Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
6XJQ_H
|
6XJQ_A
|
6XJW_H
|
6XJW_A
|
Conserved?
|
---|---|---|---|---|
H:35 [SER] | A:32 [U] | H:35 [SER] | A:32 [U] | ✔ |
H:110 [TYR] | A:25 [U] | H:110 [TYR] | A:25 [U] | ✔ |
H:110 [TYR] | A:30 [G] | H:110 [TYR] | A:30 [G] | ✔ |
H:110 [TYR] | A:33 [A] | H:110 [TYR] | A:33 [A] | ✔ |
H:110 [TYR] | A:34 [U] | H:110 [TYR] | A:34 [U] | ✔ |
H:34 [SER] | A:32 [U] | H:34 [SER] | A:32 [U] | ✔ |
H:58 [SER] | A:32 [U] | H:58 [SER] | A:32 [U] | ✔ |
H:58 [SER] | A:33 [A] | H:58 [SER] | A:33 [A] | ✔ |
H:57 [TYR] | A:32 [U] | H:57 [TYR] | A:32 [U] | ✔ |
H:111 [TRP] | A:32 [U] | H:111 [TRP] | A:32 [U] | ✔ |
H:111 [TRP] | A:33 [A] | H:111 [TRP] | A:33 [A] | ✔ |
H:111 [TRP] | A:34 [U] | H:111 [TRP] | A:34 [U] | ✔ |
H:105 [HIS] | A:33 [A] | H:105 [HIS] | A:33 [A] | ✔ |
H:60 [SER] | A:33 [A] | H:60 [SER] | A:33 [A] | ✔ |
H:108 [ASN] | A:33 [A] | H:108 [ASN] | A:33 [A] | ✔ |
H:109 [TYR] | A:25 [U] | H:109 [TYR] | A:25 [U] | ✔ |
H:109 [TYR] | A:30 [G] | H:109 [TYR] | A:30 [G] | ✔ |
H:109 [TYR] | A:33 [A] | H:109 [TYR] | A:33 [A] | ✔ |
H:109 [TYR] | A:34 [U] | H:109 [TYR] | A:34 [U] | ✔ |
H:106 [TYR] | A:33 [A] | H:106 [TYR] | A:33 [A] | ✔ |
H:55 [SER] | A:32 [U] | H:55 [SER] | A:32 [U] | ✔ |
H:55 [SER] | A:33 [A] | H:55 [SER] | A:33 [A] | ✔ |
H:104 [TYR] | A:32 [U] | H:104 [TYR] | A:32 [U] | ✔ |
H:104 [TYR] | A:33 [A] | H:104 [TYR] | A:33 [A] | ✔ |
H:33 [SER] | A:32 [U] | H:33 [SER] | A:32 [U] | ✔ |
H:107 [LYS] | A:33 [A] | H:107 [LYS] | A:33 [A] | ❌ 6XJQ_H:107 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 1.0 | 0.06 | 1.00 | 1.0 | 0.99 | 1.0 | 1.0 | 1.00 | 1.00 | 1.00 | 1.00 |
Other pairs involving 6XJQ_H_A or 6XJW_H_A
Total number of entries: 1