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All interfaces > All interologs > Interface groups > group36 > 1VQ8_I_0 vs 7O7Y_Bt_B5

Interface analysis


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Common contacts -

1VQ8_I
1VQ8_0
7O7Y_Bt
7O7Y_B5
Conserved?
I:131 [THR] 0:1164 [U] Bt:135 [THR] B5:1913 [U] ✔
I:131 [THR] 0:1166 [A] Bt:135 [THR] B5:1915 [G] ✔
I:131 [THR] 0:1183 [C] Bt:135 [THR] B5:1932 [C] ✔
I:131 [THR] 0:1192 [A] Bt:135 [THR] B5:1941 [A] ✔
I:130 [GLY] 0:1163 [G] Bt:134 [GLY] B5:1912 [G] ✔
I:130 [GLY] 0:1183 [C] Bt:134 [GLY] B5:1932 [C] ✔
I:130 [GLY] 0:1192 [A] Bt:134 [GLY] B5:1941 [A] ✔
I:127 [GLU] 0:1162 [G] Bt:131 [GLU] B5:1911 [G] ✔
I:127 [GLU] 0:1163 [G] Bt:131 [GLU] B5:1912 [G] ✔
I:127 [GLU] 0:1184 [C] Bt:131 [GLU] B5:1933 [C] ✔
I:127 [GLU] 0:1185 [U] Bt:131 [GLU] B5:1934 [G] ✔
I:88 [GLY] 0:1168 [C] Bt:98 [ILE] B5:1917 [C] ✔
I:126 [LYS] 0:1184 [C] Bt:130 [LYS] B5:1933 [C] ✔
I:126 [LYS] 0:1185 [U] Bt:130 [LYS] B5:1934 [G] ✔
I:118 [SER] 0:1185 [U] Bt:121 [LEU] B5:1934 [G] ✔
I:118 [SER] 0:1186 [C] Bt:121 [LEU] B5:1935 [C] ✔
I:134 [SER] 0:1167 [G] Bt:138 [SER] B5:1916 [C] ✔
I:134 [SER] 0:1181 [A] Bt:138 [SER] B5:1930 [A] ✔
I:134 [SER] 0:1192 [A] Bt:138 [SER] B5:1941 [A] ✔
I:119 [TYR] 0:1186 [C] Bt:122 [ALA] B5:1935 [C] ✔
I:76 [ALA] 0:1164 [U] Bt:78 [SER] B5:1913 [U] ✔
I:76 [ALA] 0:1166 [A] Bt:78 [SER] B5:1915 [G] ✔
I:76 [ALA] 0:1167 [G] Bt:78 [SER] B5:1916 [C] ✔
I:116 [LEU] 0:1163 [G] Bt:119 [ARG] B5:1912 [G] ✔
I:80 [LYS] 0:1167 [G] Bt:82 [ILE] B5:1916 [C] ✔
I:87 [THR] 0:1169 [U] Bt:92 [ARG] B5:1918 [A] ✔
I:135 [LEU] 0:1167 [G] Bt:139 [VAL] B5:1916 [C] ✔
I:74 [PRO] 0:1164 [U] Bt:75 [PRO] B5:1913 [U] ✔
I:75 [THR] 0:1163 [G] Bt:76 [SER] B5:1912 [G] ✔
I:75 [THR] 0:1164 [U] Bt:76 [SER] B5:1913 [U] ✔
I:123 [ASN] 0:1185 [U] Bt:127 [GLY] B5:1934 [G] ✔
I:129 [VAL] 0:1183 [C] Bt:133 [LEU] B5:1932 [C] ✔
I:88 [GLY] 0:1167 [G] Bt:98 [ILE] B5:1916 [C] ❌ 7O7Y_Bt_B5
I:119 [TYR] 0:1187 [U] Bt:122 [ALA] B5:1936 [U] ❌ 7O7Y_Bt_B5
I:116 [LEU] 0:1162 [G] Bt:119 [ARG] B5:1911 [G] ❌ 7O7Y_Bt_B5
I:80 [LYS] 0:1168 [C] Bt:82 [ILE] B5:1917 [C] ❌ 7O7Y_Bt_B5
I:87 [THR] 0:1168 [C] Bt:92 [ARG] B5:1917 [C] ❌ 7O7Y_Bt_B5
I:74 [PRO] 0:1163 [G] Bt:75 [PRO] B5:1912 [G] ❌ 7O7Y_Bt_B5
I:123 [ASN] 0:1186 [C] Bt:127 [GLY] B5:1935 [C] ❌ 7O7Y_Bt_B5
I:129 [VAL] 0:1184 [C] Bt:133 [LEU] B5:1933 [C] ❌ 7O7Y_Bt_B5
I:116 [LEU] 0:1164 [U] Bt:119 [ARG] B5:1913 [U] ❌ 1VQ8_I_0
I:118 [SER] 0:1163 [G] Bt:121 [LEU] B5:1912 [G] ❌ 1VQ8_I_0
I:118 [SER] 0:1162 [G] Bt:121 [LEU] B5:1911 [G] ❌ 1VQ8_I_0
I:119 [TYR] 0:1185 [U] Bt:122 [ALA] B5:1934 [G] ❌ 1VQ8_I_0
I:123 [ASN] 0:1184 [C] Bt:127 [GLY] B5:1933 [C] ❌ 1VQ8_I_0
