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All interfaces > All interologs > Interface groups > group41 > 4RWN_A_B,C

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Licorice
Surface

RNA

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Licorice
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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

4RWN_A
4RWN_B,C
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:12 [ASP] C:35 [A] 3.34 B:4 [U] 81.39
A:12 [ASP] C:36 [G] 3.57 B:3 [C] 81.39
A:13 [LYS] C:35 [A] 4.66 B:4 [U] 20.55
A:13 [LYS] C:36 [G] 3.73 B:3 [C] 20.55
A:13 [LYS] C:37 [C] 2.98 B:2 [G] 20.55
A:16 [GLU] B:5 [U] 4.67 C:34 [A] 47.64
A:16 [GLU] C:35 [A] 2.59 B:4 [U] sugar:SC 47.64
A:16 [GLU] C:36 [G] 3.43 B:3 [C] 47.64
A:17 [ASP] C:36 [G] 4.94 B:3 [C] 33.01
A:20 [LEU] B:6 [U] 3.81 C:33 [A] 75.69
A:20 [LEU] C:35 [A] 4.96 B:4 [U] 75.69
A:21 [PRO] B:5 [U] 4.71 C:34 [A] 81.11
A:21 [PRO] B:6 [U] 3.15 C:33 [A] 81.11
A:21 [PRO] B:7 [U] 3.78 C:32 [A] 81.11
A:22 [ASN] B:6 [U] 4.22 C:33 [A] 57.64
A:23 [THR] B:5 [U] 3.44 C:34 [A] 45.82
A:23 [THR] B:6 [U] 2.81 C:33 [A] 45.82
A:26 [ARG] B:6 [U] 2.74 C:33 [A] 24.07
A:26 [ARG] B:7 [U] 3.68 C:32 [A] 24.07
A:27 [THR] C:26 [A] 4.71 B:13 [U] 22.09
A:30 [LYS] C:25 [A] 3.49 B:14 [U] 47.87
A:30 [LYS] C:26 [A] 3.09 B:13 [U] 47.87
A:31 [GLU] C:25 [A] 4.98 B:14 [U] 25.25
A:33 [ILE] C:24 [U] 3.6 B:15 [A] 78.58
A:33 [ILE] C:25 [A] 4.33 B:14 [U] 78.58
A:34 [ASP] C:24 [U] 3.95 B:15 [A] 58.59
A:34 [ASP] C:25 [A] 3.63 B:14 [U] 58.59
A:37 [CYS] C:24 [U] 3.61 B:15 [A] 50.63
A:41 [LYS] B:16 [U] 3.16 C:23 [A] base:SC 67.43
A:41 [LYS] B:17 [G] 3.49 C:22 [C] 67.43
A:41 [LYS] C:23 [A] 4.43 B:16 [U] 67.43
A:41 [LYS] C:24 [U] 3.52 B:15 [A] 67.43
A:42 [GLU] B:16 [U] 2.82 C:23 [A] sugar:SC 50.22
A:42 [GLU] B:17 [G] 4.83 C:22 [C] 50.22
A:53 [ARG] B:18 [A] 3.46 C:21 [U] 57.42
A:53 [ARG] B:19 [A] 3.38 C:20 [U] 57.42
A:54 [VAL] B:17 [G] 2.67 C:22 [C] sugar:BB 88.96
A:54 [VAL] B:18 [A] 3.21 C:21 [U] 88.96
A:55 [SER] B:17 [G] 2.96 C:22 [C] base:BB 45.24
A:55 [SER] B:18 [A] 3.43 C:21 [U] 45.24
A:55 [SER] C:22 [C] 4.24 B:17 [G] 45.24
A:55 [SER] C:23 [A] 4.91 B:16 [U] 45.24
A:56 [LYS] B:17 [G] 4.79 C:22 [C] 57.23
A:56 [LYS] C:22 [C] 4.02 B:17 [G] 57.23
A:56 [LYS] C:23 [A] 3.57 B:16 [U] 57.23
A:57 [VAL] C:23 [A] 2.65 B:16 [U] sugar:BB 83.38
A:57 [VAL] C:24 [U] 3.07 B:15 [A] 83.38
A:58 [VAL] C:23 [A] 3.8 B:16 [U] 77.59
A:58 [VAL] C:24 [U] 3.58 B:15 [A] 77.59
A:59 [LYS] C:23 [A] 4.38 B:16 [U] 87.47
