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All interfaces > All interologs > Interface groups > group48 > 7O7Y_BE_B5

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Licorice
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RNA

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Licorice
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Conservation*

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Rim - Core

Contacts -

7O7Y_BE
7O7Y_B5
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BE:40 [LYS] B5:882 [U] 4.67 B5:1218 [A] 69.02
BE:40 [LYS] B5:883 [C] 3.43 B5:1217 [G] 69.02
BE:40 [LYS] B5:884 [U] 3.31 B5:986 [C] 69.02
BE:40 [LYS] B5:885 [C] 2.8 B5:985 [G] 69.02
BE:41 [LYS] B5:882 [U] 4.49 B5:1218 [A] 16.17
BE:41 [LYS] B5:883 [C] 4.67 B5:1217 [G] 16.17
BE:42 [GLY] B5:882 [U] 3.35 B5:1218 [A] sugar:BB 38.34
BE:42 [GLY] B5:883 [C] 3.97 B5:1217 [G] 38.34
BE:43 [LYS] B5:881 [C] 4.88 B5:1219 [G] 20.27
BE:43 [LYS] B5:882 [U] 3.48 B5:1218 [A] 20.27
BE:43 [LYS] B5:980 [G] 4.46 B5:890 [C] 20.27
BE:43 [LYS] B5:981 [G] 5.0 B5:889 [C] 20.27
BE:44 [PRO] B5:881 [C] 3.88 B5:1219 [G] 51.69
BE:44 [PRO] B5:882 [U] 4.55 B5:1218 [A] 51.69
BE:45 [HIS] B5:881 [C] 3.22 B5:1219 [G] 35.84
BE:45 [HIS] B5:882 [U] 3.21 B5:1218 [A] 35.84
BE:45 [HIS] B5:886 [C] 4.6 B5:984 [G] 35.84
BE:45 [HIS] B5:983 [G] 3.53 B5:887 [C] base/AA stacks 35.84
BE:45 [HIS] B5:984 [G] 3.38 B5:886 [C] base:SC 35.84
BE:45 [HIS] B5:985 [G] 4.47 B5:885 [C] 35.84
BE:46 [CYS] B5:880 [G] 4.93 B5:1220 [C] 1.28
BE:46 [CYS] B5:881 [C] 3.85 B5:1219 [G] 1.28
BE:46 [CYS] B5:982 [G] 3.37 B5:888 [C] 1.28
BE:46 [CYS] B5:983 [G] 3.65 B5:887 [C] 1.28
BE:47 [SER] B5:880 [G] 3.29 B5:1220 [C] 22.09
BE:47 [SER] B5:881 [C] 3.72 B5:1219 [G] 22.09
BE:47 [SER] B5:983 [G] 4.73 B5:887 [C] 22.09
BE:47 [SER] B5:984 [G] 4.39 B5:886 [C] 22.09
BE:48 [ARG] B5:880 [G] 3.99 B5:1220 [C] 49.24
BE:48 [ARG] B5:881 [C] 2.95 B5:1219 [G] 49.24
BE:48 [ARG] B5:882 [U] 2.93 B5:1218 [A] 49.24
BE:48 [ARG] B5:884 [U] 3.61 B5:986 [C] base:SC 49.24
BE:48 [ARG] B5:885 [C] 4.44 B5:985 [G] 49.24
BE:48 [ARG] B5:984 [G] 4.44 B5:886 [C] 49.24
BE:48 [ARG] B5:985 [G] 2.64 B5:885 [C] base:SC, base:SC 49.24
BE:48 [ARG] B5:986 [C] 3.52 B5:884 [U] 49.24
BE:49 [ASN] B5:879 [C] 4.06 B5:1221 [G] 72.11
