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All interfaces > All interologs > Interface groups > group32 > 1GTF_L_W vs 1GTN_L_W

Interface analysis


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Common contacts -

1GTF_L
1GTF_W
1GTN_L
1GTN_W
Conserved?
L:35 [SER] W:104 [U] L:35 [SER] W:104 [C] ✔
L:35 [SER] W:107 [A] L:35 [SER] W:107 [A] ✔
L:39 [ASP] W:106 [G] L:39 [ASP] W:106 [G] ✔
L:18 [GLY] W:106 [G] L:18 [GLY] W:106 [G] ✔
L:38 [LEU] W:106 [G] L:38 [LEU] W:106 [G] ✔
L:58 [ARG] W:102 [A] L:58 [ARG] W:102 [A] ✔
L:58 [ARG] W:103 [G] L:58 [ARG] W:103 [G] ✔
L:58 [ARG] W:104 [U] L:58 [ARG] W:104 [C] ✔
L:36 [GLU] W:107 [A] L:36 [GLU] W:107 [A] ✔
L:36 [GLU] W:108 [G] L:36 [GLU] W:108 [G] ✔
L:34 [HIS] W:107 [A] L:34 [HIS] W:107 [A] ✔
L:34 [HIS] W:108 [G] L:34 [HIS] W:108 [G] ✔
L:56 [LYS] W:102 [A] L:56 [LYS] W:102 [A] ✔
L:56 [LYS] W:103 [G] L:56 [LYS] W:103 [G] ✔
L:30 [THR] W:103 [G] L:30 [THR] W:103 [G] ✔
L:24 [LEU] W:103 [G] L:24 [LEU] W:103 [G] ✔
L:32 [PHE] W:103 [G] L:32 [PHE] W:103 [G] ✔
L:32 [PHE] W:104 [U] L:32 [PHE] W:104 [C] ✔
L:20 [ASN] W:104 [U] L:20 [ASN] W:104 [C] ✔
L:37 [LYS] W:104 [U] L:37 [LYS] W:104 [C] ✔
L:37 [LYS] W:106 [G] L:37 [LYS] W:106 [G] ✔
L:37 [LYS] W:107 [A] L:37 [LYS] W:107 [A] ✔
L:17 [ASP] W:106 [G] L:17 [ASP] W:106 [G] ✔
L:31 [ARG] W:103 [G] L:31 [ARG] W:103 [G] ✔
L:35 [SER] W:106 [G] L:35 [SER] W:106 [G] ❌ 1GTN_L_W
L:38 [LEU] W:107 [A] L:38 [LEU] W:107 [A] ❌ 1GTF_L_W
L:22 [ILE] W:104 [U] L:22 [ILE] W:104 [C] ❌ 1GTN_L:22 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Trp RNA-binding attenuation protein (TRAP) 0.97 0.22 0.83 1.0 0.73 1.0 1.0 0.98 0.85 0.80 0.33


Other pairs involving 1GTF_L_W or 1GTN_L_W

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1C9S_L_W 1GTN_L_W 0.92 0.95 0.25 0.67 Trp RNA-binding attenuation protein (TRAP) compare
1C9S_L_W 1GTF_L_W 0.94 0.98 0.14 0.67 Trp RNA-binding attenuation protein (TRAP) compare
1GTF_L_W 1GTN_L_W 0.98 0.97 0.22 0.83 Trp RNA-binding attenuation protein (TRAP) compare