RNAprotDB

Interface analysis

Contacts -

5L2L_B	5L2L_H	Distance	Hbond nuc:res	Base Stacking	Residue conservation
B:414 [GLN]	H:3 [A]	3.16	base:BB		49.8
B:415 [CYS]	H:3 [A]	3.46			98.4
B:416 [LYS]	H:3 [A]	3.14	base:BB		81.5
B:417 [PHE]	H:3 [A]	3.85			66.0
B:422 [THR]	H:4 [A]	3.28			73.9
B:423 [ASN]	H:3 [A]	4.08			77.9
B:423 [ASN]	H:4 [A]	3.51			77.9
B:423 [ASN]	H:5 [A]	4.97			77.9
B:424 [LYS]	H:4 [A]	4.72			48.1
B:424 [LYS]	H:6 [A]	3.05			48.1
B:424 [LYS]	H:8 [A]	3.26	base:BB		48.1
B:425 [ARG]	H:6 [A]	4.27			58.1
B:425 [ARG]	H:7 [A]	2.71			58.1
B:425 [ARG]	H:8 [A]	3.18		base/AA stacks	58.1
B:426 [CYS]	H:3 [A]	4.63			96.4
B:427 [LYS]	H:3 [A]	3.41			51.7
B:428 [TYR]	H:3 [A]	2.98		base/AA stacks	63.3

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)