BE:49 [ASN] B5:880 [G] 3.6 B5:1220 [C] 72.11
BE:49 [ASN] B5:881 [C] 4.81 B5:1219 [G] 72.11
BE:50 [PRO] B5:984 [G] 4.27 B5:886 [C] 33.15
BE:53 [VAL] B5:847 [C] 3.85 B5:715 [G] 30.01
BE:53 [VAL] B5:848 [C] 4.93 B5:714 [G] 30.01
BE:54 [ARG] B5:708 [G] 4.65 B5:854 [C] 27.79
BE:54 [ARG] B5:848 [C] 4.69 B5:714 [G] 27.79
BE:54 [ARG] B5:1224 [C] 2.68 base:BB, sugar:SC base/AA stacks 27.79
BE:55 [GLY] B5:878 [G] 4.16 B5:1222 [C] 76.8
BE:55 [GLY] B5:1224 [C] 4.08 76.8
BE:58 [ARG] B5:1122 [C] 3.43 B5:990 [G] 66.69
BE:59 [TYR] B5:985 [G] 4.72 B5:885 [C] 20.72
BE:60 [SER] B5:1123 [C] 3.14 B5:989 [G] 70.91
BE:60 [SER] B5:1124 [A] 2.87 70.91
BE:61 [ARG] B5:878 [G] 3.64 B5:1222 [C] 43.35
BE:61 [ARG] B5:879 [C] 3.05 B5:1221 [G] 43.35
BE:61 [ARG] B5:1124 [A] 3.53 base/AA stacks 43.35
BE:62 [SER] B5:1123 [C] 3.62 B5:989 [G] 60.68
BE:62 [SER] B5:1124 [A] 2.45 60.68
BE:62 [SER] B5:1125 [C] 3.49 B5:988 [G] 60.68
BE:63 [ALA] B5:1123 [C] 4.74 B5:989 [G] 36.63
BE:63 [ALA] B5:1124 [A] 4.65 36.63
BE:64 [MET] B5:880 [G] 3.3 B5:1220 [C] 52.93
BE:64 [MET] B5:881 [C] 4.19 B5:1219 [G] 52.93
BE:65 [TYR] B5:1126 [G] 2.85 B5:987 [C] sugar:SC base/AA stacks 32.19
BE:66 [SER] B5:986 [C] 3.8 B5:884 [U] 26.0
BE:66 [SER] B5:987 [C] 3.72 B5:1126 [G] 26.0
BE:66 [SER] B5:988 [G] 4.29 B5:1125 [C] 26.0
BE:66 [SER] B5:1125 [C] 3.61 B5:988 [G] 26.0
BE:66 [SER] B5:1126 [G] 2.69 B5:987 [C] base:SC 26.0
BE:67 [ARG] B5:984 [G] 3.8 B5:886 [C] 54.85
BE:67 [ARG] B5:985 [G] 2.57 B5:885 [C] 54.85
BE:67 [ARG] B5:986 [C] 3.11 B5:884 [U] base:BB 54.85
BE:68 [LYS] B5:880 [G] 4.08 B5:1220 [C] 56.15
BE:68 [LYS] B5:881 [C] 3.18 B5:1219 [G] 56.15
BE:68 [LYS] B5:884 [U] 4.37 B5:986 [C] 56.15
BE:68 [LYS] B5:986 [C] 3.33 B5:884 [U] 56.15
BE:69 [ALA] B5:884 [U] 4.95 B5:986 [C] 41.37
BE:69 [ALA] B5:986 [C] 3.44 B5:884 [U] 41.37
BE:71 [TYR] B5:986 [C] 3.42 B5:884 [U] sugar:SC 0.0
BE:71 [TYR] B5:987 [C] 3.1 B5:1126 [G] base/AA stacks 0.0
BE:71 [TYR] B5:1126 [G] 3.52 B5:987 [C] base/AA stacks 0.0
BE:72 [LYS] B5:884 [U] 3.23 B5:986 [C] base:SC 42.31
BE:72 [LYS] B5:986 [C] 2.66 B5:884 [U] sugar:SC 42.31
BE:73 [ARG] B5:882 [U] 3.41 B5:1218 [A] 50.81
BE:73 [ARG] B5:883 [C] 2.97 B5:1217 [G] 50.81
BE:73 [ARG] B5:884 [U] 3.47 B5:986 [C] base/AA stacks 50.81
BE:73 [ARG] B5:986 [C] 4.94 B5:884 [U] 50.81
