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All interfaces > All interologs > Interface groups > group26 > 7O7Y_Bj_B8

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Licorice
Surface

RNA

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Y_Bj
7O7Y_B8
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
Bj:19 [CYS] B8:43 [A] 4.78 B8:100 [U] 89.3
Bj:20 [ARG] B8:42 [G] 4.57 B8:101 [C] 73.4
Bj:20 [ARG] B8:101 [C] 2.47 B8:42 [G] sugar:BB 73.4
Bj:20 [ARG] B8:102 [G] 2.29 B8:41 [A] 73.4
Bj:20 [ARG] B8:109 [C] 2.91 base/AA stacks 73.4
Bj:21 [ARG] B8:42 [G] 2.86 B8:101 [C] base:BB 91.7
Bj:21 [ARG] B8:43 [A] 3.6 B8:100 [U] 91.7
Bj:21 [ARG] B8:101 [C] 4.46 B8:42 [G] 91.7
Bj:21 [ARG] B8:102 [G] 3.36 B8:41 [A] 91.7
Bj:21 [ARG] B8:103 [A] 3.31 B8:39 [G] 91.7
Bj:22 [CYS] B8:42 [G] 4.81 B8:101 [C] 80.1
Bj:22 [CYS] B8:43 [A] 3.19 B8:100 [U] 80.1
Bj:23 [GLY] B8:43 [A] 3.21 B8:100 [U] 90.3
Bj:23 [GLY] B8:44 [A] 4.56 B8:99 [U] 90.3
Bj:39 [TYR] B8:102 [G] 3.83 B8:41 [A] 58.9
Bj:39 [TYR] B8:103 [A] 3.53 B8:39 [G] 58.9
Bj:40 [PRO] B8:103 [A] 4.75 B8:39 [G] 58.8
Bj:41 [ALA] B8:103 [A] 4.36 B8:39 [G] 46.7
Bj:42 [LYS] B8:103 [A] 3.8 B8:39 [G] 54.0
Bj:42 [LYS] B8:104 [A] 3.04 B8:40 [A] 54.0
Bj:57 [ASN] B8:42 [G] 3.07 B8:101 [C] sugar:SC 50.6
Bj:57 [ASN] B8:43 [A] 3.93 B8:100 [U] 50.6
Bj:58 [THR] B8:41 [A] 4.39 B8:102 [G] 76.7
Bj:58 [THR] B8:42 [G] 3.75 B8:101 [C] 76.7
Bj:59 [THR] B8:41 [A] 2.52 B8:102 [G] sugar:SC 59.8
Bj:59 [THR] B8:42 [G] 4.0 B8:101 [C] 59.8
Bj:60 [GLY] B8:41 [A] 3.93 B8:102 [G] 78.7
Bj:60 [GLY] B8:42 [G] 3.0 B8:101 [C] 78.7
Bj:61 [THR] B8:42 [G] 3.61 B8:101 [C] 84.3
Bj:61 [THR] B8:43 [A] 4.4 B8:100 [U] 84.3
Bj:62 [GLY] B8:42 [G] 2.8 B8:101 [C] 78.5
Bj:62 [GLY] B8:43 [A] 3.21 B8:100 [U] 78.5
Bj:63 [ARG] B8:42 [G] 3.69 B8:101 [C] 81.5
Bj:63 [ARG] B8:43 [A] 4.13 B8:100 [U] 81.5
Bj:63 [ARG] B8:44 [A] 4.08 B8:99 [U] 81.5
Bj:63 [ARG] B8:45 [C] 4.64 B8:58 [G] 81.5
Bj:63 [ARG] B8:57 [C] 3.28 B8:46 [G] base/AA stacks 81.5
Bj:63 [ARG] B8:58 [G] 2.43 B8:45 [C] base:SC, base:SC 81.5
Bj:63 [ARG] B8:99 [U] 4.36 B8:44 [A] 81.5
Bj:64 [MET] B8:41 [A] 3.47 B8:102 [G] 79.9
Bj:64 [MET] B8:42 [G] 2.84 B8:101 [C] 79.9
Bj:65 [ARG] B8:41 [A] 3.22 B8:102 [G] 65.0
Bj:65 [ARG] B8:42 [G] 4.29 B8:101 [C] 65.0
Bj:65 [ARG] B8:43 [A] 3.94 B8:100 [U] 65.0
