Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
ChainChain (with hetatm)
Chainbow
Hydrophobicity Electrostatics (surface only) Conservation*
View
Focus on
InterfaceRNA
Protein
All
Show chains
Interface
show as licoriceshow Accessibility
Rim - Core
Contacts -
| 1WSU_A
|
1WSU_E
|
Distance
|
Base Pair
|
Hbond nuc:res
|
Base Stacking
|
Residue conservation
|
|---|---|---|---|---|---|---|
| A:595 [LEU] | E:23 [G] | 4.08 | 74.28 | |||
| A:595 [LEU] | E:24 [U] | 3.88 | 74.28 | |||
| A:596 [ALA] | E:22 [G] | 3.89 | E:25 [C] | 79.61 | ||
| A:596 [ALA] | E:23 [G] | 3.64 | 79.61 | |||
| A:599 [ARG] | E:20 [C] | 4.98 | E:28 [G] | 91.39 | ||
| A:599 [ARG] | E:21 [C] | 2.75 | E:27 [G] | 91.39 | ||
| A:599 [ARG] | E:22 [G] | 2.8 | E:25 [C] | 91.39 | ||
| A:604 [SER] | E:21 [C] | 4.07 | E:27 [G] | 75.25 | ||
| A:605 [SER] | E:20 [C] | 2.68 | E:28 [G] | 92.08 | ||
| A:605 [SER] | E:21 [C] | 3.54 | E:27 [G] | 92.08 | ||
| A:606 [ARG] | E:21 [C] | 3.04 | E:27 [G] | 99.0 | ||
| A:606 [ARG] | E:22 [G] | 2.95 | E:25 [C] | base/AA stacks | 99.0 | |
| A:606 [ARG] | E:23 [G] | 3.18 | sugar:SC | 99.0 | ||
| A:606 [ARG] | E:24 [U] | 2.72 | base:SC | 99.0 | ||
| A:607 [LYS] | E:19 [G] | 2.84 | E:29 [C] | 92.44 | ||
| A:607 [LYS] | E:20 [C] | 3.46 | E:28 [G] | 92.44 | ||
| A:607 [LYS] | E:21 [C] | 4.59 | E:27 [G] | 92.44 | ||
| A:608 [TYR] | E:20 [C] | 3.92 | E:28 [G] | 68.88 | ||
| A:610 [LEU] | E:23 [G] | 3.5 | 81.23 | |||
| A:610 [LEU] | E:24 [U] | 3.92 | 81.23 | |||
| A:614 [GLU] | E:23 [G] | 4.42 | 95.12 | |||
| A:624 [ARG] | E:23 [G] | 3.38 | base/AA stacks | 96.3 | ||
| A:627 [ASP] | E:23 [G] | 3.71 | 88.29 | |||
| A:629 [ARG] | E:23 [G] | 2.71 | base:SC, base:SC | 99.0 |
Export the table of contacts
*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)
Properties of this interface
| Interolog group ID | Structure ID |
Structure description |
UniProt ID |
ECOD label(s) |
RFAM label(s) |
Is ribosome? | RCSB PDB link |
|---|---|---|---|---|---|---|---|
| group37 | 1WSU_A_E | A: Selenocysteine-specific elongation factor, Moorella thermoacetica (genetically engineered) E: N/A | Q46455 | winged | ✘ |
|
Interologs
Total number of interologs for this interface: 2
| Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
|---|---|---|---|---|---|---|---|---|
| 1WSU_A_E | 2PJP_A_B | 0.92 | 0.81 | 1.3 | 0.46 | winged | compare | |
| 1WSU_A_E | 2UWM_A_C | 0.99 | 0.97 | 0.19 | 1.0 | winged | compare |