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All interfaces > All interologs > Interface groups > group42 > 4V9F_6_0 vs 6AZ3_R_1

Interface analysis


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Common contacts -

4V9F_6
4V9F_0
6AZ3_R
6AZ3_1
Conserved?
6:44 [ASN] 0:1224 [G] R:117 [ARG] 1:1357 [G] ✔
6:44 [ASN] 0:1225 [C] R:117 [ARG] 1:1358 [C] ✔
6:44 [ASN] 0:1250 [C] R:117 [ARG] 1:1383 [C] ✔
6:41 [SER] 0:1113 [G] R:114 [SER] 1:1244 [G] ✔
6:41 [SER] 0:1114 [A] R:114 [SER] 1:1245 [G] ✔
6:41 [SER] 0:1115 [U] R:114 [SER] 1:1246 [C] ✔
6:41 [SER] 0:1224 [G] R:114 [SER] 1:1357 [G] ✔
6:41 [SER] 0:1250 [C] R:114 [SER] 1:1383 [C] ✔
6:43 [HIS] 0:1141 [U] R:116 [HIS] 1:1274 [G] ✔
6:43 [HIS] 0:1142 [C] R:116 [HIS] 1:1275 [G] ✔
6:43 [HIS] 0:1223 [G] R:116 [HIS] 1:1356 [G] ✔
6:43 [HIS] 0:1224 [G] R:116 [HIS] 1:1357 [G] ✔
6:20 [GLU] 0:1142 [C] R:94 [LYS] 1:1275 [G] ✔
6:40 [GLY] 0:1250 [C] R:113 [ALA] 1:1383 [C] ✔
6:40 [GLY] 0:1251 [C] R:113 [ALA] 1:1384 [C] ✔
6:17 [GLN] 0:1142 [C] R:91 [ARG] 1:1275 [G] ✔
6:17 [GLN] 0:1143 [G] R:91 [ARG] 1:1276 [U] ✔
6:13 [ARG] 0:1222 [A] R:87 [CYS] 1:1355 [C] ✔
6:13 [ARG] 0:1223 [G] R:87 [CYS] 1:1356 [G] ✔
6:36 [TYR] 0:1251 [C] R:109 [TYR] 1:1384 [C] ✔
6:38 [ASP] 0:1113 [G] R:111 [ASP] 1:1244 [G] ✔
6:38 [ASP] 0:1114 [A] R:111 [ASP] 1:1245 [G] ✔
6:18 [GLN] 0:1142 [C] R:92 [MET] 1:1275 [G] ✔
6:18 [GLN] 0:1143 [G] R:92 [MET] 1:1276 [U] ✔
6:45 [LEU] 0:1250 [C] R:118 [ALA] 1:1383 [C] ✔
6:46 [LYS] 0:1251 [C] R:119 [ARG] 1:1384 [C] ✔
6:42 [GLN] 0:1114 [A] R:115 [ARG] 1:1245 [G] ✔
6:42 [GLN] 0:1115 [U] R:115 [ARG] 1:1246 [C] ✔
6:42 [GLN] 0:1140 [C] R:115 [ARG] 1:1273 [U] ✔
6:42 [GLN] 0:1141 [U] R:115 [ARG] 1:1274 [G] ✔
6:42 [GLN] 0:1223 [G] R:115 [ARG] 1:1356 [G] ✔
6:42 [GLN] 0:1224 [G] R:115 [ARG] 1:1357 [G] ✔
6:47 [ARG] 0:1252 [A] R:120 [TYR] 1:1385 [A] ✔
6:19 [PHE] 0:1142 [C] R:93 [VAL] 1:1275 [G] ✔
6:19 [PHE] 0:1143 [G] R:93 [VAL] 1:1276 [U] ✔
6:37 [SER] 0:1112 [G] R:110 [HIS] 1:1243 [G] ✔
6:37 [SER] 0:1113 [G] R:110 [HIS] 1:1244 [G] ✔
6:37 [SER] 0:1250 [C] R:110 [HIS] 1:1383 [C] ✔
6:37 [SER] 0:1251 [C] R:110 [HIS] 1:1384 [C] ✔
6:44 [ASN] 0:1251 [C] R:117 [ARG] 1:1384 [C] ❌ 6AZ3_R_1
6:41 [SER] 0:1251 [C] R:114 [SER] 1:1384 [C] ❌ 6AZ3_R_1
6:20 [GLU] 0:1143 [G] R:94 [LYS] 1:1276 [U] ❌ 6AZ3_R_1
6:17 [GLN] 0:1222 [A] R:91 [ARG] 1:1355 [C] ❌ 6AZ3_R_1
6:27 [ASN] 0:578 [C] R:99 [VAL] 1:546 [G] ❌ 6AZ3_R_1
6:45 [LEU] 0:1251 [C] R:118 [ALA] 1:1384 [C] ❌ 6AZ3_R_1
6:30 [VAL] 0:578 [C] R:103 [GLY] 1:546 [G] ❌ 6AZ3_R_1
