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All interfaces > All interologs > Interface groups > group24 > 6AZ3_U_3

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Licorice
Surface

RNA

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

6AZ3_U
6AZ3_3
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
U:14 [VAL] 3:60 [U] 3.38 0.0
U:16 [GLN] 3:60 [U] 2.5 base:SC 0.0
U:24 [LYS] 3:48 [G] 4.92 3:66 [C] 0.0
U:24 [LYS] 3:49 [G] 4.3 3:65 [C] 0.0
U:26 [PHE] 3:49 [G] 4.78 3:65 [C] 0.0
U:56 [LYS] 3:58 [C] 4.88 4:97 [G] 0.0
U:56 [LYS] 3:59 [U] 2.44 0.0
U:56 [LYS] 3:60 [U] 3.27 0.0
U:57 [LEU] 3:60 [U] 4.28 0.0
U:58 [ASN] 3:60 [U] 3.51 base:BB 0.0
U:59 [GLY] 3:60 [U] 2.56 base:BB 0.0
U:60 [ARG] 3:60 [U] 5.0 0.0
U:61 [LYS] 3:58 [C] 3.72 4:97 [G] 0.0
U:61 [LYS] 3:59 [U] 2.92 0.0
U:84 [ALA] 3:48 [G] 4.51 3:66 [C] 0.0
U:85 [TYR] 3:48 [G] 4.8 3:66 [C] 0.0
U:85 [TYR] 3:60 [U] 3.22 0.0
U:86 [ARG] 3:47 [C] 3.51 0.0
U:86 [ARG] 3:48 [G] 3.06 3:66 [C] 0.0
U:86 [ARG] 3:49 [G] 3.5 3:65 [C] 0.0
U:86 [ARG] 3:60 [U] 4.4 0.0
U:86 [ARG] 3:61 [U] 2.78 3:53 [G] 0.0
U:87 [LYS] 3:49 [G] 3.13 3:65 [C] 0.0
U:87 [LYS] 3:50 [U] 2.67 3:64 [A] 0.0
U:88 [LYS] 3:49 [G] 3.71 3:65 [C] 0.0
U:88 [LYS] 3:50 [U] 2.95 3:64 [A] 0.0
U:88 [LYS] 3:51 [G] 2.51 3:63 [C] base:SC, base:SC 0.0
U:88 [LYS] 3:52 [A] 4.05 3:62 [U] 0.0
U:88 [LYS] 3:61 [U] 3.9 3:53 [G] 0.0
U:88 [LYS] 3:62 [U] 4.37 3:52 [A] 0.0
U:88 [LYS] 3:63 [C] 4.16 3:51 [G] 0.0
U:88 [LYS] 3:64 [A] 4.89 3:50 [U] 0.0
U:89 [TYR] 3:60 [U] 3.13 base/AA stacks 0.0
U:91 [LYS] 3:50 [U] 4.84 3:64 [A] 0.0
U:91 [LYS] 3:51 [G] 2.71 3:63 [C] 0.0
U:91 [LYS] 3:52 [A] 3.61 3:62 [U] 0.0
U:92 [TYR] 3:53 [G] 4.88 3:61 [U] 0.0
U:92 [TYR] 3:59 [U] 3.18 0.0
U:92 [TYR] 3:60 [U] 4.24 0.0
U:92 [TYR] 3:61 [U] 3.3 3:53 [G] base/AA stacks 0.0
U:95 [LYS] 3:52 [A] 4.06 3:62 [U] 0.0
U:95 [LYS] 3:53 [G] 4.78 3:61 [U] 0.0
U:95 [LYS] 3:54 [C] 3.78 0.0
U:95 [LYS] 3:55 [U] 3.54 0.0
U:96 [LYS] 3:55 [U] 3.68 0.0
U:96 [LYS] 3:58 [C] 4.61 4:97 [G] 0.0
U:96 [LYS] 3:59 [U] 2.62 base:SC 0.0
U:99 [LYS] 3:55 [U] 2.63 0.0
U:99 [LYS] 3:56 [U] 3.83 0.0
U:100 [LYS] 3:56 [U] 4.74 0.0
U:100 [LYS] 3:57 [U] 3.48 4:98 [A] 0.0
U:104 [ARG] 3:53 [G] 3.23 3:61 [U] 0.0
U:104 [ARG] 3:54 [C] 4.25 0.0
U:104 [ARG] 3:55 [U] 3.37 base:SC 0.0
U:108 [ARG] 3:51 [G] 3.63 3:63 [C] 0.0
U:108 [ARG] 3:52 [A] 3.03 3:62 [U] 0.0
U:108 [ARG] 3:153 [G] 4.44 3:167 [C] 0.0
U:108 [ARG] 3:154 [C] 2.44 3:166 [A] 0.0
U:108 [ARG] 3:155 [U] 4.82 3:165 [U] 0.0
U:109 [ILE] 3:51 [G] 4.94 3:63 [C] 0.0
U:109 [ILE] 3:52 [A] 4.68 3:62 [U] 0.0
U:110 [LEU] 3:51 [G] 3.41 3:63 [C] 0.0
U:110 [LEU] 3:154 [C] 3.69 3:166 [A] 0.0
U:110 [LEU] 3:155 [U] 4.56 3:165 [U] 0.0
U:111 [ALA] 3:50 [U] 3.39 3:64 [A] 0.0
U:111 [ALA] 3:51 [G] 2.86 3:63 [C] 0.0
U:113 [GLY] 3:50 [U] 4.51 3:64 [A] 0.0
U:117 [TYR] 3:50 [U] 3.58 3:64 [A] 0.0
U:117 [TYR] 3:51 [G] 4.47 3:63 [C] 0.0
U:120 [LYS] 3:154 [C] 4.32 3:166 [A] 0.0
U:120 [LYS] 3:155 [U] 2.45 3:165 [U] 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group24 6AZ3_U_3 U: 60s ribosomal protein l22, putative, Leishmania donovani (natural) 3: rRNA gamma, Leishmania donovani (natural) A0A3Q8IJA8 Ribosomal protein L22e ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_U_3 7O7Y_BU_B5 0.86 0.85 0.92 0.59 Ribosomal protein L22e compare