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All interfaces > All interologs > Interface groups > group49 > 7O7Y_BM_B5

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Chain
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Conservation*

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Rim - Core

Contacts -

7O7Y_BM
7O7Y_B5
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BM:2 [VAL] B5:4511 [A] 3.87 36.39
BM:2 [VAL] B5:4512 [G] 3.65 36.39
BM:3 [PHE] B5:4511 [A] 3.38 43.21
BM:4 [ARG] B5:4512 [G] 2.66 base:SC 39.73
BM:4 [ARG] B5:4608 [U] 3.78 39.73
BM:5 [ARG] B5:4609 [G] 2.76 66.61
BM:9 [VAL] B5:743 [G] 4.95 68.11
BM:16 [SER] B5:1860 [C] 3.64 47.95
BM:17 [PHE] B5:1860 [C] 3.21 base/AA stacks 5.62
BM:19 [PRO] B5:836 [C] 3.34 40.64
BM:20 [HIS] B5:834 [A] 4.99 22.52
BM:20 [HIS] B5:836 [C] 3.27 sugar:SC 22.52
BM:20 [HIS] B5:837 [U] 3.27 B5:726 [A] 22.52
BM:23 [LYS] B5:834 [A] 3.91 77.57
BM:23 [LYS] B5:835 [G] 2.38 77.57
BM:29 [ASP] B5:743 [G] 3.09 base:SC, base:SC, base:SC 80.34
BM:30 [VAL] B5:743 [G] 4.85 81.79
BM:33 [GLN] B5:1864 [G] 4.29 B5:1998 [C] 52.35
BM:34 [ASN] B5:1863 [C] 3.01 B5:1999 [G] 84.09
BM:34 [ASN] B5:1864 [G] 2.62 B5:1998 [C] 84.09
BM:39 [ASP] B5:834 [A] 4.87 85.48
BM:40 [GLY] B5:834 [A] 3.92 83.2
BM:41 [PRO] B5:834 [A] 3.99 80.25
BM:44 [ARG] B5:834 [A] 3.31 43.65
BM:44 [ARG] B5:835 [G] 2.47 43.65
BM:45 [VAL] B5:834 [A] 3.17 89.28
BM:46 [ARG] B5:832 [G] 3.42 B5:829 [G] sugar:SC 32.69
BM:46 [ARG] B5:834 [A] 3.39 base/AA stacks 32.69
BM:46 [ARG] B5:836 [C] 4.52 32.69
BM:46 [ARG] B5:837 [U] 3.13 B5:726 [A] base/AA stacks 32.69
BM:47 [ARG] B5:837 [U] 4.44 B5:726 [A] 99.0
BM:48 [GLN] B5:836 [C] 4.17 72.15
BM:48 [GLN] B5:837 [U] 2.93 B5:726 [A] 72.15
BM:53 [LYS] B5:1862 [A] 3.03 B5:2000 [U] 76.22
BM:53 [LYS] B5:1863 [C] 2.79 B5:1999 [G] 76.22
BM:55 [MET] B5:4609 [G] 4.2 55.7
BM:56 [GLN] B5:4609 [G] 2.96 sugar:SC base/AA stacks 62.79
BM:57 [LEU] B5:4609 [G] 4.55 88.74
BM:65 [PRO] B5:814 [A] 3.22 B5:811 [U] 24.88
BM:65 [PRO] B5:815 [G] 3.32 B5:741 [A] 24.88
BM:66 [HIS] B5:743 [G] 3.46 sugar:SC base/AA stacks 61.53
BM:66 [HIS] B5:815 [G] 4.58 B5:741 [A] 61.53
BM:67 [SER] B5:816 [C] 3.76 B5:740 [G] 38.88
BM:68 [ALA] B5:815 [G] 3.79 B5:741 [A] 60.91
BM:68 [ALA] B5:816 [C] 4.13 B5:740 [G] 60.91
BM:69 [ARG] B5:729 [G] 3.86 B5:827 [C] 58.72
BM:69 [ARG] B5:730 [C] 4.05 B5:826 [G] 58.72
BM:69 [ARG] B5:733 [C] 3.25 58.72
BM:69 [ARG] B5:734 [G] 2.69 B5:822 [C] 58.72
BM:69 [ARG] B5:815 [G] 4.56 B5:741 [A] 58.72
BM:69 [ARG] B5:816 [C] 3.24 B5:740 [G] 58.72
BM:70 [GLN] B5:728 [G] 4.16 B5:828 [A] 66.81
BM:70 [GLN] B5:729 [G] 3.47 B5:827 [C] 66.81
BM:70 [GLN] B5:730 [C] 4.75 B5:826 [G] 66.81
BM:70 [GLN] B5:834 [A] 3.3 base:SC 66.81
BM:71 [LYS] B5:729 [G] 4.42 B5:827 [C] 45.27
BM:71 [LYS] B5:730 [C] 3.6 B5:826 [G] 45.27
BM:71 [LYS] B5:731 [C] 3.15 B5:825 [G] 45.27
BM:71 [LYS] B5:732 [C] 4.87 45.27
BM:71 [LYS] B5:733 [C] 3.11 45.27
BM:71 [LYS] B5:734 [G] 2.37 B5:822 [C] 45.27