A:59 [LYS] C:24 [U] 2.76 B:15 [A] 87.47
A:59 [LYS] C:25 [A] 2.73 B:14 [U] 87.47
A:63 [SER] B:8 [G] 4.68 C:31 [C] 68.91
A:64 [GLY] B:8 [G] 4.53 C:31 [C] 82.92
A:65 [LYS] B:7 [U] 4.37 C:32 [A] 93.04
A:65 [LYS] B:8 [G] 4.12 C:31 [C] 93.04
A:66 [GLY] B:7 [U] 3.66 C:32 [A] 86.39
A:66 [GLY] B:8 [G] 3.24 C:31 [C] 86.39
A:68 [THR] B:7 [U] 4.89 C:32 [A] 77.09
A:82 [THR] B:18 [A] 3.94 C:21 [U] 80.98
A:82 [THR] B:19 [A] 4.24 C:20 [U] 80.98
A:157 [GLN] B:18 [A] 3.61 C:21 [U] 37.96
A:157 [GLN] B:19 [A] 3.67 C:20 [U] 37.96
A:157 [GLN] C:21 [U] 2.71 B:18 [A] base:SC, sugar:SC 37.96
A:157 [GLN] C:22 [C] 3.54 B:17 [G] base/AA stacks 37.96
A:158 [TRP] C:22 [C] 3.98 B:17 [G] 10.63
A:160 [PRO] C:22 [C] 4.99 B:17 [G] 16.98
A:191 [GLU] C:22 [C] 4.55 B:17 [G] 66.95
A:191 [GLU] C:23 [A] 4.05 B:16 [U] 66.95
A:194 [ARG] C:23 [A] 4.18 B:16 [U] 70.95
A:194 [ARG] C:24 [U] 2.78 B:15 [A] 70.95
A:198 [ARG] B:7 [U] 4.49 C:32 [A] 55.64
A:198 [ARG] B:8 [G] 3.19 C:31 [C] 55.64
A:198 [ARG] B:9 [A] 3.74 C:30 [U] 55.64
A:198 [ARG] C:24 [U] 4.74 B:15 [A] 55.64
A:199 [ASN] B:8 [G] 3.75 C:31 [C] 35.46
A:199 [ASN] B:9 [A] 4.57 C:30 [U] 35.46
A:200 [ARG] B:7 [U] 4.49 C:32 [A] 54.68
A:201 [PRO] C:33 [A] 4.78 B:6 [U] 86.34
A:202 [THR] B:6 [U] 3.97 C:33 [A] 47.01
A:202 [THR] B:7 [U] 3.27 C:32 [A] base:SC 47.01
A:202 [THR] C:33 [A] 2.75 B:6 [U] base:SC 47.01
A:202 [THR] C:34 [A] 3.82 B:5 [U] 47.01
A:203 [LYS] C:34 [A] 3.59 B:5 [U] 69.37
A:203 [LYS] C:35 [A] 2.99 B:4 [U] 69.37
A:205 [LYS] B:7 [U] 2.94 C:32 [A] sugar:SC 87.26
A:205 [LYS] B:8 [G] 3.16 C:31 [C] 87.26
A:206 [SER] C:34 [A] 4.97 B:5 [U] 64.45
A:209 [ARG] B:6 [U] 3.97 C:33 [A] 90.83
A:209 [ARG] B:7 [U] 3.34 C:32 [A] 90.83
A:247 [THR] C:33 [A] 3.23 B:6 [U] 20.55
A:247 [THR] C:34 [A] 2.94 B:5 [U] 20.55
A:248 [ASP] C:34 [A] 3.6 B:5 [U] 46.78
A:248 [ASP] C:35 [A] 3.53 B:4 [U] 46.78

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group41 4RWN_A_B,C A: 2'-5'-oligoadenylate synthase 1, Sus scrofa (genetically engineered) B: Synthetic construct (synthetic) C: Synthetic construct (synthetic) Q29599 PAP/OAS1 substrate-binding domain & Nucleotidyltransferase ✘

Interologs

Total number of interologs for this interface: 2

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4RWN_A_B,C 4RWO_A_B,C 0.98 1.0 0.24 0.95 PAP/OAS1 substrate-binding domain & Nucleotidyltransferase compare
4RWN_A_B,C 4S3N_A_B,C 0.80 0.9 0.98 0.42 PAP/OAS1 substrate-binding domain & Nucleotidyltransferase compare