RNAprotDB

Contacts -

5L2L_B	5L2L_D	Distance	Hbond nuc:res	Base Stacking	Residue conservation
B:416 [LYS]	D:5 [A]	3.02	base:SC		81.52
B:417 [PHE]	D:4 [A]	3.34		base/AA stacks	66.08
B:417 [PHE]	D:5 [A]	3.45			66.08
B:420 [HIS]	D:4 [A]	3.67			49.18
B:421 [CYS]	D:4 [A]	3.52			98.53
B:422 [THR]	D:4 [A]	3.08	base:BB		73.93
B:423 [ASN]	D:4 [A]	3.6			77.99
B:456 [GLU]	D:5 [A]	2.88	base:SC		19.43
B:457 [ASP]	D:5 [A]	3.0	base:BB		33.61
B:458 [CYS]	D:5 [A]	3.52			97.63
B:459 [ARG]	D:4 [A]	4.88			79.56
B:459 [ARG]	D:5 [A]	2.96	base:BB	base/AA stacks	79.56
B:459 [ARG]	D:7 [A]	3.07		base/AA stacks	79.56
B:460 [PHE]	D:5 [A]	3.74			59.84
B:460 [PHE]	D:6 [A]	3.3		base/AA stacks	59.84
B:460 [PHE]	D:7 [A]	3.78			59.84
B:460 [PHE]	D:8 [A]	4.13			59.84
B:460 [PHE]	D:12 [G]	3.93			59.84
B:463 [ASN]	D:12 [G]	4.77			50.91
B:464 [CYS]	D:6 [A]	3.67			97.7
B:465 [LYS]	D:12 [G]	3.39			73.4
B:466 [ASN]	D:6 [A]	3.8			84.92
B:471 [PHE]	D:5 [A]	3.41		base/AA stacks	79.2

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

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