Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
| 1WSU_A
|
1WSU_E
|
2UWM_A
|
2UWM_C
|
Conserved?
|
|---|---|---|---|---|
| A:627 [ASP] | E:23 [G] | A:627 [ASP] | C:23 [G] | ✔ |
| A:596 [ALA] | E:22 [G] | A:596 [ALA] | C:22 [G] | ✔ |
| A:596 [ALA] | E:23 [G] | A:596 [ALA] | C:23 [G] | ✔ |
| A:604 [SER] | E:21 [C] | A:604 [SER] | C:21 [C] | ✔ |
| A:629 [ARG] | E:23 [G] | A:629 [ARG] | C:23 [G] | ✔ |
| A:607 [LYS] | E:19 [G] | A:607 [LYS] | C:19 [G] | ✔ |
| A:607 [LYS] | E:20 [C] | A:607 [LYS] | C:20 [C] | ✔ |
| A:607 [LYS] | E:21 [C] | A:607 [LYS] | C:21 [C] | ✔ |
| A:610 [LEU] | E:23 [G] | A:610 [LEU] | C:23 [G] | ✔ |
| A:610 [LEU] | E:24 [U] | A:610 [LEU] | C:24 [U] | ✔ |
| A:614 [GLU] | E:23 [G] | A:614 [GLU] | C:23 [G] | ✔ |
| A:605 [SER] | E:20 [C] | A:605 [SER] | C:20 [C] | ✔ |
| A:605 [SER] | E:21 [C] | A:605 [SER] | C:21 [C] | ✔ |
| A:599 [ARG] | E:20 [C] | A:599 [ARG] | C:20 [C] | ✔ |
| A:599 [ARG] | E:21 [C] | A:599 [ARG] | C:21 [C] | ✔ |
| A:599 [ARG] | E:22 [G] | A:599 [ARG] | C:22 [G] | ✔ |
| A:624 [ARG] | E:23 [G] | A:624 [ARG] | C:23 [G] | ✔ |
| A:595 [LEU] | E:23 [G] | A:595 [LEU] | C:23 [G] | ✔ |
| A:595 [LEU] | E:24 [U] | A:595 [LEU] | C:24 [U] | ✔ |
| A:608 [TYR] | E:20 [C] | A:608 [TYR] | C:20 [C] | ✔ |
| A:606 [ARG] | E:21 [C] | A:606 [ARG] | C:21 [C] | ✔ |
| A:606 [ARG] | E:22 [G] | A:606 [ARG] | C:22 [G] | ✔ |
| A:606 [ARG] | E:23 [G] | A:606 [ARG] | C:23 [G] | ✔ |
| A:606 [ARG] | E:24 [U] | A:606 [ARG] | C:24 [U] | ✔ |
| A:605 [SER] | E:19 [G] | A:605 [SER] | C:19 [G] | ❌ 1WSU_A_E |
| A:607 [LYS] | E:18 [U] | A:607 [LYS] | C:18 [U] | ❌ 1WSU_E:18 no longer at interface |
Export the table of contacts
Properties of this pair
|
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| winged | 0.97 | 0.19 | 1.00 | 0.96 | 0.62 | 1.0 | 1.0 | 0.99 | 0.98 | 1.00 | 0.50 |
Other pairs involving 1WSU_A_E or 2UWM_A_C
Total number of entries: 3
| Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
|---|---|---|---|---|---|---|---|---|
| 2PJP_A_B | 2UWM_A_C | 0.94 | 0.82 | 1.21 | 0.46 | winged | compare | |
| 1WSU_A_E | 2PJP_A_B | 0.92 | 0.81 | 1.3 | 0.46 | winged | compare | |
| 1WSU_A_E | 2UWM_A_C | 0.99 | 0.97 | 0.19 | 1.0 | winged | compare |