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All interfaces > All interologs > Interface groups > group45 > 4Y4O_1O_1a vs 7K00_j_A

Interface analysis


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Common contacts -

4Y4O_1O
4Y4O_1a
7K00_j
7K00_A
Conserved?
1O:121 [VAL] 1a:346 [G] j:122 [VAL] A:346 [G] ✔
1O:119 [PRO] 1a:347 [G] j:120 [PRO] A:347 [G] ✔
1O:99 [PHE] 1a:339 [C] j:100 [PHE] A:339 [C] ✔
1O:47 [ILE] 1a:1422 [G] j:47 [ILE] A:1422 [G] ✔
1O:54 [GLU] 1a:1421 [G] j:54 [LYS] A:1421 [G] ✔
1O:97 [ARG] 1a:339 [C] j:98 [ARG] A:339 [C] ✔
1O:97 [ARG] 1a:340 [U] j:98 [ARG] A:340 [U] ✔
1O:49 [ARG] 1a:1422 [G] j:49 [ARG] A:1422 [G] ✔
1O:49 [ARG] 1a:1423 [G] j:49 [ARG] A:1423 [G] ✔
1O:13 [ASN] 1a:339 [C] j:13 [ASN] A:339 [C] ✔
1O:48 [PRO] 1a:1422 [G] j:48 [PRO] A:1422 [G] ✔
1O:48 [PRO] 1a:1423 [G] j:48 [PRO] A:1423 [G] ✔
1O:96 [THR] 1a:340 [U] j:97 [THR] A:340 [U] ✔
1O:13 [ASN] 1a:340 [U] j:13 [ASN] A:340 [U] ❌ 7K00_j_A
1O:96 [THR] 1a:339 [C] j:97 [THR] A:339 [C] ❌ 7K00_j_A
1O:99 [PHE] 1a:338 [A] j:100 [PHE] A:338 [A] ❌ 7K00_A:338 no longer at interface
1O:97 [ARG] 1a:338 [A] j:98 [ARG] A:338 [A] ❌ 7K00_A:338 no longer at interface
1O:116 [SER] 1a:345 [C] j:117 [SER] A:345 [C] ❌ 7K00_j:117, 7K00_A:345 no longer at interface
1O:107 [ARG] 1a:345 [C] j:108 [ARG] A:345 [C] ❌ 7K00_j:108, 7K00_A:345 no longer at interface
1O:17 [ARG] 1a:1471 [G] j:17 [ARG] A:1471 [U] ❌ 4Y4O_1O:17, 4Y4O_1a:1471 no longer at interface
1O:97 [ARG] 1a:341 [C] j:98 [ARG] A:341 [C] ❌ 4Y4O_1a:341 no longer at interface
1O:107 [ARG] 1a:346 [G] j:108 [ARG] A:346 [G] ❌ 7K00_j:108 no longer at interface
1O:120 [GLU] 1a:347 [G] j:121 [GLU] A:347 [G] ❌ 4Y4O_1O:120 no longer at interface
1O:120 [GLU] 1a:346 [G] j:121 [GLU] A:346 [G] ❌ 4Y4O_1O:120 no longer at interface
1O:46 [ALA] 1a:1422 [G] j:46 [ALA] A:1422 [G] ❌ 4Y4O_1O:46 no longer at interface
1O:53 [LYS] 1a:1421 [G] j:53 [LYS] A:1421 [G] ❌ 4Y4O_1O:53 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L14-related Bacterial small subunit ribosomal RNA 0.98 1.83 0.75 0.95 0.98 0.83 0.78 0.63 0.55 0.33 0.85


Other pairs involving 4Y4O_1O_1a or 7K00_j_A

Total number of entries: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1O_1a 6S0X_I_a 0.83 0.95 3.11 0.67 Ribosomal protein L14-related Bacterial small subunit ribosomal RNA compare
4Y4O_1O_1a 7K00_j_A 0.63 0.98 1.83 0.75 Ribosomal protein L14-related Bacterial small subunit ribosomal RNA compare
6S0X_I_a 7K00_j_A 0.52 0.95 3.11 0.44 Ribosomal protein L14-related Bacterial small subunit ribosomal RNA compare