T:111 [ARG] 1a:1462 [G] o:109 [ARG] A:1462 [C] ❌ 4Y4O_1a:1462 no longer at interface
1T:116 [ALA] 1a:1461 [G] o:112 [GLU] A:1461 [G] ❌ 4Y4O_1T:116, 4Y4O_1a:1461 no longer at interface
1T:118 [ARG] 1a:1442 [G] o:114 [LEU] A:1441 [A] ❌ 4Y4O_1a:1442 no longer at interface
1T:36 [GLU] 1a:345 [C] o:34 [GLU] A:345 [C] ❌ 7K00_o:34 no longer at interface
1T:36 [GLU] 1a:346 [G] o:34 [GLU] A:346 [G] ❌ 7K00_o:34 no longer at interface
1T:37 [GLY] 1a:345 [C] o:35 [GLY] A:345 [C] ❌ 7K00_o:35 no longer at interface
1T:37 [GLY] 1a:346 [G] o:35 [GLY] A:346 [G] ❌ 7K00_o:35 no longer at interface
1T:39 [ARG] 1a:345 [C] o:37 [LYS] A:345 [C] ❌ 7K00_o:37 no longer at interface
1T:39 [ARG] 1a:346 [G] o:37 [LYS] A:346 [G] ❌ 7K00_o:37 no longer at interface
1T:43 [GLN] 1a:346 [G] o:41 [GLN] A:346 [G] ❌ 4Y4O_1T:43 no longer at interface
1T:43 [GLN] 1a:345 [C] o:41 [GLN] A:345 [C] ❌ 4Y4O_1T:43 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
SH3 Bacterial small subunit ribosomal RNA 0.97 2.29 0.22 0.95 0.98 0.78 0.6 0.39 0.25 0.33 0.89


Other pairs involving 4Y4O_1T_1a or 7K00_o_A

Total number of entries: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1T_1a 7K00_o_A 0.39 0.97 2.29 0.22 SH3 Bacterial small subunit ribosomal RNA compare