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All interfaces > All interologs > Interface groups > group34 > 4WAN_E_F

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Licorice
Surface

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

4WAN_E
4WAN_F
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
E:163 [ASN] F:5 [C] 4.5 97.38
E:163 [ASN] F:6 [U] 3.68 97.38
E:163 [ASN] F:7 [A] 4.57 97.38
E:165 [VAL] F:6 [U] 4.99 71.49
E:165 [VAL] F:7 [A] 3.77 71.49
E:166 [GLY] F:6 [U] 3.45 sugar:BB 89.54
E:166 [GLY] F:7 [A] 4.65 89.54
E:167 [LEU] F:6 [U] 3.78 75.45
E:169 [LEU] F:6 [U] 3.6 67.65
E:169 [LEU] F:7 [A] 3.13 67.65
E:169 [LEU] F:8 [A] 3.75 67.65
E:170 [GLY] F:6 [U] 3.0 99.0
E:170 [GLY] F:7 [A] 4.18 99.0
E:171 [PRO] F:6 [U] 3.42 95.5
E:171 [PRO] F:7 [A] 3.65 95.5
E:172 [ARG] F:6 [U] 3.94 81.05
E:172 [ARG] F:7 [A] 2.63 81.05
E:172 [ARG] F:8 [A] 3.79 81.05
E:173 [GLY] F:7 [A] 3.72 93.99
E:173 [GLY] F:8 [A] 3.46 93.99
E:176 [LEU] F:8 [A] 3.18 65.28
E:177 [ARG] F:8 [A] 3.03 sugar:SC 71.27
E:186 [LYS] F:9 [C] 3.92 74.61
E:186 [LYS] F:10 [A] 4.03 74.61
E:187 [ILE] F:8 [A] 3.78 94.2
E:188 [ALA] F:8 [A] 3.61 19.16
E:188 [ALA] F:9 [C] 4.22 19.16
E:189 [ILE] F:8 [A] 3.02 base:BB, base:BB 90.08
E:190 [ARG] F:8 [A] 3.09 base:SC 88.41
E:190 [ARG] F:9 [C] 2.93 base:SC, base:SC 88.41
E:193 [GLY] F:7 [A] 4.78 91.19
E:194 [SER] F:7 [A] 3.08 90.62
E:194 [SER] F:8 [A] 4.49 90.62
E:195 [VAL] F:7 [A] 3.8 49.63
E:196 [LYS] F:7 [A] 3.15 74.75
E:205 [PRO] F:9 [C] 3.32 12.21
E:245 [PRO] F:3 [U] 4.72 56.95
E:247 [GLY] F:3 [U] 3.47 4.37
E:248 [GLN] F:3 [U] 3.46 24.01
E:249 [ASN] F:3 [U] 2.87 base:BB 80.75
E:250 [ASP] F:3 [U] 4.93 27.92
E:252 [LYS] F:3 [U] 3.13 86.96
E:252 [LYS] F:5 [C] 3.13 base:SC 86.96
E:252 [LYS] F:6 [U] 3.27 86.96
E:253 [ARG] F:3 [U] 4.06 50.37
E:253 [ARG] F:4 [A] 4.5 50.37
E:255 [GLN] F:6 [U] 3.01 95.55
E:256 [LEU] F:3 [U] 3.75 79.66
E:256 [LEU] F:4 [A] 2.9 sugar:BB 79.66
E:256 [LEU] F:5 [C] 3.17 79.66
E:256 [LEU] F:6 [U] 3.97 79.66
E:257 [ARG] F:4 [A] 3.6 58.46
E:259 [LEU] F:4 [A] 3.71 80.68
E:259 [LEU] F:5 [C] 3.49 80.68
E:259 [LEU] F:6 [U] 3.36 80.68
E:259 [LEU] F:7 [A] 3.99 80.68
E:260 [ALA] F:4 [A] 3.28 88.63
E:265 [THR] F:4 [A] 3.7 85.55
E:266 [LEU] F:4 [A] 3.72 50.9
E:267 [ARG] F:2 [A] 3.25 92.26
E:267 [ARG] F:3 [U] 2.18 92.26
E:267 [ARG] F:4 [A] 3.02 base:BB base/AA stacks 92.26

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group34 4WAN_E_F E: Branchpoint-bridging protein, Saccharomyces cerevisiae (genetically engineered) F: N/A Q12186 Eukaryotic type KH-domain (KH-domain type I) ✘

Interologs

Total number of interologs for this interface: 2

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4WAN_C_D 4WAN_E_F 0.96 0.94 0.68 0.89 Eukaryotic type KH-domain (KH-domain type I) compare
1EC6_A_D 4WAN_E_F 0.80 0.65 1.88 0.31 Eukaryotic type KH-domain (KH-domain type I) compare