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All interfaces > All interologs > Interface groups > group4 > 2ATW_A_B

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Licorice
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RNA

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Licorice
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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

2ATW_A
2ATW_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:199 [GLU] B:0 [A] 3.01 base:SC 97.51
A:217 [ARG] B:3 [A] 2.68 sugar:SC 89.56
A:217 [ARG] B:4 [C] 3.63 89.56
A:229 [LEU] B:0 [A] 4.26 67.75
A:230 [ASN] B:0 [A] 4.5 91.5
A:230 [ASN] B:1 [G] 2.68 base:SC 91.5
A:232 [LYS] B:1 [G] 3.45 76.5
A:232 [LYS] B:2 [A] 4.4 76.5
A:233 [GLY] B:0 [A] 3.3 sugar:BB 81.84
A:233 [GLY] B:1 [G] 3.86 81.84
A:234 [ALA] B:0 [A] 3.57 78.43
A:236 [ILE] B:0 [A] 3.9 82.93
A:236 [ILE] B:1 [G] 3.52 82.93
A:236 [ILE] B:2 [A] 3.47 82.93
A:237 [GLY] B:0 [A] 2.9 98.95
A:237 [GLY] B:1 [G] 4.08 98.95
A:238 [PRO] B:0 [A] 3.32 35.51
A:238 [PRO] B:1 [G] 3.47 35.51
A:239 [MET] B:0 [A] 3.95 59.25
A:239 [MET] B:1 [G] 2.59 59.25
A:239 [MET] B:2 [A] 4.68 59.25
A:240 [GLY] B:1 [G] 3.98 91.7
A:240 [GLY] B:2 [A] 4.15 91.7
A:242 [ARG] B:0 [A] 3.44 94.21
A:243 [VAL] B:2 [A] 3.85 86.31
A:244 [ARG] B:2 [A] 3.38 50.35
A:244 [ARG] B:3 [A] 4.61 50.35
A:247 [MET] B:2 [A] 3.8 47.37
A:254 [LYS] B:3 [A] 3.71 69.06
A:254 [LYS] B:4 [C] 3.51 69.06
A:255 [ILE] B:2 [A] 3.01 87.53
A:255 [ILE] B:3 [A] 3.27 87.53
A:256 [ASP] B:2 [A] 3.83 88.97
A:256 [ASP] B:3 [A] 2.53 sugar:SC 88.97
A:257 [ILE] B:2 [A] 2.84 base:BB, base:BB 75.37
A:257 [ILE] B:3 [A] 4.26 75.37
A:258 [ILE] B:3 [A] 4.5 82.42
A:273 [SER] B:3 [A] 2.79 base:SC 61.95
A:274 [PRO] B:3 [A] 3.6 86.73
A:274 [PRO] B:4 [C] 3.14 86.73
A:297 [PHE] B:5 [U] 2.89 base:BB 47.95
A:298 [GLN] B:5 [U] 3.88 64.38
A:299 [LEU] B:5 [U] 4.78 36.14
A:299 [LEU] B:7 [A] 3.41 36.14
A:300 [SER] B:5 [U] 3.49 64.79
A:300 [SER] B:6 [C] 2.92 64.79
A:300 [SER] B:7 [A] 2.52 base:SC, base:SC 64.79
A:301 [LEU] B:4 [C] 3.58 31.84
A:301 [LEU] B:5 [U] 3.24 31.84
A:303 [ILE] B:7 [A] 3.21 89.64
A:303 [ILE] B:8 [A] 3.45 89.64
A:304 [GLY] B:6 [C] 3.96 95.92
A:304 [GLY] B:7 [A] 3.62 95.92
A:305 [LYS] B:6 [C] 3.61 65.89
A:305 [LYS] B:7 [A] 3.53 65.89
A:306 [GLU] B:7 [A] 2.82 32.51
A:306 [GLU] B:8 [A] 3.83 32.51
A:307 [GLY] B:7 [A] 3.76 90.18
A:307 [GLY] B:8 [A] 3.35 90.18
A:307 [GLY] B:10 [A] 4.72 90.18
A:310 [ALA] B:8 [A] 3.72 84.32
A:310 [ALA] B:10 [A] 3.94 84.32
A:311 [ARG] B:8 [A] 4.58 64.27
A:311 [ARG] B:10 [A] 3.44 64.27
A:314 [ALA] B:10 [A] 3.66 79.75
A:315 [ARG] B:10 [A] 3.45 41.55
A:319 [TRP] B:10 [A] 4.34 31.05
A:320 [ARG] B:10 [A] 3.71 50.58
A:321 [ILE] B:8 [A] 3.3 87.85
A:321 [ILE] B:9 [U] 3.57 87.85
A:321 [ILE] B:10 [A] 2.84 base:BB, base:BB 87.85
A:322 [ASP] B:8 [A] 3.93 52.26
A:322 [ASP] B:9 [U] 2.99 base:SC 52.26
A:322 [ASP] B:10 [A] 4.95 52.26
A:323 [ILE] B:8 [A] 2.89 base:BB, base:BB 79.2

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group4 2ATW_A_B A: Transcription elongation protein nusa, Mycobacterium tuberculosis (genetically engineered) B: N/A P9WIV3 Prokaryotic type KH domain (KH-domain type II) ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2ASB_A_B 2ATW_A_B 0.98 0.98 0.29 0.91 Prokaryotic type KH domain (KH-domain type II) compare