Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
View
Focus on
InterfaceRNA
Protein
All
Show chains
Interface
show interface as licoriceCommon contacts -
6OZP_A
|
6OZP_C,D
|
6OZS_B
|
6OZS_C,D
|
Conserved?
|
---|---|---|---|---|
A:204 [THR] | D:41 [U] | B:204 [THR] | C:324 [U] | ✔ |
A:204 [THR] | D:42 [G] | B:204 [THR] | C:325 [G] | ✔ |
A:230 [PHE] | D:40 [A] | B:230 [PHE] | C:323 [A] | ✔ |
A:230 [PHE] | D:41 [U] | B:230 [PHE] | C:324 [U] | ✔ |
A:205 [LYS] | D:42 [G] | B:205 [LYS] | C:325 [G] | ✔ |
A:205 [LYS] | D:43 [C] | B:205 [LYS] | C:326 [C] | ✔ |
A:248 [ARG] | D:37 [U] | B:248 [ARG] | C:320 [U] | ✔ |
A:248 [ARG] | D:38 [G] | B:248 [ARG] | C:321 [G] | ✔ |
A:237 [ARG] | D:39 [C] | B:237 [ARG] | C:322 [C] | ✔ |
A:237 [ARG] | D:40 [A] | B:237 [ARG] | C:323 [A] | ✔ |
A:156 [LYS] | D:46 [U] | B:156 [LYS] | C:329 [U] | ✔ |
A:203 [SER] | D:41 [U] | B:203 [SER] | C:324 [U] | ✔ |
A:203 [SER] | D:42 [G] | B:203 [SER] | C:325 [G] | ✔ |
A:241 [ILE] | D:39 [C] | B:241 [ILE] | C:322 [C] | ✔ |
A:241 [ILE] | D:40 [A] | B:241 [ILE] | C:323 [A] | ✔ |
A:202 [HIS] | D:41 [U] | B:202 [HIS] | C:324 [U] | ✔ |
A:231 [ARG] | D:40 [A] | B:231 [ARG] | C:323 [A] | ✔ |
A:231 [ARG] | D:41 [U] | B:231 [ARG] | C:324 [U] | ✔ |
A:231 [ARG] | D:42 [G] | B:231 [ARG] | C:325 [G] | ✔ |
A:244 [ARG] | D:38 [G] | B:244 [ARG] | C:321 [G] | ✔ |
A:244 [ARG] | D:39 [C] | B:244 [ARG] | C:322 [C] | ✔ |
A:248 [ARG] | D:39 [C] | B:248 [ARG] | C:322 [C] | ❌ 6OZS_B_C,D |
A:230 [PHE] | D:39 [C] | B:230 [PHE] | C:322 [C] | ❌ 6OZP_A_C,D |
A:156 [LYS] | D:45 [U] | B:156 [LYS] | C:328 [U] | ❌ 6OZS_C:328 no longer at interface |
A:200 [HIS] | D:40 [A] | B:200 [HIS] | C:323 [A] | ❌ 6OZS_B:200 no longer at interface |
A:200 [HIS] | D:41 [U] | B:200 [HIS] | C:324 [U] | ❌ 6OZS_B:200 no longer at interface |
A:232 [ILE] | D:41 [U] | B:232 [ILE] | C:324 [U] | ❌ 6OZP_A:232 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribonuclease H-like | 0.94 | 0.56 | 0.73 | 0.99 | 0.85 | 0.95 | 0.73 | 0.94 | 0.90 | 0.60 | 0.67 |
Other pairs involving 6OZP_A_C,D or 6OZS_B_C,D
Total number of entries: 27