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All interfaces > All interologs > Interface groups > group140 > 6CBD_A_B,C vs 6OZS_B_C,D

Interface analysis


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Common contacts -

6CBD_A
6CBD_B,C
6OZS_B
6OZS_C,D
Conserved?
A:797 [VAL] B:4 [A] B:230 [PHE] C:323 [A] ✔
A:797 [VAL] B:5 [C] B:230 [PHE] C:324 [U] ✔
A:755 [GLY] B:5 [C] B:202 [HIS] C:324 [U] ✔
A:710 [ARG] B:9 [G] B:156 [LYS] C:329 [U] ✔
A:710 [ARG] B:10 [C] B:156 [LYS] D:647 [U] ✔
A:598 [VAL] B:10 [C] B:53 [VAL] D:647 [U] ✔
A:798 [SER] B:4 [A] B:231 [ARG] C:323 [A] ✔
A:798 [SER] B:5 [C] B:231 [ARG] C:324 [U] ✔
A:798 [SER] B:6 [A] B:231 [ARG] C:325 [G] ✔
A:600 [HIS] B:10 [C] B:55 [PHE] D:647 [U] ✔
A:804 [TYR] B:4 [A] B:237 [ARG] C:323 [A] ✔
A:815 [TYR] B:1 [U] B:248 [ARG] C:320 [U] ✔
A:756 [ILE] B:5 [C] B:203 [SER] C:324 [U] ✔
A:799 [ILE] B:5 [C] B:232 [ILE] C:324 [U] ✔
A:760 [SER] B:5 [C] B:204 [THR] C:324 [U] ✔
A:760 [SER] B:6 [A] B:204 [THR] C:325 [G] ✔
A:761 [ARG] B:6 [A] B:205 [LYS] C:325 [G] ✔
A:761 [ARG] B:7 [U] B:205 [LYS] C:326 [C] ✔
A:599 [THR] B:10 [C] B:54 [SER] D:647 [U] ✔
A:709 [LYS] B:5 [C] B:155 [LYS] C:324 [U] ❌ 6OZS_B_C,D
A:709 [LYS] B:6 [A] B:155 [LYS] C:325 [G] ❌ 6OZS_B_C,D
A:601 [PRO] B:10 [C] B:56 [VAL] D:647 [U] ❌ 6OZS_B_C,D
A:804 [TYR] B:5 [C] B:237 [ARG] C:324 [U] ❌ 6OZS_B_C,D
A:815 [TYR] C:23 [A] B:248 [ARG] D:649 [U] ❌ 6OZS_B_C,D
A:756 [ILE] B:4 [A] B:203 [SER] C:323 [A] ❌ 6OZS_B_C,D
A:602 [PRO] B:9 [G] B:57 [LYS] C:329 [U] ❌ 6OZS_B_C,D
A:602 [PRO] B:10 [C] B:57 [LYS] D:647 [U] ❌ 6OZS_B_C,D
A:811 [PHE] B:10 [C] B:244 [ARG] D:647 [U] ❌ 6OZS_B_C,D
A:709 [LYS] B:10 [C] B:155 [LYS] D:647 [U] ❌ 6CBD_A_B,C
A:756 [ILE] B:6 [A] B:203 [SER] C:325 [G] ❌ 6CBD_A_B,C
A:797 [VAL] B:3 [C] B:230 [PHE] C:322 [C] ❌ 6CBD_A_B,C
A:804 [TYR] B:3 [C] B:237 [ARG] C:322 [C] ❌ 6CBD_A_B,C
A:811 [PHE] B:3 [C] B:244 [ARG] C:322 [C] ❌ 6CBD_A_B,C
A:602 [PRO] C:23 [A] B:57 [LYS] D:649 [U] ❌ 6CBD_A_B,C
A:710 [ARG] B:8 [U] B:156 [LYS] C:328 [U] ❌ 6OZS_C:328 no longer at interface
A:756 [ILE] C:27 [U] B:203 [SER] D:653 [U] ❌ 6OZS_D:324 no longer at interface
A:756 [ILE] C:28 [G] B:203 [SER] D:654 [G] ❌ 6OZS_D:325 no longer at interface
A:761 [ARG] B:8 [U] B:205 [LYS] C:328 [U] ❌ 6OZS_C:328 no longer at interface
A:635 [ARG] B:10 [C] B:90 [PRO] D:647 [U] ❌ 6OZS_D:647 no longer at interface
A:812 [ARG] B:1 [U] B:245 [GLU] C:320 [U] ❌ 6OZS_B:245 no longer at interface
A:754 [ALA] B:5 [C] B:201 [ASP] C:324 [U] ❌ 6OZS_B:201 no longer at interface
A:753 [HIS] B:5 [C] B:200 [HIS] C:324 [U] ❌ 6OZS_B:200 no longer at interface
A:753 [HIS] B:6 [A] B:200 [HIS] C:325 [G] ❌ 6OZS_B:200 no longer at interface
A:714 [ARG] B:6 [A] B:170 [LYS] C:325 [G] ❌ 6OZS_B:170 no longer at interface
A:714 [ARG] B:7 [U] B:170 [LYS] C:326 [C] ❌ 6OZS_B:170 no longer at interface
A:638 [ILE] B:10 [C] B:100 [GLU] D:647 [U] ❌ 6CBD_A:638 no longer at interface
A:669 [ASP] B:10 [C] B:126 [ASP] D:647 [U] ❌ 6CBD_A:669 no longer at interface
A:807 [HIS] B:10 [C] B:240 [ASP] D:647 [U] ❌ 6CBD_A:807 no longer at interface
A:808 [LEU] B:4 [A] B:241 [ILE] C:323 [A] ❌ 6CBD_A:808 no longer at interface
A:808 [LEU] B:3 [C] B:241 [ILE] C:322 [C] ❌ 6CBD_A:808 no longer at interface
A:597 [ASP] B:10 [C] B:52 [ASP] D:647 [U] ❌ 6CBD_A:597 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.63 2.82 0.14 0.64 0.39 0.77 0.82 0.49 0.52 0.14 0.53