BE:74 [LYS] B5:1127 [G] 4.08 B5:1212 [C] 41.14
BE:75 [TYR] B5:883 [C] 3.23 B5:1217 [G] base/AA stacks 1.28
BE:75 [TYR] B5:884 [U] 2.57 B5:986 [C] 1.28
BE:75 [TYR] B5:1217 [G] 3.75 B5:883 [C] base/AA stacks 1.28
BE:76 [ALA] B5:1217 [G] 4.15 B5:883 [C] 3.52
BE:77 [ALA] B5:1217 [G] 3.57 B5:883 [C] 10.03
BE:78 [PRO] B5:1217 [G] 4.13 B5:883 [C] 3.41
BE:79 [LYS] B5:1213 [G] 3.13 6.93
BE:79 [LYS] B5:1214 [A] 4.28 B5:2054 [G] 6.93
BE:81 [ARG] B5:1216 [C] 3.38 37.97
BE:81 [ARG] B5:1395 [U] 4.51 B5:2053 [A] 37.97
BE:84 [ARG] B5:1214 [A] 4.62 B5:2054 [G] 39.3
BE:84 [ARG] B5:1216 [C] 3.39 base/AA stacks 39.3
BE:84 [ARG] B5:1217 [G] 4.39 B5:883 [C] 39.3
BE:85 [LYS] B5:865 [G] 3.22 37.95
BE:85 [LYS] B5:866 [A] 3.52 37.95
BE:85 [LYS] B5:867 [C] 4.56 37.95
BE:86 [LYS] B5:1218 [A] 2.83 B5:882 [U] 13.07
BE:86 [LYS] B5:1219 [G] 3.26 B5:881 [C] 13.07
BE:88 [ARG] B5:863 [G] 2.87 sugar:SC 18.35
BE:88 [ARG] B5:864 [A] 3.15 18.35
BE:88 [ARG] B5:868 [C] 3.5 B5:2035 [G] 18.35
BE:88 [ARG] B5:869 [U] 4.44 B5:2034 [A] 18.35
BE:88 [ARG] B5:870 [G] 4.56 B5:862 [C] 18.35
BE:90 [LYS] B5:868 [C] 4.02 B5:2035 [G] 46.89
BE:90 [LYS] B5:869 [U] 4.0 B5:2034 [A] 46.89
BE:90 [LYS] B5:2101 [C] 4.08 46.89
BE:91 [VAL] B5:869 [U] 4.48 B5:2034 [A] 5.0
BE:91 [VAL] B5:870 [G] 3.99 B5:862 [C] 5.0
BE:91 [VAL] B5:871 [U] 4.49 B5:861 [G] 5.0
BE:91 [VAL] B5:2101 [C] 3.13 base:BB 5.0
BE:92 [LEU] B5:2101 [C] 3.84 7.71
BE:93 [ALA] B5:2101 [C] 3.08 base:BB 21.17
BE:93 [ALA] B5:2102 [G] 3.41 21.17
BE:94 [THR] B5:2101 [C] 2.28 base:BB, base:SC 26.28
BE:94 [THR] B5:2102 [G] 4.15 26.28
BE:95 [VAL] B5:2101 [C] 4.85 51.02
BE:97 [LYS] B5:681 [U] 3.25 65.27
BE:97 [LYS] B5:682 [U] 3.54 B5:468 [U] 65.27
BE:98 [PRO] B5:681 [U] 3.14 sugar:BB 33.73
BE:99 [VAL] B5:681 [U] 3.59 56.95
BE:99 [VAL] B5:682 [U] 3.69 B5:468 [U] 56.95
BE:100 [GLY] B5:679 [C] 4.47 45.15
BE:100 [GLY] B5:680 [A] 3.35 45.15
BE:100 [GLY] B5:681 [U] 2.58 45.15
BE:101 [GLY] B5:679 [C] 3.57 47.32
BE:101 [GLY] B5:680 [A] 4.86 47.32
BE:102 [ASP] B5:679 [C] 4.3 18.82
BE:103 [LYS] B5:677 [C] 3.5 B5:471 [A] 64.95
BE:103 [LYS] B5:678 [G] 2.62 B5:470 [A] sugar:BB 64.95
BE:103 [LYS] B5:679 [C] 3.74 64.95
BE:104 [ASN] B5:469 [C] 3.22 base:SC 70.49
BE:104 [ASN] B5:470 [A] 3.12 B5:678 [G] 70.49