6:30 [VAL] 0:1112 [G] R:103 [GLY] 1:1243 [G] ❌ 6AZ3_R_1
6:46 [LYS] 0:1252 [A] R:119 [ARG] 1:1385 [A] ❌ 6AZ3_R_1
6:47 [ARG] 0:1112 [G] R:120 [TYR] 1:1243 [G] ❌ 6AZ3_R_1
6:47 [ARG] 0:1251 [C] R:120 [TYR] 1:1384 [C] ❌ 6AZ3_R_1
6:37 [SER] 0:1114 [A] R:110 [HIS] 1:1245 [G] ❌ 4V9F_6_0
6:37 [SER] 0:1252 [A] R:110 [HIS] 1:1385 [A] ❌ 4V9F_6_0
6:40 [GLY] 0:1113 [G] R:113 [ALA] 1:1244 [G] ❌ 4V9F_6_0
6:44 [ASN] 0:1115 [U] R:117 [ARG] 1:1246 [C] ❌ 4V9F_6_0
6:44 [ASN] 0:1114 [A] R:117 [ARG] 1:1245 [G] ❌ 4V9F_6_0
6:46 [LYS] 0:1250 [C] R:119 [ARG] 1:1383 [C] ❌ 4V9F_6_0
6:18 [GLN] 0:1141 [U] R:92 [MET] 1:1274 [G] ❌ 4V9F_6_0
6:20 [GLU] 0:1141 [U] R:94 [LYS] 1:1274 [G] ❌ 4V9F_6_0
6:17 [GLN] 0:1221 [G] R:91 [ARG] 1:1354 [C] ❌ 6AZ3_1:1354 no longer at interface
6:44 [ASN] 0:1249 [U] R:117 [ARG] 1:1382 [C] ❌ 4V9F_0:1249 no longer at interface
6:17 [GLN] 0:1144 [A] R:91 [ARG] 1:1277 [G] ❌ 4V9F_0:1144 no longer at interface
6:39 [PHE] 0:1141 [U] R:112 [LEU] 1:1274 [G] ❌ 6AZ3_R:112 no longer at interface
6:39 [PHE] 0:1142 [C] R:112 [LEU] 1:1275 [G] ❌ 6AZ3_R:112 no longer at interface
6:12 [ALA] 0:1222 [A] R:83 [TYR] 1:1355 [C] ❌ 6AZ3_R:83 no longer at interface
6:21 [LYS] 0:1141 [U] R:95 [GLU] 1:1274 [G] ❌ 6AZ3_R:95 no longer at interface
6:21 [LYS] 0:1142 [C] R:95 [GLU] 1:1275 [G] ❌ 6AZ3_R:95 no longer at interface
6:34 [ARG] 0:578 [C] R:107 [GLN] 1:546 [G] ❌ 6AZ3_R:107 no longer at interface
6:34 [ARG] 0:1112 [G] R:107 [GLN] 1:1243 [G] ❌ 6AZ3_R:107 no longer at interface
6:34 [ARG] 0:1113 [G] R:107 [GLN] 1:1244 [G] ❌ 6AZ3_R:107 no longer at interface
6:33 [GLU] 0:578 [C] R:106 [SER] 1:546 [G] ❌ 6AZ3_R:106 no longer at interface
6:33 [GLU] 0:1112 [G] R:106 [SER] 1:1243 [G] ❌ 6AZ3_R:106 no longer at interface
6:33 [GLU] 0:1252 [A] R:106 [SER] 1:1385 [A] ❌ 6AZ3_R:106 no longer at interface
6:48 [THR] 0:1252 [A] R:121 [HIS] 1:1385 [A] ❌ 6AZ3_R:121 no longer at interface
6:10 [PHE] 0:1142 [C] R:81 [ALA] 1:1275 [G] ❌ 6AZ3_R:81 no longer at interface
6:11 [PRO] 0:1223 [G] R:82 [TYR] 1:1356 [G] ❌ 4V9F_6:11 no longer at interface
6:16 [PRO] 0:1142 [C] R:90 [THR] 1:1275 [G] ❌ 4V9F_6:16 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RplX-like 0.72 2.27 0.15 0.85 0.76 0.69 0.94 0.65 0.47 0.23 0.49


Other pairs involving 4V9F_6_0 or 6AZ3_R_1

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4V9F_6_0 7O7Y_BS_B5 0.61 0.93 2.87 0.12 RplX-like compare
4V9F_6_0 6AZ3_R_1 0.65 0.72 2.27 0.15 RplX-like compare
6AZ3_R_1 7O7Y_BS_B5 0.44 0.92 2.42 0.2 RplX-like Eukaryotic large subunit ribosomal RNA compare