Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
View
Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
6OZP_B
|
6OZP_C,D
|
6OZS_A
|
6OZS_C,D
|
Conserved?
|
---|---|---|---|---|
B:204 [THR] | C:18 [U] | A:204 [THR] | D:653 [U] | ✔ |
B:204 [THR] | C:19 [G] | A:204 [THR] | D:654 [G] | ✔ |
B:230 [PHE] | C:17 [A] | A:230 [PHE] | D:652 [A] | ✔ |
B:230 [PHE] | C:18 [U] | A:230 [PHE] | D:653 [U] | ✔ |
B:205 [LYS] | C:19 [G] | A:205 [LYS] | D:654 [G] | ✔ |
B:205 [LYS] | C:20 [C] | A:205 [LYS] | D:655 [C] | ✔ |
B:248 [ARG] | C:14 [U] | A:248 [ARG] | D:649 [U] | ✔ |
B:248 [ARG] | C:15 [G] | A:248 [ARG] | D:650 [G] | ✔ |
B:248 [ARG] | C:16 [C] | A:248 [ARG] | D:651 [C] | ✔ |
B:237 [ARG] | C:16 [C] | A:237 [ARG] | D:651 [C] | ✔ |
B:237 [ARG] | C:17 [A] | A:237 [ARG] | D:652 [A] | ✔ |
B:156 [LYS] | C:23 [U] | A:156 [LYS] | D:658 [U] | ✔ |
B:203 [SER] | C:18 [U] | A:203 [SER] | D:653 [U] | ✔ |
B:203 [SER] | C:19 [G] | A:203 [SER] | D:654 [G] | ✔ |
B:241 [ILE] | C:16 [C] | A:241 [ILE] | D:651 [C] | ✔ |
B:241 [ILE] | C:17 [A] | A:241 [ILE] | D:652 [A] | ✔ |
B:202 [HIS] | C:18 [U] | A:202 [HIS] | D:653 [U] | ✔ |
B:231 [ARG] | C:17 [A] | A:231 [ARG] | D:652 [A] | ✔ |
B:231 [ARG] | C:18 [U] | A:231 [ARG] | D:653 [U] | ✔ |
B:231 [ARG] | C:19 [G] | A:231 [ARG] | D:654 [G] | ✔ |
B:244 [ARG] | C:15 [G] | A:244 [ARG] | D:650 [G] | ✔ |
B:244 [ARG] | C:16 [C] | A:244 [ARG] | D:651 [C] | ✔ |
B:230 [PHE] | C:16 [C] | A:230 [PHE] | D:651 [C] | ❌ 6OZP_B_C,D |
B:156 [LYS] | C:22 [U] | A:156 [LYS] | D:657 [U] | ❌ 6OZS_D:657 no longer at interface |
B:200 [HIS] | C:17 [A] | A:200 [HIS] | D:652 [A] | ❌ 6OZP_B:200 no longer at interface |
B:200 [HIS] | C:18 [U] | A:200 [HIS] | D:653 [U] | ❌ 6OZP_B:200 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribonuclease H-like | 0.94 | 0.45 | 0.73 | 0.98 | 0.85 | 0.95 | 0.73 | 0.96 | 0.89 | 0.89 | 0.75 |
Other pairs involving 6OZP_B_C,D or 6OZS_A_C,D
Total number of entries: 27