Bj:65 [ARG] B8:44 [A] 3.85 B8:99 [U] 65.0
Bj:65 [ARG] B8:58 [G] 3.11 B8:45 [C] base/AA stacks 65.0
Bj:65 [ARG] B8:98 [C] 3.9 65.0
Bj:65 [ARG] B8:99 [U] 2.7 B8:44 [A] base:SC, base:SC 65.0
Bj:65 [ARG] B8:100 [U] 3.86 B8:43 [A] base:SC 65.0
Bj:66 [HIS] B8:35 [C] 3.1 51.2
Bj:66 [HIS] B8:36 [G] 3.09 51.2
Bj:66 [HIS] B8:40 [A] 3.42 B8:104 [A] 51.2
Bj:66 [HIS] B8:41 [A] 2.62 B8:102 [G] 51.2
Bj:67 [LEU] B8:35 [C] 3.61 63.6
Bj:67 [LEU] B8:40 [A] 4.35 B8:104 [A] 63.6
Bj:67 [LEU] B8:41 [A] 2.93 B8:102 [G] 63.6
Bj:68 [LYS] B8:56 [G] 4.66 B8:47 [C] 68.5
Bj:68 [LYS] B8:57 [C] 2.84 B8:46 [G] 68.5
Bj:70 [VAL] B8:34 [U] 3.63 71.1
Bj:70 [VAL] B8:35 [C] 3.84 71.1
Bj:70 [VAL] B8:36 [G] 4.85 71.1
Bj:71 [TYR] B8:34 [U] 3.42 6.7
Bj:72 [ARG] B8:93 [C] 3.56 B8:65 [A] base/AA stacks 62.3
Bj:72 [ARG] B8:94 [G] 3.07 62.3
Bj:73 [ARG] B8:94 [G] 3.68 66.3
Bj:74 [PHE] B8:32 [C] 3.4 B5:342 [G] 46.3
Bj:74 [PHE] B8:33 [G] 3.69 B5:339 [C] 46.3
Bj:74 [PHE] B8:34 [U] 3.23 base/AA stacks 46.3
Bj:75 [ARG] B8:93 [C] 4.74 B8:65 [A] 59.9
Bj:76 [HIS] B8:92 [U] 4.38 B8:66 [A] 64.6
Bj:76 [HIS] B8:93 [C] 2.51 B8:65 [A] 64.6
Bj:76 [HIS] B8:94 [G] 3.72 64.6
Bj:78 [PHE] B8:34 [U] 3.74 60.2
Bj:79 [ARG] B8:93 [C] 3.82 B8:65 [A] 69.5
Bj:79 [ARG] B8:94 [G] 3.21 base/AA stacks 69.5
Bj:79 [ARG] B8:95 [A] 4.93 B8:64 [U] 69.5
Bj:80 [GLU] B8:94 [G] 4.52 43.0
Bj:80 [GLU] B8:95 [A] 3.61 B8:64 [U] 43.0
Bj:81 [GLY] B8:94 [G] 4.31 70.3
Bj:81 [GLY] B8:95 [A] 2.71 B8:64 [U] 70.3
Bj:82 [THR] B8:94 [G] 2.48 base:SC, sugar:BB 55.0
Bj:82 [THR] B8:95 [A] 3.96 B8:64 [U] 55.0
Bj:83 [THR] B8:66 [A] 4.96 B8:92 [U] 4.5
Bj:83 [THR] B8:94 [G] 3.58 4.5
Bj:83 [THR] B8:95 [A] 3.62 B8:64 [U] 4.5
Bj:84 [PRO] B8:66 [A] 3.28 B8:92 [U] 70.9
Bj:84 [PRO] B8:67 [U] 3.35 B8:91 [A] 70.9
Bj:84 [PRO] B8:94 [G] 3.52 70.9
Bj:85 [LYS] B8:67 [U] 3.25 B8:91 [A] 1.9
Bj:86 [PRO] B8:66 [A] 4.9 B8:92 [U] 23.5
Bj:86 [PRO] B8:67 [U] 3.73 B8:91 [A] 23.5
Bj:87 [LYS] B8:67 [U] 3.16 B8:91 [A] 37.0
Bj:87 [LYS] B8:68 [G] 3.23 B8:90 [C] 37.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group26 7O7Y_Bj_B8 Bj: Ribosomal protein l37, Oryctolagus cuniculus (natural) B8: 5.8s rRNA, Oryctolagus cuniculus (natural) U3KPD5 Rubredoxin-related 5.8S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_j_7 7O7Y_Bj_B8 0.90 0.91 1.18 0.51 Rubredoxin-related 5.8S ribosomal RNA compare