I:127 [GLU] 0:1183 [C] Bt:131 [GLU] B5:1932 [C] ❌ 1VQ8_I_0
I:130 [GLY] 0:1164 [U] Bt:134 [GLY] B5:1913 [U] ❌ 1VQ8_I_0
I:131 [THR] 0:1163 [G] Bt:135 [THR] B5:1912 [G] ❌ 1VQ8_I_0
I:134 [SER] 0:1164 [U] Bt:138 [SER] B5:1913 [U] ❌ 1VQ8_I_0
I:134 [SER] 0:1166 [A] Bt:138 [SER] B5:1915 [G] ❌ 1VQ8_I_0
I:135 [LEU] 0:1166 [A] Bt:139 [VAL] B5:1915 [G] ❌ 1VQ8_I_0
I:88 [GLY] 0:1169 [U] Bt:98 [ILE] B5:1918 [A] ❌ 1VQ8_I_0
I:117 [LEU] 0:1161 [A] Bt:120 [SER] B5:1910 [C] ❌ 7O7Y_Bt:120, 7O7Y_B5:1910 no longer at interface
I:87 [THR] 0:1170 [U] Bt:92 [ARG] B5:1919 [U] ❌ 1VQ8_0:1170 no longer at interface
I:117 [LEU] 0:1162 [G] Bt:120 [SER] B5:1911 [G] ❌ 7O7Y_Bt:120 no longer at interface
I:117 [LEU] 0:1185 [U] Bt:120 [SER] B5:1934 [G] ❌ 7O7Y_Bt:120 no longer at interface
I:117 [LEU] 0:1186 [C] Bt:120 [SER] B5:1935 [C] ❌ 7O7Y_Bt:120 no longer at interface
I:73 [PRO] 0:1164 [U] Bt:74 [VAL] B5:1913 [U] ❌ 7O7Y_Bt:74 no longer at interface
I:77 [GLU] 0:1167 [G] Bt:79 [ALA] B5:1916 [C] ❌ 7O7Y_Bt:79 no longer at interface
I:89 [SER] 0:1167 [G] Bt:99 [LYS] B5:1916 [C] ❌ 7O7Y_Bt:99 no longer at interface
I:89 [SER] 0:1168 [C] Bt:99 [LYS] B5:1917 [C] ❌ 7O7Y_Bt:99 no longer at interface
I:72 [VAL] 0:1164 [U] Bt:73 [VAL] B5:1913 [U] ❌ 7O7Y_Bt:73 no longer at interface
I:86 [GLU] 0:1168 [C] Bt:89 [PRO] B5:1917 [C] ❌ 7O7Y_Bt:89 no longer at interface
I:95 [ASP] 0:1168 [C] Bt:100 [HIS] B5:1917 [C] ❌ 1VQ8_I:95 no longer at interface
I:95 [ASP] 0:1167 [G] Bt:100 [HIS] B5:1916 [C] ❌ 1VQ8_I:95 no longer at interface
I:109 [ALA] 0:1163 [G] Bt:116 [MET] B5:1912 [G] ❌ 1VQ8_I:109 no longer at interface
I:120 [ASP] 0:1186 [C] Bt:123 [ARG] B5:1935 [C] ❌ 1VQ8_I:120 no longer at interface
I:120 [ASP] 0:1185 [U] Bt:123 [ARG] B5:1934 [G] ❌ 1VQ8_I:120 no longer at interface
I:120 [ASP] 0:1187 [U] Bt:123 [ARG] B5:1936 [U] ❌ 1VQ8_I:120 no longer at interface
I:133 [THR] 0:1181 [A] Bt:137 [GLN] B5:1930 [A] ❌ 1VQ8_I:133 no longer at interface
I:133 [THR] 0:1182 [C] Bt:137 [GLN] B5:1931 [U] ❌ 1VQ8_I:133 no longer at interface
I:133 [THR] 0:1192 [A] Bt:137 [GLN] B5:1941 [A] ❌ 1VQ8_I:133 no longer at interface
I:133 [THR] 0:1183 [C] Bt:137 [GLN] B5:1932 [C] ❌ 1VQ8_I:133 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L11, C-terminal domain 0.93 4.18 0.20 0.72 0.94 0.57 0.88 0.48 0.45 0.23 0.51


Other pairs involving 1VQ8_I_0 or 7O7Y_Bt_B5

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_I_0 1YHQ_I_0 0.98 1.0 0.46 1.0 Ribosomal protein L11, C-terminal domain Archaeal large subunit ribosomal RNA compare
1VQ8_I_0 7O7Y_Bt_B5 0.48 0.93 4.18 0.2 Ribosomal protein L11, C-terminal domain compare
1YHQ_I_0 7O7Y_Bt_B5 0.47 0.93 4.06 0.21 Ribosomal protein L11, C-terminal domain compare