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All interfaces > All interologs > Interface groups > group48 > 6AZ3_F_6

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Licorice
Surface

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

6AZ3_F
6AZ3_6
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
F:43 [ALA] 6:65 [C] 3.68 74.06
F:43 [ALA] 6:66 [A] 4.36 74.06
F:44 [GLY] 6:65 [C] 3.36 88.08
F:44 [GLY] 6:66 [A] 3.45 88.08
F:45 [ARG] 6:59 [C] 4.57 68.35
F:45 [ARG] 6:60 [A] 3.11 68.35
F:45 [ARG] 6:61 [U] 3.51 68.35
F:45 [ARG] 6:62 [G] 3.53 sugar:SC base/AA stacks 68.35
F:45 [ARG] 6:65 [C] 4.58 68.35
F:46 [PHE] 6:59 [C] 4.11 61.25
F:46 [PHE] 6:60 [A] 4.49 61.25
F:46 [PHE] 6:61 [U] 3.96 61.25
F:47 [ARG] 6:66 [A] 2.92 59.01
F:47 [ARG] 6:68 [A] 3.29 59.01
F:49 [ARG] 6:49 [C] 3.59 sugar:SC 78.5
F:62 [PRO] 6:64 [U] 3.67 65.18
F:69 [MET] 6:59 [C] 3.14 base:BB 45.42
F:69 [MET] 6:60 [A] 3.44 45.42
F:70 [LYS] 6:57 [U] 2.86 35.68
F:70 [LYS] 6:58 [U] 3.22 35.68
F:70 [LYS] 6:59 [C] 3.93 35.68
F:71 [TYR] 6:50 [A] 4.8 49.9
F:71 [TYR] 6:59 [C] 3.2 49.9
F:72 [ASN] 6:59 [C] 3.95 98.9
F:73 [GLY] 6:59 [C] 2.72 sugar:BB 76.29
F:74 [VAL] 6:59 [C] 4.79 92.44
F:75 [PRO] 6:60 [A] 3.85 96.68
F:75 [PRO] 6:61 [U] 5.0 96.68
F:77 [ARG] 6:61 [U] 3.88 79.59
F:77 [ARG] 6:62 [G] 4.27 79.59
F:77 [ARG] 6:63 [A] 3.4 79.59
F:77 [ARG] 6:64 [U] 3.51 79.59
F:77 [ARG] 6:65 [C] 3.98 79.59
F:78 [ARG] 6:63 [A] 4.09 96.38
F:78 [ARG] 6:64 [U] 2.48 base/AA stacks 96.38
F:79 [ILE] 6:64 [U] 4.17 84.18
F:80 [ASP] 6:64 [U] 3.59 74.05
F:83 [TYR] 6:65 [C] 3.3 66.81
F:104 [GLU] 6:64 [U] 4.74 21.12
F:105 [VAL] 6:63 [A] 4.26 42.42
F:146 [VAL] 6:60 [A] 3.47 3.61
F:146 [VAL] 6:61 [U] 3.88 3.61
F:147 [SER] 6:61 [U] 3.37 base:SC 58.91
F:150 [ARG] 6:60 [A] 3.78 69.09
F:150 [ARG] 6:61 [U] 4.26 69.09
F:151 [ALA] 6:60 [A] 3.67 45.75
F:154 [GLN] 6:60 [A] 3.57 92.57
F:166 [LYS] 6:55 [U] 3.55 sugar:SC 52.7
F:172 [LYS] 6:55 [U] 4.76 47.89
F:173 [GLU] 6:53 [U] 3.65 sugar:SC 2.02
F:179 [ARG] 6:49 [C] 3.02 sugar:BB 50.72
F:179 [ARG] 6:50 [A] 3.11 50.72
F:179 [ARG] 6:56 [A] 3.06 base/AA stacks 50.72
F:180 [SER] 6:49 [C] 3.0 76.28
F:181 [VAL] 6:48 [C] 2.88 sugar:BB 44.2
F:181 [VAL] 6:49 [C] 3.03 44.2
F:182 [PHE] 6:48 [C] 4.76 90.95
F:183 [THR] 6:48 [C] 3.31 75.18
F:184 [VAL] 6:11 [G] 4.65 6:46 [C] 87.65
F:185 [LYS] 6:47 [G] 3.5 57.05
F:185 [LYS] 6:48 [C] 3.36 57.05
F:186 [PRO] 6:11 [G] 3.47 6:46 [C] 46.23
F:186 [PRO] 6:47 [G] 3.92 46.23

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group48 6AZ3_F_6 F: Ribosomal protein el6, Leishmania donovani (natural) 6: rRNA zeta, Leishmania donovani (natural) SH3 ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_F_6 7O7Y_BE_B5 0.58 0.78 1.58 0.35 SH3 compare