Other pairs involving 6CBD_A_B,C or 6OZS_B_C,D

Total number of entries: 31

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4OLA_A_B 6OZS_B_C,D 0.51 0.6 2.64 0.09 Ribonuclease H-like compare
4OLA_A_B 6CBD_A_B,C 0.95 0.91 3.17 0.2 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
6OZP_B_C,D 6OZS_B_C,D 0.97 1.0 0.24 1.0 Ribonuclease H-like compare
6MFN_A_C,E 6OZS_B_C,D 0.42 0.63 2.57 0.09 Ribonuclease H-like compare
4KXT_A_B 6CBD_A_B,C 0.91 0.9 2.96 0.17 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 compare
4KXT_A_B 6OZS_B_C,D 0.51 0.61 2.64 0.09 Ribonuclease H-like compare
6OZP_A_C,D 6OZS_B_C,D 0.94 0.94 0.56 0.73 Ribonuclease H-like compare
4KRE_A_R 6CBD_A_B,C 0.86 0.93 2.27 0.09 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
4KRE_A_R 6OZS_B_C,D 0.56 0.62 2.54 0.09 Ribonuclease H-like compare
5JS1_A_B 6OZS_B_C,D 0.52 0.61 2.68 0.0 Ribonuclease H-like compare
5JS1_A_B 6CBD_A_B,C 0.91 0.91 3.24 0.4 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
6OON_A_B 6OZS_B_C,D 0.46 0.61 2.69 0.09 Ribonuclease H-like compare
5AWH_A_C 6CBD_A_B,C 0.59 0.71 3.34 0.16 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
4Z4D_A_B,D 6OZS_B_C,D 0.49 0.63 2.83 0.14 Ribonuclease H-like compare
4Z4D_A_B,D 6CBD_A_B,C 0.95 1.0 0.3 0.93 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
4W5O_A_B,D 6CBD_A_B,C 0.99 1.0 0.36 0.97 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
4W5O_A_B,D 6OZS_B_C,D 0.49 0.63 2.78 0.14 Ribonuclease H-like compare
4KRF_A_R 6CBD_A_B,C 0.86 0.93 2.39 0.17 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
4KRF_A_R 6OZS_B_C,D 0.55 0.62 2.59 0.09 Ribonuclease H-like compare
4W5T_A_B,D 6OZS_B_C,D 0.40 0.63 2.8 0.09 Ribonuclease H-like compare
4W5T_A_B,D 6CBD_A_B,C 0.94 0.99 0.4 0.88 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
5I4A_A_B 6CBD_A_B,C 0.39 0.78 2.46 0.03 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
4F3T_A_R 6OZS_B_C,D 0.56 0.61 2.75 0.09 Ribonuclease H-like compare
4F3T_A_R 6CBD_A_B,C 0.79 0.91 3.2 0.14 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
6CBD_A_B,C 6OZP_A_C,D 0.54 0.61 2.77 0.15 Ribonuclease H-like compare
6CBD_A_B,C 6OZS_B_C,D 0.49 0.63 2.82 0.14 Ribonuclease H-like compare
6CBD_A_B,C 6OZS_A_C,D 0.43 0.61 2.77 0.15 Ribonuclease H-like compare
6CBD_A_B,C 6OON_A_B 0.90 0.95 1.87 0.25 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
6CBD_A_B,C 6D92_A_C 0.57 0.71 3.31 0.11 Ribonuclease H-like & Argonaute, N-terminal domain & SH3 & Middle domain in Argonaute homologs compare
6CBD_A_B,C 6OZP_B_C,D 0.48 0.63 2.7 0.1 Ribonuclease H-like compare
6CBD_A_B,C 6MFN_A_C,E 0.83 0.92 1.43 0.76 Ribonuclease H-like & Argonaute, N-terminal domain & Middle domain in Argonaute homologs compare