BE:104 [ASN] B5:678 [G] 3.14 B5:470 [A] sugar:BB 70.49
BE:104 [ASN] B5:679 [C] 3.21 70.49
BE:104 [ASN] B5:680 [A] 3.07 sugar:SC 70.49
BE:105 [GLY] B5:470 [A] 4.58 B5:678 [G] 45.42
BE:105 [GLY] B5:678 [G] 4.78 B5:470 [A] 45.42
BE:108 [ARG] B5:469 [C] 2.94 base:SC, base:SC, base:SC 68.92
BE:108 [ARG] B5:470 [A] 3.24 B5:678 [G] base/AA stacks 68.92
BE:108 [ARG] B5:678 [G] 4.2 B5:470 [A] 68.92
BE:108 [ARG] B5:682 [U] 3.64 B5:468 [U] 68.92
BE:109 [VAL] B5:2101 [C] 4.11 2.23
BE:109 [VAL] B5:2102 [G] 4.91 2.23
BE:110 [VAL] B5:682 [U] 3.7 B5:468 [U] 57.99
BE:110 [VAL] B5:683 [U] 3.48 B5:466 [A] 57.99
BE:111 [LYS] B5:683 [U] 4.47 B5:466 [A] 11.23
BE:111 [LYS] B5:2102 [G] 2.88 11.23
BE:111 [LYS] B5:2103 [C] 3.37 11.23
BE:112 [LEU] B5:459 [C] 3.66 B5:691 [G] 23.07
BE:112 [LEU] B5:460 [C] 4.87 B5:689 [G] 23.07
BE:113 [ARG] B5:458 [C] 4.18 B5:692 [G] 29.33
BE:113 [ARG] B5:459 [C] 3.98 B5:691 [G] 29.33
BE:114 [LYS] B5:458 [C] 3.74 B5:692 [G] 53.93
BE:114 [LYS] B5:459 [C] 3.35 B5:691 [G] 53.93
BE:114 [LYS] B5:683 [U] 3.73 B5:466 [A] 53.93
BE:114 [LYS] B5:684 [C] 2.39 B5:465 [G] 53.93
BE:115 [MET] B5:458 [C] 3.97 B5:692 [G] 31.76
BE:115 [MET] B5:2104 [G] 3.53 B5:2100 [C] 31.76
BE:115 [MET] B5:2105 [G] 3.76 B5:2032 [G] 31.76
BE:116 [PRO] B5:457 [G] 3.56 B5:693 [C] 49.55
BE:116 [PRO] B5:458 [C] 3.73 B5:692 [G] 49.55
BE:117 [ARG] B5:457 [G] 3.75 B5:693 [C] 56.83
BE:117 [ARG] B5:458 [C] 2.53 B5:692 [G] 56.83
BE:117 [ARG] B5:459 [C] 4.78 B5:691 [G] 56.83
BE:117 [ARG] B5:685 [C] 3.75 B5:464 [G] 56.83
BE:118 [TYR] B5:456 [C] 3.43 B5:694 [G] 10.25
BE:118 [TYR] B5:457 [G] 3.56 B5:693 [C] 10.25
BE:119 [TYR] B5:2105 [G] 4.38 B5:2032 [G] 59.74
BE:120 [PRO] B5:456 [C] 4.51 B5:694 [G] 67.86
BE:123 [ASP] B5:2106 [A] 4.15 33.91
BE:124 [VAL] B5:695 [G] 3.34 B5:455 [C] 14.13
BE:124 [VAL] B5:696 [U] 3.77 B5:454 [U] 14.13
BE:125 [PRO] B5:858 [G] 4.04 24.74
BE:125 [PRO] B5:859 [G] 3.44 24.74
BE:125 [PRO] B5:2106 [A] 4.41 24.74
BE:126 [ARG] B5:858 [G] 2.76 sugar:BB 34.78
BE:126 [ARG] B5:859 [G] 2.9 base:BB base/AA stacks 34.78
BE:126 [ARG] B5:872 [G] 2.96 base/AA stacks 34.78
BE:127 [LYS] B5:696 [U] 3.94 B5:454 [U] 45.69
BE:127 [LYS] B5:858 [G] 3.36 45.69
BE:127 [LYS] B5:859 [G] 4.46 45.69
BE:128 [LEU] B5:857 [G] 3.72 44.7
BE:128 [LEU] B5:858 [G] 3.08 base:BB, base:BB 44.7
