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All interfaces > All interologs > Interface groups > group22 > 6AZ3_N_8

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Protein

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

6AZ3_N
6AZ3_8
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
N:10 [ARG] 8:91 [G] 4.49 76.8
N:11 [PHE] 8:91 [G] 4.18 0.2
N:11 [PHE] 8:92 [A] 4.17 8:89 [G] 0.2
N:55 [ARG] 8:92 [A] 4.64 8:89 [G] 26.4
N:57 [LEU] 8:92 [A] 2.97 8:89 [G] sugar:BB 0.5
N:57 [LEU] 8:93 [U] 3.43 8:88 [A] 0.5
N:131 [ILE] 8:93 [U] 4.96 8:88 [A] 26.2
N:201 [ALA] 8:65 [C] 4.61 31.1
N:201 [ALA] 8:107 [U] 3.6 8:72 [A] 31.1
N:202 [PRO] 8:65 [C] 3.36 41.9
N:203 [LYS] 8:65 [C] 3.24 sugar:BB 35.8
N:203 [LYS] 8:66 [A] 3.21 8:17 [U] 35.8
N:203 [LYS] 8:67 [G] 3.77 8:16 [C] 35.8

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group22 6AZ3_N_8 N: 60s ribosomal protein l10, putative, Leishmania donovani (natural) 8: rRNA 5s, Leishmania donovani (natural) A0A3S5H5C4 Ribosomal protein L10e 5S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_N_8 7O7Y_BI_B7 0.67 0.98 0.81 0.25 Ribosomal protein L10e 5S ribosomal RNA compare