RNAprotDB

Contacts -

5L2L_B	5L2L_C	Distance	Hbond nuc:res	Base Stacking	Residue conservation
B:419 [THR]	C:6 [A]	2.79			57.3
B:420 [HIS]	C:5 [A]	4.86			49.1
B:420 [HIS]	C:6 [A]	3.57			49.1
B:432 [ARG]	C:6 [A]	3.48			42.8
B:432 [ARG]	C:8 [A]	3.02	sugar:SC	base/AA stacks	42.8
B:432 [ARG]	C:9 [A]	3.03	base:BB		42.8
B:432 [ARG]	C:10 [A]	4.48			42.8
B:433 [SER]	C:9 [A]	3.93			72.5
B:434 [HIS]	C:6 [A]	3.74			35.9
B:435 [ILE]	C:11 [A]	3.75			45.2
B:435 [ILE]	C:12 [G]	3.68			45.2
B:436 [MET]	C:11 [A]	3.6			47.9
B:437 [CYS]	C:11 [A]	3.49			95.6
B:438 [ARG]	C:10 [A]	4.97			64.1
B:438 [ARG]	C:11 [A]	2.93	base:BB, sugar:SC	base/AA stacks	64.1
B:439 [GLU]	C:11 [A]	4.94			40.0
B:445 [ARG]	C:10 [A]	3.52		base/AA stacks	79.2
B:447 [ASP]	C:10 [A]	3.03	base:BB		50.4
B:448 [CYS]	C:10 [A]	3.41			95.1
B:448 [CYS]	C:11 [A]	4.7			95.1
B:449 [LEU]	C:8 [A]	4.56			51.1
B:449 [LEU]	C:9 [A]	3.72			51.1
B:449 [LEU]	C:10 [A]	3.26	base:BB		51.1
B:450 [PHE]	C:9 [A]	4.28			69.4
B:450 [PHE]	C:10 [A]	3.61			69.4
B:450 [PHE]	C:11 [A]	3.27		base/AA stacks	69.4

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

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