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All interfaces > All interologs > Interface groups > group44 > 4Y4O_1I_1A vs 7K00_h_a

Interface analysis


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Common contacts -

4Y4O_1I
4Y4O_1A
7K00_h
7K00_a
Conserved?
1I:29 [TYR] 1A:2220 [A] h:29 [PHE] a:2198 [A] ✔
1I:23 [PRO] 1A:2115 [G] h:23 [ALA] a:2093 [G] ✔
1I:28 [ASN] 1A:2114 [U] h:28 [ASN] a:2092 [U] ✔
1I:28 [ASN] 1A:2220 [A] h:28 [ASN] a:2198 [A] ✔
1I:28 [ASN] 1A:2221 [A] h:28 [ASN] a:2199 [A] ✔
1I:28 [ASN] 1A:2237 [A] h:28 [ASN] a:2225 [A] ✔
1I:22 [LYS] 1A:2115 [G] h:22 [LYS] a:2093 [G] ✔
1I:22 [LYS] 1A:2116 [G] h:22 [LYS] a:2094 [A] ✔
1I:27 [ARG] 1A:2113 [U] h:27 [ARG] a:2091 [C] ✔
1I:27 [ARG] 1A:2114 [U] h:27 [ARG] a:2092 [U] ✔
1I:24 [GLY] 1A:2114 [U] h:24 [GLY] a:2092 [U] ✔
1I:24 [GLY] 1A:2115 [G] h:24 [GLY] a:2093 [G] ✔
1I:24 [GLY] 1A:2220 [A] h:24 [GLY] a:2198 [A] ✔
1I:25 [TYR] 1A:2115 [G] h:25 [TYR] a:2093 [G] ✔
1I:25 [TYR] 1A:2116 [G] h:25 [TYR] a:2094 [A] ✔
1I:25 [TYR] 1A:2220 [A] h:25 [TYR] a:2198 [A] ✔
1I:23 [PRO] 1A:2113 [U] h:23 [ALA] a:2091 [C] ❌ 7K00_h_a
1I:27 [ARG] 1A:2115 [G] h:27 [ARG] a:2093 [G] ❌ 4Y4O_1I_1A
1I:29 [TYR] 1A:2219 [U] h:29 [PHE] a:2197 [U] ❌ 4Y4O_1I_1A
1I:11 [ASN] 1A:2117 [C] h:11 [ASN] a:2095 [A] ❌ 4Y4O_1I:11, 4Y4O_1A:2117 no longer at interface
1I:11 [ASN] 1A:2118 [U] h:11 [ASN] a:2096 [C] ❌ 4Y4O_1I:11, 4Y4O_1A:2118 no longer at interface
1I:11 [ASN] 1A:2116 [G] h:11 [ASN] a:2094 [A] ❌ 4Y4O_1I:11 no longer at interface
1I:34 [GLY] 1A:2220 [A] h:33 [GLN] a:2198 [A] ❌ 4Y4O_1I:34 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L9 N-domain-like Bacterial large subunit ribosomal RNA 0.96 2.81 0.56 0.88 0.96 0.78 0.8 0.88 0.95 0.40 0.57


Other pairs involving 4Y4O_1I_1A or 7K00_h_a

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1I_1A 7K00_h_a 0.88 0.96 2.81 0.56 L9 N-domain-like Bacterial large subunit ribosomal RNA compare
7K00_h_a 7RYG_H_A 0.97 0.98 2.02 1.0 L9 N-domain-like Bacterial large subunit ribosomal RNA compare
4Y4O_1I_1A 7RYG_H_A 0.97 0.96 3.59 0.5 L9 N-domain-like Bacterial large subunit ribosomal RNA compare