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All interfaces > All interologs > Interface groups > group20 > 5L2L_A_G vs 5L2L_B_H

Interface analysis


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Licorice
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Common contacts -

5L2L_A
5L2L_G
5L2L_B
5L2L_H
Conserved?
A:416 [LYS] G:3 [A] B:416 [LYS] H:3 [A] ✔
A:422 [THR] G:4 [A] B:422 [THR] H:4 [A] ✔
A:417 [PHE] G:3 [A] B:417 [PHE] H:3 [A] ✔
A:414 [GLN] G:3 [A] B:414 [GLN] H:3 [A] ✔
A:415 [CYS] G:3 [A] B:415 [CYS] H:3 [A] ✔
A:428 [TYR] G:3 [A] B:428 [TYR] H:3 [A] ✔
A:423 [ASN] G:3 [A] B:423 [ASN] H:3 [A] ✔
A:423 [ASN] G:4 [A] B:423 [ASN] H:4 [A] ✔
A:425 [ARG] G:6 [A] B:425 [ARG] H:6 [A] ✔
A:425 [ARG] G:7 [A] B:425 [ARG] H:7 [A] ✔
A:425 [ARG] G:8 [A] B:425 [ARG] H:8 [A] ✔
A:427 [LYS] G:3 [A] B:427 [LYS] H:3 [A] ✔
A:426 [CYS] G:3 [A] B:426 [CYS] H:3 [A] ✔
A:424 [LYS] G:4 [A] B:424 [LYS] H:4 [A] ✔
A:424 [LYS] G:8 [A] B:424 [LYS] H:8 [A] ✔
A:424 [LYS] G:6 [A] B:424 [LYS] H:6 [A] ❌ 5L2L_A_G
A:423 [ASN] G:5 [A] B:423 [ASN] H:5 [A] ❌ 5L2L_G:5 no longer at interface
A:413 [GLU] G:3 [A] B:413 [GLU] H:3 [A] ❌ 5L2L_B:413 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
CCCH zinc finger 0.95 0.39 1.00 0.95 0.7 1.0 1.0 0.94 0.97 0.67 0.67


Other pairs involving 5L2L_A_G or 5L2L_B_H

Total number of entries: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
5L2L_A_G 5L2L_B_H 0.94 0.95 0.39 1.0 CCCH zinc finger compare