BE:128 [LEU] B5:859 [G] 3.99 44.7
BE:128 [LEU] B5:860 [A] 3.6 44.7
BE:128 [LEU] B5:1227 [G] 4.6 44.7
BE:128 [LEU] B5:1229 [U] 4.55 B5:705 [A] 44.7
BE:129 [LEU] B5:860 [A] 2.66 base:BB, base:BB 0.31
BE:129 [LEU] B5:873 [U] 4.42 0.31
BE:129 [LEU] B5:874 [C] 3.39 B5:1226 [G] 0.31
BE:129 [LEU] B5:1226 [G] 3.64 B5:874 [C] 0.31
BE:129 [LEU] B5:1227 [G] 4.37 0.31
BE:130 [SER] B5:860 [A] 4.8 23.54
BE:130 [SER] B5:874 [C] 3.29 B5:1226 [G] 23.54
BE:130 [SER] B5:1228 [G] 4.28 B5:706 [C] 23.54
BE:130 [SER] B5:1229 [U] 3.65 B5:705 [A] 23.54
BE:131 [HIS] B5:707 [C] 4.18 B5:855 [G] 48.04
BE:131 [HIS] B5:874 [C] 4.22 B5:1226 [G] 48.04
BE:131 [HIS] B5:875 [G] 4.89 48.04
BE:131 [HIS] B5:1225 [G] 3.07 B5:876 [C] base/AA stacks 48.04
BE:131 [HIS] B5:1226 [G] 3.03 B5:874 [C] 48.04
BE:132 [GLY] B5:706 [C] 4.74 B5:1228 [G] 19.77
BE:132 [GLY] B5:707 [C] 3.14 B5:855 [G] sugar:BB 19.77
BE:132 [GLY] B5:1225 [G] 4.7 B5:876 [C] 19.77
BE:132 [GLY] B5:1228 [G] 4.77 B5:706 [C] 19.77
BE:133 [LYS] B5:707 [C] 2.77 B5:855 [G] base:SC 45.32
BE:133 [LYS] B5:708 [G] 3.61 B5:854 [C] sugar:SC 45.32
BE:133 [LYS] B5:855 [G] 3.36 B5:707 [C] base:SC 45.32
BE:133 [LYS] B5:1228 [G] 2.9 B5:706 [C] 45.32
BE:133 [LYS] B5:1229 [U] 3.51 B5:705 [A] 45.32
BE:133 [LYS] B5:1231 [G] 4.91 45.32
BE:134 [LYS] B5:706 [C] 4.98 B5:1228 [G] 43.86
BE:134 [LYS] B5:1222 [C] 4.82 B5:878 [G] 43.86
BE:134 [LYS] B5:1223 [A] 2.34 B5:877 [C] 43.86
BE:134 [LYS] B5:1229 [U] 4.42 B5:705 [A] 43.86
BE:134 [LYS] B5:1230 [C] 4.24 B5:704 [G] 43.86
BE:135 [PRO] B5:1230 [C] 3.8 B5:704 [G] 24.77
BE:135 [PRO] B5:1231 [G] 3.6 24.77
BE:135 [PRO] B5:1232 [G] 3.24 B5:703 [C] 24.77
BE:136 [PHE] B5:704 [G] 3.57 B5:1230 [C] 4.86
BE:136 [PHE] B5:705 [A] 3.6 B5:1229 [U] 4.86
BE:136 [PHE] B5:1230 [C] 2.91 B5:704 [G] sugar:BB 4.86
BE:136 [PHE] B5:1232 [G] 3.22 B5:703 [C] 4.86
BE:137 [SER] B5:1230 [C] 4.69 B5:704 [G] 41.14
BE:137 [SER] B5:1231 [G] 4.33 41.14
BE:137 [SER] B5:1232 [G] 2.74 B5:703 [C] 41.14
BE:138 [GLN] B5:1231 [G] 3.28 0.36
BE:138 [GLN] B5:1232 [G] 4.84 B5:703 [C] 0.36
BE:139 [HIS] B5:705 [A] 2.83 B5:1229 [U] sugar:SC 67.2
BE:139 [HIS] B5:706 [C] 3.4 B5:1228 [G] base/AA stacks 67.2
BE:139 [HIS] B5:1230 [C] 4.61 B5:704 [G] 67.2
BE:140 [VAL] B5:705 [A] 4.39 B5:1229 [U] 44.88
BE:140 [VAL] B5:706 [C] 3.52 B5:1228 [G] 44.88
