RNAprotDB

Contacts -

6AZ3_K	6AZ3_1	Distance	Base Pair	Hbond nuc:res	Base Stacking	Residue conservation
K:75 [ARG]	1:1240 [U]	4.42	1:1386 [A]			17.3
K:75 [ARG]	1:1241 [A]	2.13	1:1385 [A]			17.3
K:75 [ARG]	1:1242 [U]	2.86		base:SC		17.3
K:75 [ARG]	1:1389 [A]	4.78				17.3
K:76 [GLY]	1:1242 [U]	3.99				98.2
K:76 [GLY]	1:1389 [A]	4.19				98.2
K:77 [PRO]	1:1242 [U]	4.97				61.1
K:77 [PRO]	1:1389 [A]	3.87				61.1
K:77 [PRO]	1:1390 [G]	3.34				61.1
K:77 [PRO]	1:1391 [U]	3.64				61.1
K:78 [ARG]	1:1390 [G]	4.18				40.9
K:78 [ARG]	1:1391 [U]	3.28			base/AA stacks	40.9
K:92 [ASN]	1:1243 [G]	4.88	1:1384 [C]			86.0
K:92 [ASN]	1:1244 [G]	2.88	1:1383 [C]			86.0
K:92 [ASN]	1:1245 [G]	3.62	1:1382 [C]			86.0
K:93 [ARG]	1:1390 [G]	4.17				90.1
K:103 [LYS]	1:543 [G]	3.99				67.4
K:103 [LYS]	1:1391 [U]	3.23				67.4
K:103 [LYS]	1:1392 [G]	2.74		base:SC		67.4
K:105 [TRP]	1:1391 [U]	3.05				6.4
K:105 [TRP]	1:1392 [G]	3.77				6.4
K:107 [HIS]	1:1390 [G]	3.63				66.6
K:107 [HIS]	1:1391 [U]	3.28				66.6
K:108 [VAL]	1:1390 [G]	2.99		sugar:BB		73.5
K:109 [GLN]	1:1242 [U]	4.57				61.9
K:109 [GLN]	1:1390 [G]	4.33				61.9
K:110 [ASN]	1:1242 [U]	3.42				73.8
K:110 [ASN]	1:1243 [G]	3.03	1:1384 [C]			73.8
K:110 [ASN]	1:1244 [G]	3.76	1:1383 [C]			73.8
K:112 [LYS]	1:1242 [U]	3.98				70.6
K:112 [LYS]	1:1244 [G]	3.49	1:1383 [C]			70.6
K:113 [ASN]	1:1242 [U]	3.34				75.7
K:124 [SER]	1:527 [A]	3.91		base:SC		35.4
K:124 [SER]	1:528 [A]	3.58	1:523 [G]			35.4
K:125 [ARG]	1:528 [A]	3.84	1:523 [G]			67.9
K:125 [ARG]	1:529 [A]	4.82	1:522 [G]			67.9
K:126 [ASN]	1:529 [A]	2.46	1:522 [G]	sugar:SC		57.6
K:126 [ASN]	1:530 [U]	3.97	1:521 [G]			57.6

Export the table of contacts

*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

RNAprotDB

Interface analysis

Style

Color

View

Interface

Contacts -

Properties of this interface

Interologs