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All interfaces > All interologs > Interface groups > group39 > 2HVY_C_E

Interface analysis

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Protein

Cartoon
Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Interface

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Rim - Core

Contacts -

2HVY_C
2HVY_E
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
C:3 [PHE] E:30 [C] 4.74 31.15
C:31 [HIS] E:32 [U] 4.93 69.6
C:34 [ARG] E:19 [C] 2.79 E:39 [G] 75.36
C:34 [ARG] E:20 [G] 3.51 E:38 [C] 75.36
C:34 [ARG] E:32 [U] 4.61 75.36
C:34 [ARG] E:33 [G] 2.84 E:25 [A] 75.36
C:35 [PHE] E:19 [C] 3.84 E:39 [G] 70.28
C:36 [SER] E:19 [C] 2.87 E:39 [G] sugar:SC 95.2
C:36 [SER] E:20 [G] 3.18 E:38 [C] 95.2
C:37 [PRO] E:19 [C] 3.36 E:39 [G] 79.04
C:38 [GLU] E:19 [C] 3.24 E:39 [G] sugar:SC 55.54
C:38 [GLU] E:20 [G] 3.55 E:38 [C] 55.54
C:38 [GLU] E:39 [G] 4.65 E:19 [C] 55.54
C:40 [PRO] E:20 [G] 4.12 E:38 [C] 75.97
C:40 [PRO] E:21 [G] 4.36 E:37 [C] 75.97
C:41 [TYR] E:21 [G] 4.29 E:37 [C] 60.23

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group39 2HVY_C_E C: Ribosome biogenesis protein nop10, Pyrococcus furiosus (genetically engineered) E: H/aca RNA Q8U1R4 Nucleolar RNA-binding protein Nop10-like ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2HVY_C_E 3LWR_B_D 0.83 0.83 0.57 0.4 Nucleolar RNA-binding protein Nop10-like compare