BE:140 [VAL] B5:707 [C] 4.99 B5:855 [G] 44.88
BE:141 [ARG] B5:705 [A] 3.95 B5:1229 [U] sugar:SC 64.62
BE:142 [LYS] B5:705 [A] 4.64 B5:1229 [U] 60.69
BE:142 [LYS] B5:706 [C] 2.45 B5:1228 [G] 60.69
BE:142 [LYS] B5:707 [C] 4.8 B5:855 [G] 60.69
BE:142 [LYS] B5:850 [G] 4.81 B5:712 [C] 60.69
BE:157 [THR] B5:4681 [C] 3.78 87.91
BE:157 [THR] B5:4682 [A] 3.4 87.91
BE:158 [GLY] B5:4681 [C] 3.85 90.82
BE:158 [GLY] B5:4682 [A] 2.53 90.82
BE:159 [ARG] B5:4678 [C] 3.48 base/AA stacks 78.38
BE:159 [ARG] B5:4679 [C] 2.31 78.38
BE:159 [ARG] B5:4681 [C] 4.39 78.38
BE:160 [HIS] B5:4677 [A] 4.41 82.75
BE:160 [HIS] B5:4678 [C] 2.79 82.75
BE:161 [ARG] B5:4682 [A] 4.19 77.93
BE:161 [ARG] B5:4684 [G] 2.78 sugar:SC 77.93
BE:175 [LEU] B5:4680 [G] 3.79 76.84
BE:182 [LEU] B5:4675 [G] 5.0 B5:4622 [C] 60.39
BE:182 [LEU] B5:4677 [A] 3.36 60.39
BE:183 [SER] B5:4622 [C] 4.09 B5:4675 [G] 62.47
BE:183 [SER] B5:4623 [G] 4.84 B5:4674 [C] 62.47
BE:183 [SER] B5:4673 [A] 4.52 B5:4624 [U] 62.47
BE:183 [SER] B5:4674 [C] 2.84 B5:4623 [G] base:BB 62.47
BE:183 [SER] B5:4675 [G] 4.17 B5:4622 [C] 62.47
BE:184 [LEU] B5:4622 [C] 2.47 B5:4675 [G] base:BB 65.06
BE:184 [LEU] B5:4675 [G] 4.62 B5:4622 [C] 65.06
BE:185 [ASN] B5:4622 [C] 3.86 B5:4675 [G] 99.0
BE:186 [ARG] B5:4622 [C] 4.62 B5:4675 [G] 81.23
BE:186 [ARG] B5:4675 [G] 3.33 B5:4622 [C] base/AA stacks 81.23
BE:186 [ARG] B5:4676 [C] 3.35 81.23
BE:186 [ARG] B5:4677 [A] 2.81 81.23
BE:188 [PRO] B5:4677 [A] 3.42 96.63
BE:188 [PRO] B5:4678 [C] 4.38 96.63
BE:190 [ARG] B5:4678 [C] 2.89 93.53
BE:190 [ARG] B5:4679 [C] 2.81 93.53
BE:190 [ARG] B5:4680 [G] 3.47 93.53
BE:190 [ARG] B5:4681 [C] 2.73 93.53
BE:191 [ARG] B5:4679 [C] 4.86 98.78
BE:191 [ARG] B5:4680 [G] 2.58 98.78
BE:192 [THR] B5:4680 [G] 3.86 85.65
BE:193 [HIS] B5:704 [G] 2.87 B5:1230 [C] sugar:SC 84.53
BE:193 [HIS] B5:705 [A] 3.79 B5:1229 [U] 84.53
BE:193 [HIS] B5:4680 [G] 3.75 84.53
BE:195 [LYS] B5:704 [G] 3.96 B5:1230 [C] 69.68
BE:195 [LYS] B5:705 [A] 3.11 B5:1229 [U] 69.68
BE:196 [PHE] B5:703 [C] 3.77 B5:1232 [G] 76.78
BE:196 [PHE] B5:704 [G] 3.76 B5:1230 [C] 76.78
BE:196 [PHE] B5:4680 [G] 3.53 76.78
BE:220 [PHE] B5:4679 [C] 2.7 sugar:BB 90.45
BE:220 [PHE] B5:4680 [G] 3.38 90.45
BE:221 [LYS] B5:1233 [C] 3.41 B5:702 [G] 52.21