BM:72 [TYR] B5:733 [C] 2.81 sugar:SC 34.99
BM:72 [TYR] B5:815 [G] 3.05 B5:741 [A] 34.99
BM:72 [TYR] B5:816 [C] 3.51 B5:740 [G] 34.99
BM:74 [ARG] B5:730 [C] 4.36 B5:826 [G] 31.36
BM:74 [ARG] B5:834 [A] 4.84 31.36
BM:75 [LYS] B5:733 [C] 4.88 53.52
BM:75 [LYS] B5:815 [G] 3.66 B5:741 [A] 53.52
BM:90 [ARG] B5:4606 [G] 4.95 B5:4514 [C] 19.57
BM:90 [ARG] B5:4607 [G] 3.44 B5:4513 [C] 19.57
BM:90 [ARG] B5:4608 [U] 3.19 19.57
BM:91 [TRP] B5:4608 [U] 4.4 2.85
BM:91 [TRP] B5:4609 [G] 3.51 2.85
BM:91 [TRP] B5:4610 [C] 4.33 2.85
BM:94 [LYS] B5:4608 [U] 4.0 69.57
BM:94 [LYS] B5:4609 [G] 4.33 69.57
BM:94 [LYS] B5:4610 [C] 3.05 69.57
BM:94 [LYS] B5:4611 [G] 2.54 69.57
BM:97 [ALA] B5:4611 [G] 3.86 45.7
BM:98 [ARG] B5:4609 [G] 4.9 42.16
BM:98 [ARG] B5:4610 [C] 3.66 42.16
BM:98 [ARG] B5:4611 [G] 3.7 42.16
BM:98 [ARG] B5:4615 [A] 2.99 base/AA stacks 42.16
BM:101 [LYS] B5:4616 [G] 2.73 B5:4503 [C] 77.82
BM:101 [LYS] B5:4617 [C] 3.28 B5:4502 [G] 77.82
BM:110 [TYR] B5:4669 [C] 4.56 B5:4628 [G] 80.41
BM:113 [MET] B5:4620 [U] 3.41 53.08
BM:113 [MET] B5:4621 [U] 3.99 53.08
BM:114 [LYS] B5:4621 [U] 4.23 24.47
BM:114 [LYS] B5:4668 [C] 2.62 B5:4629 [G] 24.47
BM:114 [LYS] B5:4669 [C] 3.63 B5:4628 [G] 24.47
BM:116 [LYS] B5:4617 [C] 4.92 B5:4502 [G] 71.93
BM:116 [LYS] B5:4618 [C] 3.38 B5:4501 [G] 71.93
BM:116 [LYS] B5:4619 [C] 4.69 71.93
BM:116 [LYS] B5:4620 [U] 4.61 71.93
BM:117 [LYS] B5:4620 [U] 3.7 69.91
BM:117 [LYS] B5:4621 [U] 2.71 69.91
BM:117 [LYS] B5:4667 [C] 3.31 B5:4630 [G] 69.91
BM:117 [LYS] B5:4668 [C] 3.19 B5:4629 [G] 69.91
BM:118 [MET] B5:4630 [G] 3.33 B5:4667 [C] 37.31
BM:118 [MET] B5:4631 [A] 4.33 37.31
BM:118 [MET] B5:4667 [C] 3.16 B5:4630 [G] 37.31
BM:118 [MET] B5:4668 [C] 3.21 B5:4629 [G] 37.31
BM:120 [ASN] B5:4618 [C] 2.73 B5:4501 [G] 81.01
BM:120 [ASN] B5:4619 [C] 2.95 81.01
BM:121 [ARG] B5:4620 [U] 3.71 13.08
BM:121 [ARG] B5:4666 [G] 4.83 13.08
BM:121 [ARG] B5:4667 [C] 3.33 B5:4630 [G] 13.08
BM:122 [ILE] B5:4631 [A] 3.75 37.91
BM:122 [ILE] B5:4632 [A] 4.49 37.91
BM:124 [LYS] B5:4619 [C] 3.55 47.57
BM:125 [ASN] B5:4632 [A] 3.3 0.0
BM:125 [ASN] B5:4633 [A] 3.87 0.0
BM:125 [ASN] B5:4634 [U] 4.85 0.0
BM:125 [ASN] B5:4635 [G] 4.79 B5:4663 [C] 0.0
BM:128 [LYS] B5:4636 [G] 4.82 B5:4662 [U] 3.36
BM:128 [LYS] B5:4656 [C] 4.69 B5:4643 [G] 3.36
BM:129 [LYS] B5:4632 [A] 4.66 31.4
BM:129 [LYS] B5:4633 [A] 3.34 31.4
BM:129 [LYS] B5:4634 [U] 3.44 31.4
BM:131 [GLN] B5:4656 [C] 4.64 B5:4643 [G] 45.91
BM:132 [ARG] B5:4634 [U] 3.22 35.75
BM:132 [ARG] B5:4635 [G] 3.63 B5:4663 [C] 35.75
BM:135 [LEU] B5:4656 [C] 4.76 B5:4643 [G] 16.03

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group49 7O7Y_BM_B5 BM: Ribosomal protein l14, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) G1SZ12 SH3 Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 2

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_K_6 7O7Y_BM_B5 0.57 0.74 2.56 0.05 SH3 compare
6AZ3_K_1 7O7Y_BM_B5 0.14 0.91 1.48 0.18 SH3 Eukaryotic large subunit ribosomal RNA compare