BE:221 [LYS] B5:1234 [G] 4.42 B5:701 [C] 52.21
BE:221 [LYS] B5:4679 [C] 3.98 52.21
BE:222 [LYS] B5:1234 [G] 2.91 B5:701 [C] 72.14
BE:222 [LYS] B5:1235 [G] 2.59 B5:700 [C] 72.14
BE:222 [LYS] B5:4678 [C] 4.32 72.14
BE:222 [LYS] B5:4679 [C] 2.9 72.14
BE:222 [LYS] B5:4680 [G] 3.18 72.14
BE:222 [LYS] B5:4681 [C] 4.15 72.14
BE:223 [LYS] B5:4679 [C] 3.68 base:BB, base:BB 3.55
BE:225 [LEU] B5:4679 [C] 3.84 11.34
BE:226 [ARG] B5:690 [C] 3.18 32.23
BE:227 [LYS] B5:452 [A] 4.66 62.69
BE:242 [LYS] B5:4676 [C] 3.23 46.35
BE:243 [TYR] B5:4677 [A] 4.12 39.75
BE:243 [TYR] B5:4678 [C] 3.5 39.75
BE:243 [TYR] B5:4679 [C] 3.36 base/AA stacks 39.75
BE:245 [ILE] B5:4676 [C] 4.36 48.72
BE:245 [ILE] B5:4677 [A] 3.41 48.72
BE:249 [ARG] B5:4677 [A] 4.16 79.35
BE:249 [ARG] B5:4679 [C] 3.04 sugar:SC 79.35
BE:250 [LYS] B5:4677 [A] 3.51 69.09
BE:253 [GLN] B5:4677 [A] 3.89 91.04
BE:265 [LYS] B5:4671 [U] 3.33 B5:4626 [C] 49.31
BE:265 [LYS] B5:4672 [C] 3.04 B5:4625 [C] 49.31
BE:267 [VAL] B5:4670 [G] 4.91 B5:4627 [C] 50.59
BE:268 [PRO] B5:4670 [G] 3.94 B5:4627 [C] 59.58
BE:269 [GLN] B5:4668 [C] 4.16 B5:4629 [G] 0.0
BE:269 [GLN] B5:4669 [C] 2.82 B5:4628 [G] 0.0
BE:269 [GLN] B5:4670 [G] 2.89 B5:4627 [C] 0.0
BE:270 [LEU] B5:4670 [G] 4.79 B5:4627 [C] 74.93
BE:271 [GLN] B5:4670 [G] 3.76 B5:4627 [C] 27.95
BE:271 [GLN] B5:4671 [U] 2.77 B5:4626 [C] 27.95
BE:275 [ARG] B5:4622 [C] 3.3 B5:4675 [G] base/AA stacks 45.06
BE:275 [ARG] B5:4623 [G] 2.68 B5:4674 [C] base:SC 45.06
BE:275 [ARG] B5:4624 [U] 3.54 B5:4673 [A] 45.06
BE:276 [SER] B5:4622 [C] 3.56 B5:4675 [G] 76.64
BE:277 [VAL] B5:4622 [C] 2.86 B5:4675 [G] 52.93
BE:280 [LEU] B5:4501 [G] 4.05 B5:4618 [C] 92.66
BE:281 [THR] B5:4501 [G] 3.42 B5:4618 [C] 58.54
BE:281 [THR] B5:4620 [U] 4.48 58.54
BE:282 [ASN] B5:4501 [G] 3.09 B5:4618 [C] base:BB base/AA stacks 67.41
BE:282 [ASN] B5:4502 [G] 3.0 B5:4617 [C] base:SC 67.41

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group48 7O7Y_BE_B5 BE: 60s ribosomal protein l6, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) G1SKF7 SH3 Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 2

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_F_1 7O7Y_BE_B5 0.26 0.92 2.11 0.12 SH3 Eukaryotic large subunit ribosomal RNA compare
6AZ3_F_6 7O7Y_BE_B5 0.58 0.78 1.58 0.35 SH3 compare